assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000010745.1_ASM1074v1	NC_013353	Escherichia coli O103:H2 str. 12009, complete genome	1	68417-68532	1	CRISPRCasFinder	no		DEDDh,DinG,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cse2gr11,cas8e,PrimPol,PD-DExK,WYL	Orphan	GATAAGACGCGCCAGCGTCGCATCAGGCGTT	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cse2gr11,cas8e,PrimPol,PD-DExK,WYL	NA,NA	NA|126aa|up_9|NC_013353.1_54421_54799_-	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|274aa|up_8|NC_013353.1_54801_55623_-	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|330aa|up_7|NC_013353.1_55619_56609_-	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|429aa|up_6|NC_013353.1_56608_57895_-	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|785aa|up_5|NC_013353.1_57947_60302_-	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|272aa|up_4|NC_013353.1_60556_61372_+	PRK09430, djlA, co-chaperone DjlA	NA|220aa|up_3|NC_013353.1_61488_62148_-	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|969aa|up_2|NC_013353.1_62159_65066_-	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|784aa|up_1|NC_013353.1_65230_67582_-	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|232aa|up_0|NC_013353.1_67656_68352_-	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|501aa|down_0|NC_013353.1_68551_70054_-	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|567aa|down_1|NC_013353.1_70064_71765_-	PRK04123, PRK04123, ribulokinase; Provisional	NA|293aa|down_2|NC_013353.1_72103_72982_+	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|255aa|down_3|NC_013353.1_73067_73832_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|233aa|down_4|NC_013353.1_73945_74644_-	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|537aa|down_5|NC_013353.1_74627_76238_-	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|328aa|down_6|NC_013353.1_76213_77197_-	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|552aa|down_7|NC_013353.1_77360_79016_-	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|44aa|down_8|NC_013353.1_79104_79236_+	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|393aa|down_9|NC_013353.1_79337_80516_+	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter
GCF_000010745.1_ASM1074v1	NC_013353	Escherichia coli O103:H2 str. 12009, complete genome	2	3344751-3345206	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cse2gr11,cas8e,cas3	DEDDh,DinG,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cse2gr11,cas8e,PrimPol,PD-DExK,WYL	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	7,7,7	7	TypeI-E	DEDDh,DinG,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cse2gr11,cas8e,PrimPol,PD-DExK,WYL	NA,NA	NA|254aa|up_9|NC_013353.1_3336563_3337325_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NC_013353.1_3337305_3338355_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NC_013353.1_3338351_3338831_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NC_013353.1_3338830_3339541_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NC_013353.1_3339559_3339871_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NC_013353.1_3340064_3340388_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NC_013353.1_3340437_3341043_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NC_013353.1_3341042_3342470_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NC_013353.1_3342471_3343380_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NC_013353.1_3343631_3344669_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NC_013353.1_3345302_3345596_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NC_013353.1_3345595_3346516_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NC_013353.1_3346512_3347163_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NC_013353.1_3347144_3347891_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cse2gr11|178aa|down_4|NC_013353.1_3348989_3349523_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|521aa|down_5|NC_013353.1_3349519_3351082_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_6|NC_013353.1_3351179_3353879_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_7|NC_013353.1_3354072_3354225_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_8|NC_013353.1_3354489_3355224_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_9|NC_013353.1_3355297_3357010_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
GCF_000010745.1_ASM1074v1	NC_013353	Escherichia coli O103:H2 str. 12009, complete genome	3	3370924-3371440	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3	DEDDh,DinG,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cse2gr11,cas8e,PrimPol,PD-DExK,WYL	Unclear	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	8,8,8	8	Unclear	DEDDh,DinG,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cse2gr11,cas8e,PrimPol,PD-DExK,WYL	NA,NA|47aa|down_1|NC_013353.1_3372589_3372730_+	NA|424aa|up_9|NC_013353.1_3359567_3360839_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|NC_013353.1_3360829_3361090_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|NC_013353.1_3361106_3361682_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|NC_013353.1_3361829_3362690_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NC_013353.1_3362686_3363466_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|470aa|up_4|NC_013353.1_3363443_3364853_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NC_013353.1_3364874_3366329_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NC_013353.1_3366398_3367184_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NC_013353.1_3367501_3368779_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NC_013353.1_3368805_3370284_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NC_013353.1_3371779_3372451_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|47aa|down_1|NC_013353.1_3372589_3372730_+	NA	NA|433aa|down_2|NC_013353.1_3373675_3374974_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_3|NC_013353.1_3375061_3376699_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_4|NC_013353.1_3376926_3377718_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_5|NC_013353.1_3377788_3378124_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_6|NC_013353.1_3378123_3378372_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_7|NC_013353.1_3378449_3380684_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_8|NC_013353.1_3380731_3382033_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_9|NC_013353.1_3382089_3384846_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional
