bac_id	spacer_id	hit_phage_id	hit_phage_def	spacer_sequence	hit_phage_region	hit_phage_sequence	mismatch	coverage	hmm_mismatch
NC_009446	1.1|179037|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	NZ_CP019281	Escherichia coli strain 13P484A plasmid p13P484A-1, complete sequence	TATCAAAGAACCAGTCAAGGAACCATGAGTCG	30528-30559	AGTCAAAGAACCAGTCAATGAACCAATAGCTG	1	0.71875	7
NC_009446	1.1|179037|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	AP012536	Stx2-converting phage Stx2a_1447 proviral DNA, complete genome	TATCAAAGAACCAGTCAAGGAACCATGAGTCG	9299-9330	AGTCAAAGAACCAGTCAATGAACCAATAGCTG	1	0.71875	7
NC_009446	1.1|179037|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	JQ182728	Enterobacteria phage mEp460, complete genome	TATCAAAGAACCAGTCAAGGAACCATGAGTCG	34861-34892	AGTCAAAGAACCAGTCAATGAACCAATAGCTG	1	0.71875	7
NC_009446	1.1|179037|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	KF030445	Escherichia phage 1720a-02, complete genome	TATCAAAGAACCAGTCAAGGAACCATGAGTCG	36616-36647	CAGCTATTGGTTCATTGACTGGTTCTTTGACT	1	0.71875	7
NC_009446	1.1|179037|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	NC_003444	Enterobacteria phage SfV, complete genome	TATCAAAGAACCAGTCAAGGAACCATGAGTCG	28700-28731	AGTCAAAGAACCAGTCAATGAACCAATAGCTG	1	0.71875	7
NC_009446	1.1|179037|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	NC_049941	Stx2-converting phage Stx2a_WGPS2 proviral DNA, complete genome	TATCAAAGAACCAGTCAAGGAACCATGAGTCG	9299-9330	AGTCAAAGAACCAGTCAATGAACCAATAGCTG	1	0.71875	7
NC_009446	1.1|179037|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	U82619	Shigella flexneri bacteriophage V, complete genome	TATCAAAGAACCAGTCAAGGAACCATGAGTCG	28700-28731	AGTCAAAGAACCAGTCAATGAACCAATAGCTG	1	0.71875	7
NC_009446	1.1|179037|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	NC_009514	Phage cdtI DNA, complete genome	TATCAAAGAACCAGTCAAGGAACCATGAGTCG	37944-37975	AGTCAAAGAACCAGTCAATGAACCAATAGCTG	1	0.71875	7
NC_009446	1.1|179037|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	LR595862	Escherichia virus Lambda_2H10 genome assembly, chromosome: 1	TATCAAAGAACCAGTCAAGGAACCATGAGTCG	36240-36271	AGTCAAAGAACCAGTCAATGAACCAATAGCTG	1	0.71875	7
NC_009446	1.1|179037|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	NC_004313	Salmonella phage ST64B, complete genome	TATCAAAGAACCAGTCAAGGAACCATGAGTCG	31420-31451	AGTCAAAGAACCAGTCAATGAATCAAAAACCA	2	0.71875	9
NC_009446	1.1|179037|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	KU927493	Salmonella phage 118970_sal3, complete genome	TATCAAAGAACCAGTCAAGGAACCATGAGTCG	69032-69063	AGTCAAAGAACCAGTCAATGAATCAAAAACCA	2	0.71875	9
NC_009446	1.1|179037|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	MF807953	Escherichia phage Ayreon, complete genome	TATCAAAGAACCAGTCAAGGAACCATGAGTCG	35979-36010	AGTCAAAGAATCAGTCAATGAACCAATAGCTG	2	0.71875	8
NC_009446	1.1|179037|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	AY055382	Salmonella typhimurium phage ST64B complete sequence	TATCAAAGAACCAGTCAAGGAACCATGAGTCG	31420-31451	AGTCAAAGAACCAGTCAATGAATCAAAAACCA	2	0.71875	9
NC_009446	1.1|179037|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	MT225100	Escherichia phage Lys8385Vzw, complete genome	TATCAAAGAACCAGTCAAGGAACCATGAGTCG	36000-36031	AGTCAAAGAATCAGTCAATGAACCAATAGCTG	2	0.71875	8
NC_009446	1.3|179157|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	NC_049832	Escherichia phage vB_EcoS-DELF2 DNA, complete genome	TGTCGAACTAAACGATGACCAGATTTGGTTAA	16338-16369	CCTCATCAATCTGGTCATCGTTAAGTTCCACG	2	0.75	7
NC_009446	1.3|179157|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	MT682715	Escherichia phage vB_EcoS_Chapo, complete genome	TGTCGAACTAAACGATGACCAGATTTGGTTAA	698-729	CGTGGAACTTAACGATGACCAGATCGATGAGG	2	0.71875	8
NC_009446	1.4|179217|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	NZ_CP040760	Paracoccus sp. 2251 plasmid unnamed6, complete sequence	TATCGCAGCCACAGCGTCGCGCAAGTATTAGC	58645-58676	CCCAATGCCTGCGCGACGCTGTGGCTGCCGAC	2	0.78125	8
NC_009446	1.5|179277|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	GCCGCAACATTTCTGGCTCATTTAAATATAAG	62158-62189	AACCATTAATTTCTAGATCATTTAAATATAAA	2	0.71875	8
NC_009446	1.5|179277|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	NC_011247	Borrelia duttonii Ly plasmid pl165, complete sequence	GCCGCAACATTTCTGGCTCATTTAAATATAAG	100482-100513	AACCATTAATTTCTAGATCATTTAAATATAAA	2	0.71875	8
NC_009446	1.6|179337|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	NC_009517	Psychrobacter sp. PRwf-1 plasmid pRWF102, complete sequence	GTAAACCATCAAAATAACGTCAAATTGGGTTA	979-1010	TTTAACCATCAAAATAACGTGAAAATGTGGGT	2	0.75	8
NC_009446	1.7|179397|32|NC_009446|PILER-CR,CRISPRCasFinder,CRT	MT774401	CrAssphage cr6_1, complete genome	GCTATAGTTATCGAGTCCAGAAAAAATAAAGT	16098-16129	ACTTTATTTTTTCTAGACTCTATGTTAGCCTG	2	0.71875	7
NC_009446	2.1|315560|26|NC_009446|PILER-CR	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	AATCTCCACAACTACAATCTTTATCT	7434-7459	TGATACAGATTGTAGTTGTAGAGATA	2	0.9230769230769231	4
NC_009446	2.2|315608|26|NC_009446|PILER-CR	NZ_CP015734	Arthrobacter sp. U41 plasmid unnamed2, complete sequence	CATGTTCGCCGATGCAACCGCAGTTA	162075-162100	GCACTGCGGTTGCATCCGCGAACTCG	1	0.8076923076923077	5
NC_009446	2.3|315656|26|NC_009446|PILER-CR	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	AATCTCCACAACTACAATCTTTATCT	7434-7459	TGATACAGATTGTAGTTGTAGAGATA	2	0.9230769230769231	4
NC_009446	2.5|315752|26|NC_009446|PILER-CR	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	AATCTCCACAACTACAATCTTTATCT	7434-7459	TGATACAGATTGTAGTTGTAGAGATA	2	0.9230769230769231	4
