assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000013765.1_ASM1376v1	NC_007954	Shewanella denitrificans OS217, complete genome	1	950919-951019	1	CRISPRCasFinder	no		csa3,cas3,PD-DExK,DEDDh,DinG	Orphan	ATTGCCATGTTGGACAACCGATAAC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,PD-DExK,DEDDh,DinG	NA|116aa|up_8|NC_007954.1_941219_941567_+,NA|61aa|down_7|NC_007954.1_962696_962879_-	NA|364aa|up_9|NC_007954.1_938056_939148_+	PRK09601, PRK09601, redox-regulated ATPase YchF	NA|116aa|up_8|NC_007954.1_941219_941567_+	NA	NA|264aa|up_7|NC_007954.1_941626_942418_+	cd16301, IMP_DIM-like_MBL-B1, IMP-1, DIM-1, GIM-1, SIM-1, TMB-1 and related metallo-beta-lactamases, subclass B1; MBL-fold metallo-hydrolase domain	NA|431aa|up_6|NC_007954.1_942611_943904_+	PRK06084, PRK06084, bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA|729aa|up_5|NC_007954.1_944094_946281_+	TIGR03549, TIGR03549, YcaO domain protein	NA|157aa|up_4|NC_007954.1_946602_947073_-	PRK05066, PRK05066, transcriptional regulator ArgR	NA|312aa|up_3|NC_007954.1_947351_948287_+	PRK05086, PRK05086, malate dehydrogenase; Provisional	NA|251aa|up_2|NC_007954.1_948368_949121_+	PRK06483, PRK06483, dihydromonapterin reductase; Provisional	NA|231aa|up_1|NC_007954.1_949498_950191_-	PRK10333, PRK10333, 5-formyltetrahydrofolate cyclo-ligase family protein; Provisional	NA|103aa|up_0|NC_007954.1_950499_950808_-	pfam05164, ZapA, Cell division protein ZapA	NA|192aa|down_0|NC_007954.1_951170_951746_+	PRK01736, PRK01736, hypothetical protein; Reviewed	NA|422aa|down_1|NC_007954.1_951781_953047_+	TIGR01984, 2-polyprenyl-6-methoxyphenol_hydroxylase, 2-polyprenyl-6-methoxyphenol 4-hydroxylase	NA|406aa|down_2|NC_007954.1_953123_954341_+	PRK08850, PRK08850, 2-octaprenyl-6-methoxyphenol hydroxylase; Validated	NA|365aa|down_3|NC_007954.1_954578_955673_+	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT	NA|130aa|down_4|NC_007954.1_955751_956141_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|963aa|down_5|NC_007954.1_956360_959249_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|358aa|down_6|NC_007954.1_960046_961120_+	pfam04245, NA37, 37-kD nucleoid-associated bacterial protein	NA|61aa|down_7|NC_007954.1_962696_962879_-	NA	NA|506aa|down_8|NC_007954.1_963342_964860_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|236aa|down_9|NC_007954.1_965238_965946_-	pfam14329, DUF4386, Domain of unknown function (DUF4386)
GCF_000013765.1_ASM1376v1	NC_007954	Shewanella denitrificans OS217, complete genome	2	2264497-2264596	2	CRISPRCasFinder	no		csa3,cas3,PD-DExK,DEDDh,DinG	Orphan	TAGGGAAAACATAACCCTCAGCCCA	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,PD-DExK,DEDDh,DinG	NA|236aa|up_3|NC_007954.1_2259884_2260592_-,NA|326aa|up_1|NC_007954.1_2262133_2263111_-,NA|202aa|up_0|NC_007954.1_2263248_2263854_-,NA|117aa|down_9|NC_007954.1_2290737_2291088_-	NA|510aa|up_9|NC_007954.1_2248891_2250421_+	PRK15465, pabB, aminodeoxychorismate synthase component 1	NA|596aa|up_8|NC_007954.1_2250616_2252404_-	pfam11999, DUF3494, Protein of unknown function (DUF3494)	NA|483aa|up_7|NC_007954.1_2252859_2254308_-	pfam11999, DUF3494, Protein of unknown function (DUF3494)	NA|272aa|up_6|NC_007954.1_2254524_2255340_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|304aa|up_5|NC_007954.1_2255351_2256263_-	cd17551, REC_RpfG-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase response regulator RpfG and similar proteins	