The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_008343	Granulibacter bethesdensis CGDNIH1, complete sequence	2708434	943128	952117	2708434		Acinetobacter_phage(50.0%)	9	NA	NA
WP_011631523.1|943128_943857_-	transcriptional repressor LexA	NA	A0A0N9RTK0	Paenibacillus_phage	37.7	1.9e-06
WP_011631524.1|943962_945165_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_050748407.1|945175_945697_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_095206549.1|945665_946556_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	46.2	7.1e-56
WP_011631527.1|946666_947707_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	37.4	6.8e-58
WP_025319228.1|947715_948330_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	52.4	1.3e-53
WP_011631529.1|948454_950113_-	glycosyltransferase family protein	NA	D6PFH9	uncultured_phage	26.0	3.5e-08
WP_011631530.1|950109_950571_-	DUF488 domain-containing protein	NA	NA	NA	NA	NA
WP_011631531.1|950578_952117_-	anthranilate synthase component I	NA	S4VNU7	Pandoravirus	39.4	1.4e-38
>prophage 2
NC_008343	Granulibacter bethesdensis CGDNIH1, complete sequence	2708434	1679726	1755669	2708434	bacteriocin,tail,plate,integrase,tRNA	Bacillus_phage(21.43%)	58	1685448:1685463	1715875:1715890
WP_011632201.1|1679726_1681031_-|tRNA	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB	tRNA	NA	NA	NA	NA
WP_011632202.1|1681027_1681855_-	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_011632203.1|1682123_1683614_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_011632204.1|1683820_1685101_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011632205.1|1685320_1685524_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
1685448:1685463	attL	AGAACCGTGGCAGCCA	NA	NA	NA	NA
WP_011632206.1|1685537_1685897_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_025318820.1|1686029_1687100_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	35.6	2.7e-25
WP_011632208.1|1687103_1689563_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_043452876.1|1689731_1691537_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.9	6.7e-21
WP_011632210.1|1691817_1692981_+|integrase	site-specific integrase	integrase	A0A077KET4	Ralstonia_phage	42.4	3.6e-76
WP_011632211.1|1693016_1694063_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072563944.1|1694178_1694385_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_011632212.1|1694491_1694950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080504543.1|1695234_1695519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025318819.1|1697373_1699086_+	relaxase domain-containing protein	NA	NA	NA	NA	NA
WP_025318818.1|1702031_1702286_+	type II toxin-antitoxin system HicA family toxin	NA	R4JMD3	Burkholderia_phage	45.2	1.0e-12
WP_011632219.1|1702282_1702615_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
WP_025318817.1|1702738_1704784_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
WP_011632221.1|1704776_1705976_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_025318816.1|1706107_1706767_+	sce7726 family protein	NA	NA	NA	NA	NA
WP_011632222.1|1706772_1707834_-	beta family protein	NA	NA	NA	NA	NA
WP_125911017.1|1708370_1708808_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157692010.1|1709577_1709787_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155760891.1|1710527_1710692_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025318813.1|1710748_1711006_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011632228.1|1711196_1712525_+|bacteriocin	NHLP bacteriocin system secretion protein	bacteriocin	NA	NA	NA	NA
WP_011632229.1|1712539_1714750_+|bacteriocin	NHLP family bacteriocin export ABC transporter peptidase/permease/ATPase subunit	bacteriocin	W8CYL7	Bacillus_phage	23.8	4.2e-25
WP_011632230.1|1714778_1717631_+|bacteriocin	NHLP bacteriocin export ABC transporter permease/ATPase subunit	bacteriocin	W8CYL7	Bacillus_phage	27.9	4.0e-28
1715875:1715890	attR	TGGCTGCCACGGTTCT	NA	NA	NA	NA
