assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000014285.2_ASM1428v2	NC_008343	Granulibacter bethesdensis CGDNIH1, complete sequence	1	1523030-1525193	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,DinG	Type I-E	CGGTTCATCCCCGCGCAGGCGGGGAACAC,CGGTTCATCCCCGCGCAGGCGGGGAACAC,CGGTTCATCCCCGCGCAGGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	35,35,35	35	TypeI-E	csa3,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,DinG	NA|53aa|up_7|NC_008343.2_1515537_1515696_-,NA	NA|190aa|up_9|NC_008343.2_1514722_1515292_+	pfam06242, DUF1013, Protein of unknown function (DUF1013)	NA|61aa|up_8|NC_008343.2_1515377_1515560_-	pfam04325, DUF465, Protein of unknown function (DUF465)	NA|53aa|up_7|NC_008343.2_1515537_1515696_-	NA	NA|68aa|up_6|NC_008343.2_1515775_1515979_+	COG5481, COG5481, Uncharacterized conserved small protein containing a coiled-coil domain [Function unknown]	NA|174aa|up_5|NC_008343.2_1515983_1516505_+	pfam00731, AIRC, AIR carboxylase	NA|380aa|up_4|NC_008343.2_1516514_1517654_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|405aa|up_3|NC_008343.2_1517849_1519064_+	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|274aa|up_2|NC_008343.2_1519105_1519927_+	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|65aa|up_1|NC_008343.2_1520001_1520196_-	pfam01679, Pmp3, Proteolipid membrane potential modulator	NA|881aa|up_0|NC_008343.2_1520291_1522934_-	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	cas2|96aa|down_0|NC_008343.2_1525264_1525552_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|316aa|down_1|NC_008343.2_1525548_1526496_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|228aa|down_2|NC_008343.2_1526495_1527179_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|226aa|down_3|NC_008343.2_1527180_1527858_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|355aa|down_4|NC_008343.2_1527854_1528919_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|166aa|down_5|NC_008343.2_1528918_1529416_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|486aa|down_6|NC_008343.2_1529412_1530870_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|833aa|down_7|NC_008343.2_1531243_1533742_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|148aa|down_8|NC_008343.2_1534790_1535234_-	PRK06848, PRK06848, cytidine deaminase	NA|352aa|down_9|NC_008343.2_1535253_1536309_-	PRK09354, recA, recombinase A; Provisional
GCF_000014285.2_ASM1428v2	NC_008343	Granulibacter bethesdensis CGDNIH1, complete sequence	2	1534139-1534715	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,DinG	Type I-E	GGTTCCCCCGCGTGCGCGGGGATAGTCC,GGACTATCCCCGCGCACGCGGGGGAACC,GGACTATCCCCGCGCACGCGGGGGAACC	28,28,28	0	0	NA	NA	NA:NA:NA	9,9,9	9	TypeI-E	csa3,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,DinG	NA,NA|81aa|down_6|NC_008343.2_1540203_1540446_-,NA|307aa|down_7|NC_008343.2_1540453_1541374_+,NA|72aa|down_8|NC_008343.2_1541804_1542020_-	NA|65aa|up_9|NC_008343.2_1520001_1520196_-	pfam01679, Pmp3, Proteolipid membrane potential modulator	NA|881aa|up_8|NC_008343.2_1520291_1522934_-	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	cas2|96aa|up_7|NC_008343.2_1525264_1525552_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|316aa|up_6|NC_008343.2_1525548_1526496_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|228aa|up_5|NC_008343.2_1526495_1527179_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|226aa|up_4|NC_008343.2_1527180_1527858_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|355aa|up_3|NC_008343.2_1527854_1528919_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|166aa|up_2|NC_008343.2_1528918_1529416_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|486aa|up_1|NC_008343.2_1529412_1530870_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|833aa|up_0|NC_008343.2_1531243_1533742_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|148aa|down_0|NC_008343.2_1534790_1535234_-	PRK06848, PRK06848, cytidine deaminase	NA|352aa|down_1|NC_008343.2_1535253_1536309_-	PRK09354, recA, recombinase A; Provisional	NA|163aa|down_2|NC_008343.2_1536645_1537134_+	TIGR03330, SAM_DCase_Bsu, S-adenosylmethionine decarboxylase proenzyme, Bacillus form	NA|294aa|down_3|NC_008343.2_1537256_1538138_+	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|138aa|down_4|NC_008343.2_1538273_1538687_-	TIGR02420, RNA_polymerase-binding_transcription_factor_DksA, RNA polymerase-binding protein DksA	NA|323aa|down_5|NC_008343.2_1539144_1540113_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|81aa|down_6|NC_008343.2_1540203_1540446_-	NA	NA|307aa|down_7|NC_008343.2_1540453_1541374_+	NA	NA|72aa|down_8|NC_008343.2_1541804_1542020_-	NA	NA|177aa|down_9|NC_008343.2_1542061_1542592_+	PRK02853, PRK02853, hypothetical protein; Provisional