NA|954aa|up_4|NC_007954.1_2256322_2259184_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|236aa|up_3|NC_007954.1_2259884_2260592_-	NA	NA|452aa|up_2|NC_007954.1_2260582_2261938_-	PRK02224, PRK02224, DNA double-strand break repair Rad50 ATPase	NA|326aa|up_1|NC_007954.1_2262133_2263111_-	NA	NA|202aa|up_0|NC_007954.1_2263248_2263854_-	NA	NA|467aa|down_0|NC_007954.1_2279500_2280901_-	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily	NA|493aa|down_1|NC_007954.1_2280897_2282376_-	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily	NA|583aa|down_2|NC_007954.1_2282375_2284124_-	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily	NA|382aa|down_3|NC_007954.1_2284232_2285378_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|296aa|down_4|NC_007954.1_2285897_2286785_-	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|174aa|down_5|NC_007954.1_2287175_2287697_-	pfam07799, DUF1643, Protein of unknown function (DUF1643)	NA|275aa|down_6|NC_007954.1_2288470_2289295_-	pfam12833, HTH_18, Helix-turn-helix domain	NA|117aa|down_7|NC_007954.1_2289436_2289787_-	cd07238, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|73aa|down_8|NC_007954.1_2289830_2290049_-	pfam14117, DUF4287, Domain of unknown function (DUF4287)	NA|117aa|down_9|NC_007954.1_2290737_2291088_-	NA
GCF_000013765.1_ASM1376v1	NC_007954	Shewanella denitrificans OS217, complete genome	3	4174136-4174243	3	CRISPRCasFinder	no	cas3	csa3,cas3,PD-DExK,DEDDh,DinG	Unclear	ATTATTGACCCAGTGCGCTTAAGGC	25	0	0	NA	NA	NA	1	1	Unclear	csa3,cas3,PD-DExK,DEDDh,DinG	NA|319aa|up_5|NC_007954.1_4166896_4167853_-,NA|97aa|down_1|NC_007954.1_4177288_4177579_-,NA|152aa|down_4|NC_007954.1_4181221_4181677_-,NA|98aa|down_8|NC_007954.1_4184991_4185285_+,NA|237aa|down_9|NC_007954.1_4185357_4186068_-	NA|309aa|up_9|NC_007954.1_4163851_4164778_+	pfam11219, DUF3014, Protein of unknown function (DUF3014)	NA|198aa|up_8|NC_007954.1_4164860_4165454_-	PRK00170, PRK00170, azoreductase; Reviewed	NA|160aa|up_7|NC_007954.1_4165663_4166143_-	pfam04314, PCuAC, Copper chaperone PCu(A)C	NA|205aa|up_6|NC_007954.1_4166216_4166831_-	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold	NA|319aa|up_5|NC_007954.1_4166896_4167853_-	NA	NA|392aa|up_4|NC_007954.1_4167941_4169117_-	TIGR02376, Copper-containing_nitrite_reductase, nitrite reductase, copper-containing	NA|355aa|up_3|NC_007954.1_4169388_4170453_-	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|154aa|up_2|NC_007954.1_4170590_4171052_+	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL	NA|503aa|up_1|NC_007954.1_4171186_4172695_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|442aa|up_0|NC_007954.1_4172694_4174020_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|264aa|down_0|NC_007954.1_4176395_4177187_-	sd00045, ANK, ankyrin repeats	NA|97aa|down_1|NC_007954.1_4177288_4177579_-	NA	NA|55aa|down_2|NC_007954.1_4177680_4177845_-	cd04278, ZnMc_MMP, Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family	NA|387aa|down_3|NC_007954.1_4179901_4181061_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|152aa|down_4|NC_007954.1_4181221_4181677_-	NA	NA|229aa|down_5|NC_007954.1_4181704_4182391_-	pfam03942, DTW, DTW domain	NA|403aa|down_6|NC_007954.1_4182503_4183712_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|323aa|down_7|NC_007954.1_4183824_4184793_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|98aa|down_8|NC_007954.1_4184991_4185285_+	NA	NA|237aa|down_9|NC_007954.1_4185357_4186068_-	NA