WP_011632232.1|1717915_1719382_-	UdgX family uracil-DNA binding protein	NA	A0A127AW33	Bacillus_phage	28.9	1.9e-10
WP_043454103.1|1719378_1720602_-	putative DNA modification/repair radical SAM protein	NA	NA	NA	NA	NA
WP_043454106.1|1720919_1721900_+	ADP-glyceromanno-heptose 6-epimerase	NA	M4QHP0	Synechococcus_phage	32.2	6.4e-26
WP_157692059.1|1721978_1724795_+	glycoside hydrolase family 99-like domain-containing protein	NA	NA	NA	NA	NA
WP_043452881.1|1724866_1726447_+	FkbM family methyltransferase	NA	G9E4U7	Ostreococcus_lucimarinus_virus	28.4	7.5e-08
WP_011632238.1|1726516_1727110_-	D-sedoheptulose 7-phosphate isomerase	NA	NA	NA	NA	NA
WP_043452886.1|1727424_1728816_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_011632240.1|1728919_1730755_-	Hint domain-containing protein	NA	NA	NA	NA	NA
WP_011632241.1|1730950_1733923_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_011632243.1|1734291_1734675_-	fluoride efflux transporter CrcB	NA	NA	NA	NA	NA
WP_011632244.1|1734713_1737854_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_157692060.1|1737873_1738974_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_025318803.1|1739304_1739892_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011632247.1|1739928_1741182_-	GTP-binding protein	NA	NA	NA	NA	NA
WP_011632248.1|1741445_1743491_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011632249.1|1743592_1743979_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050748444.1|1744013_1744559_-	hypothetical protein	NA	A0A191ZDK6	Acinetobacter_phage	39.4	2.6e-24
WP_011632251.1|1744591_1744915_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043452890.1|1744911_1745154_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011632252.1|1745138_1746131_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157692012.1|1746132_1746612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011632254.1|1746623_1748270_-|tail	tail fiber domain-containing protein	tail	A0A0C4K5Y2	Synechococcus_phage	36.9	3.7e-18
WP_043452892.1|1748319_1749639_-	DUF2612 domain-containing protein	NA	A0A291LB27	Pseudomonas_phage	23.8	1.4e-07
WP_011632256.1|1749881_1750484_-	hypothetical protein	NA	A0A291LBI1	Klebsiella_phage	27.9	3.2e-12
WP_011632257.1|1750505_1751531_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011632258.1|1751527_1752058_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011632259.1|1752184_1752715_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011632260.1|1752841_1753372_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157692013.1|1753584_1754109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011632263.1|1754205_1755669_-|plate	baseplate J/gp47 family protein	plate	A0A291AYU1	Shigella_phage	26.6	1.8e-40
>prophage 3
NC_008343	Granulibacter bethesdensis CGDNIH1, complete sequence	2708434	1765200	1773503	2708434	terminase	Pseudomonas_phage(50.0%)	11	NA	NA
WP_025286985.1|1765200_1765638_-	DUF3277 family protein	NA	A0A0A1IUI2	Pseudomonas_phage	33.6	9.9e-11
WP_011632276.1|1765673_1766750_-	DUF3383 family protein	NA	A0A0N9SJA3	Pseudomonas_phage	47.4	3.0e-69
WP_011632277.1|1766742_1767276_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011632278.1|1767288_1767654_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011632279.1|1767656_1767971_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011632280.1|1767970_1768363_-	DUF4054 domain-containing protein	NA	NA	NA	NA	NA
WP_011632281.1|1768366_1769317_-	DUF2184 domain-containing protein	NA	L7TMZ5	Rhizobium_phage	46.3	9.2e-70
WP_011632282.1|1769341_1769791_-	DUF2190 family protein	NA	NA	NA	NA	NA
WP_011632283.1|1769793_1770771_-	DUF2213 domain-containing protein	NA	E5AGA6	Erwinia_phage	37.2	7.5e-43
WP_011632284.1|1770798_1772040_-	DUF1073 domain-containing protein	NA	A0A0N9SI81	Pseudomonas_phage	29.3	1.6e-29
WP_011632285.1|1772072_1773503_-|terminase	phage terminase large subunit	terminase	J7I460	Acinetobacter_phage	37.2	3.5e-57