GCF_000014285.2_ASM1428v2	NC_008343	Granulibacter bethesdensis CGDNIH1, complete sequence	3	1832594-1835428	3,3,3	PILER-CR,CRISPRCasFinder,CRT	no		csa3,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,DinG	Orphan	GGTTCCTCCGCGTGCGCGGAGATAGACC,GGTCTATCTCCGCGCACGCGGAGGAACC,GGTCTATCTCCGCGCACGCGGAGGAACC	28,28,28	0	0	NA	NA	NA:NA:NA	46,46,46	46	Orphan	csa3,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,DinG	NA|77aa|up_8|NC_008343.2_1823162_1823393_+,NA	NA|616aa|up_9|NC_008343.2_1821295_1823143_+	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism]	NA|77aa|up_8|NC_008343.2_1823162_1823393_+	NA	NA|337aa|up_7|NC_008343.2_1823620_1824631_+	cd12834, ZntB_u1, Uncharacterized bacterial subgroup of the Salmonella typhimurium Zn2+ transporter ZntB-like subfamily	NA|306aa|up_6|NC_008343.2_1824747_1825665_+	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|254aa|up_5|NC_008343.2_1825709_1826471_-	PRK10621, PRK10621, hypothetical protein; Provisional	NA|330aa|up_4|NC_008343.2_1826647_1827637_-	pfam14613, DUF4449, Protein of unknown function (DUF4449)	NA|213aa|up_3|NC_008343.2_1827891_1828530_-	pfam04264, YceI, YceI-like domain	NA|342aa|up_2|NC_008343.2_1828792_1829818_+	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]	NA|249aa|up_1|NC_008343.2_1829942_1830689_+	cd02432, Nodulin-21_like_1, Nodulin-21 and CCC1-related protein family	NA|571aa|up_0|NC_008343.2_1830685_1832398_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|407aa|down_0|NC_008343.2_1835959_1837180_-	COG0617, PcnB, tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]	NA|219aa|down_1|NC_008343.2_1837197_1837854_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|180aa|down_2|NC_008343.2_1837857_1838397_-	pfam06938, DUF1285, Protein of unknown function (DUF1285)	NA|469aa|down_3|NC_008343.2_1838622_1840029_-	TIGR03173, pbuX, xanthine permease	NA|305aa|down_4|NC_008343.2_1840194_1841109_+	cd08426, PBP2_LTTR_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|343aa|down_5|NC_008343.2_1841195_1842224_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|300aa|down_6|NC_008343.2_1842235_1843135_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|955aa|down_7|NC_008343.2_1843148_1846013_+	pfam13709, DUF4159, Domain of unknown function (DUF4159)	NA|753aa|down_8|NC_008343.2_1846025_1848284_+	pfam07090, GATase1_like, Putative glutamine amidotransferase	NA|170aa|down_9|NC_008343.2_1848383_1848893_+	cd15904, TSPO_MBR, Translocator protein (TSPO)/peripheral-type benzodiazepine receptor (MBR) family
GCF_000014285.2_ASM1428v2	NC_008343	Granulibacter bethesdensis CGDNIH1, complete sequence	4	1917588-1919262	4,4,4,5	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	csa3,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,DinG	Type I-E	GGTTCCTCCGCGTGCGCGGAGATAGACC,GGTTCCTCCGCGTGCGCGGAGATAGACC,GGTTCCTCCGCGTGCGCGGAGATAGACC,GGTTCCTCCGCGTGCGCGGAGATAGACC	28,28,28,28	1	1	1918958-1918990	NC_008343.2_2648663-2648695	NA:NA:NA:NA	26,27,27,26	27	TypeI-E	csa3,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,DinG	NA,NA|63aa|down_4|NC_008343.2_1922667_1922856_-	NA|249aa|up_9|NC_008343.2_1907219_1907966_+	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|219aa|up_8|NC_008343.2_1907978_1908635_-	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	cas3|850aa|up_7|NC_008343.2_1908895_1911445_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|522aa|up_6|NC_008343.2_1911607_1913173_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|191aa|up_5|NC_008343.2_1913159_1913732_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|387aa|up_4|NC_008343.2_1913724_1914885_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|236aa|up_3|NC_008343.2_1914881_1915589_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|248aa|up_2|NC_008343.2_1915588_1916332_+	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas1|300aa|up_1|NC_008343.2_1916335_1917235_+	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas2|98aa|up_0|NC_008343.2_1917234_1917528_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|105aa|down_0|NC_008343.2_1919719_1920034_+	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|90aa|down_1|NC_008343.2_1920047_1920317_+	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|344aa|down_2|NC_008343.2_1920481_1921513_+	PRK12299, obgE, GTPase CgtA; Reviewed	NA|382aa|down_3|NC_008343.2_1921509_1922655_+	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|63aa|down_4|NC_008343.2_1922667_1922856_-	NA	NA|422aa|down_5|NC_008343.2_1923053_1924319_+	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|229aa|down_6|NC_008343.2_1924322_1925009_+	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase	NA|151aa|down_7|NC_008343.2_1925179_1925632_+	pfam02410, RsfS, Ribosomal silencing factor during starvation	NA|158aa|down_8|NC_008343.2_1925672_1926146_+	cd18081, RlmH-like, 23S-rRNA-pseudouridine1915-N3-methyltransferase RlmH	NA|503aa|down_9|NC_008343.2_1926279_1927788_+	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