>prophage 4
NC_008343	Granulibacter bethesdensis CGDNIH1, complete sequence	2708434	1970699	2023991	2708434	protease,transposase	Agrobacterium_phage(16.67%)	43	NA	NA
WP_025287135.1|1970699_1973060_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	44.5	4.6e-179
WP_011632454.1|1973342_1974458_-	glycosyltransferase family 4 protein	NA	A0A2P0VNG4	Tetraselmis_virus	26.5	1.4e-08
WP_011632455.1|1974468_1976187_-	heparinase II/III family protein	NA	NA	NA	NA	NA
WP_043454260.1|1976321_1977644_-	rRNA cytosine-C5-methylase	NA	NA	NA	NA	NA
WP_011632457.1|1977766_1979467_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_157692023.1|1979576_1981349_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA	NA
WP_043454265.1|1981387_1982599_+	type II secretion system F family protein	NA	NA	NA	NA	NA
WP_011632460.1|1982595_1983063_+	GspH/FimT family pseudopilin	NA	NA	NA	NA	NA
WP_011632461.1|1983049_1983487_+	type II secretion system protein	NA	NA	NA	NA	NA
WP_011632462.1|1983483_1984101_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_011632463.1|1984097_1985255_+	PilN domain-containing protein	NA	NA	NA	NA	NA
WP_011632464.1|1985251_1985890_+	type II secretion system protein M	NA	NA	NA	NA	NA
WP_011632465.1|1985886_1986486_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011632466.1|1986657_1988322_+	general secretion pathway protein GspN	NA	NA	NA	NA	NA
WP_050748458.1|1988670_1990875_+	type II secretion system secretin GspD	NA	NA	NA	NA	NA
WP_162288475.1|1990949_1991771_+	general secretion pathway protein GspK	NA	NA	NA	NA	NA
WP_050748459.1|1991805_1992276_-	type II secretion system major pseudopilin GspG	NA	NA	NA	NA	NA
WP_011632470.1|1992371_1992776_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_157692024.1|1992868_1993927_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_011632472.1|1994109_1994364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043454276.1|1994720_1995707_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011632474.1|1995888_1996716_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_125911033.1|1996822_1997731_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011632476.1|1997727_1998159_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_043452968.1|1998246_1999026_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_157692063.1|1999330_2000197_+	DUF3829 domain-containing protein	NA	NA	NA	NA	NA
WP_025318659.1|2000456_2001131_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_080504546.1|2001207_2002152_+	aromatic alcohol reductase	NA	NA	NA	NA	NA
WP_011632481.1|2002174_2003326_+	epoxide hydrolase	NA	NA	NA	NA	NA
WP_025318657.1|2003847_2004477_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_011632485.1|2005649_2006552_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_043454285.1|2006648_2007485_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_043452970.1|2007835_2009035_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	45.9	3.7e-92
WP_025318655.1|2009138_2010125_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011632489.1|2010222_2011719_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011632490.1|2011796_2012279_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011632491.1|2012691_2013549_-	DUF4263 domain-containing protein	NA	Q858S8	Enterobacteria_phage	51.1	2.3e-27
WP_080504548.1|2013438_2014527_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	54.6	5.4e-74
WP_025318651.1|2016129_2016933_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011632494.1|2017088_2017970_-	NmrA family NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_095206540.1|2019170_2020404_+|transposase	IS3-like element ISGbe2 family transposase	transposase	A0A1B0Z042	Pseudomonas_phage	49.0	1.2e-66
WP_080504511.1|2020843_2022052_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_095206541.1|2022819_2023991_-|transposase	IS3-like element ISGbe1 family transposase	transposase	NA	NA	NA	NA
