The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_008705	Mycobacterium sp. KMS, complete sequence	5737227	1534483	1600219	5737227	protease,transposase,integrase	Corynebacterium_phage(15.38%)	56	1546473:1546532	1598928:1600345
WP_011558824.1|1534483_1535875_-|protease	zinc-dependent metalloprotease	protease	NA	NA	NA	NA
WP_011768129.1|1535966_1536995_+	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_011558826.1|1537079_1540091_+	UPF0182 family protein	NA	NA	NA	NA	NA
WP_011558827.1|1540134_1543560_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_011558828.1|1543662_1545051_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_011558829.1|1545636_1546428_-	hypothetical protein	NA	NA	NA	NA	NA
1546473:1546532	attL	GGTCAAGTCCCGGGAAGTGGTGTAGTGCTGCGTGATCCGGTGGGTTAAGCGGTGAGTGCG	NA	NA	NA	NA
WP_011558258.1|1546516_1547764_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	42.4	5.8e-80
WP_011558830.1|1547883_1548201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153266286.1|1548426_1549209_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011558832.1|1549289_1550618_-|integrase	site-specific integrase	integrase	A0A1B0T6A8	Bacillus_phage	30.3	6.9e-47
WP_167535178.1|1550614_1550797_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011558833.1|1550789_1551599_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011558834.1|1552278_1553007_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011558835.1|1553046_1553301_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011558836.1|1553425_1553677_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011558837.1|1553855_1554434_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011558838.1|1554433_1556884_+	hypothetical protein	NA	V5UPQ7	Mycobacterium_phage	30.2	2.5e-18
WP_011558839.1|1556880_1557642_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011558840.1|1557710_1562282_-	relaxase domain-containing protein	NA	NA	NA	NA	NA
WP_011558841.1|1562486_1563053_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011558842.1|1563257_1563839_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011558843.1|1564122_1565097_-	sterol desaturase family protein	NA	NA	NA	NA	NA
WP_011558844.1|1565151_1565925_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011558845.1|1566172_1567258_+	C40 family peptidase	NA	A0A1W6DXV0	Rhodococcus_phage	44.3	1.1e-15
WP_011558846.1|1567440_1568280_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011558847.1|1568503_1569190_+	DUF305 domain-containing protein	NA	NA	NA	NA	NA
WP_011558848.1|1569205_1570390_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	27.1	7.0e-27
WP_011558849.1|1570386_1571184_-	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	31.2	4.2e-07
WP_153266287.1|1571167_1571476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011558850.1|1571506_1572910_-	NlpC/P60 family peptidoglycan endopeptidase RipA	NA	A0A1J0GW44	Streptomyces_phage	38.6	2.1e-14
WP_011558851.1|1573326_1573689_+	BlaI/MecI/CopY family transcriptional regulator	NA	NA	NA	NA	NA
WP_041310073.1|1573688_1574609_+	M56 family metallopeptidase	NA	NA	NA	NA	NA
WP_011558853.1|1574797_1575385_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011558854.1|1575487_1576603_+	PLP-dependent cysteine synthase family protein	NA	NA	NA	NA	NA
WP_011558855.1|1576599_1577859_+	MFS transporter	NA	NA	NA	NA	NA
WP_011558856.1|1577974_1578760_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011558857.1|1578834_1579605_-	NlpC/P60 family peptidoglycan endopeptidase RipB	NA	NA	NA	NA	NA
WP_011558858.1|1580118_1581339_-	L,D-transpeptidase family protein	NA	NA	NA	NA	NA
WP_011558859.1|1581911_1582748_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_011768132.1|1583017_1583230_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_011558861.1|1583226_1584183_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011558862.1|1584217_1586500_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.7	2.2e-85
WP_011558863.1|1586518_1586794_+	YHS domain-containing protein	NA	NA	NA	NA	NA
WP_011558864.1|1586872_1587202_+	metal-sensitive transcriptional regulator	NA	NA	NA	NA	NA
WP_011558865.1|1587391_1587682_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085975375.1|1587757_1588896_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	34.8	6.3e-33
WP_011768134.1|1589089_1589317_+	DUF2933 domain-containing protein	NA	NA	NA	NA	NA
WP_011558867.1|1589352_1590099_+	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA	NA
WP_011558868.1|1590212_1590815_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.8	3.6e-11
WP_011558869.1|1590811_1592314_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011558870.1|1592310_1592718_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011558871.1|1593046_1595353_+	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.6	9.6e-89
WP_085975370.1|1595831_1597092_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	53.4	5.8e-72
WP_011558873.1|1597618_1597888_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011558874.1|1597933_1598788_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011558258.1|1598971_1600219_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	42.4	5.8e-80
1598928:1600345	attR	GGTCAAGTCCCGGGAAGTGGTGTAGTGCTGCGTGATCCGGTGGGTTAAGCGGTGAGTGCGGGCATGTCGTCGGCTCCTATTTCGGGATTGTCGTTGGTGATGGTGGTCAGGCGGCATCGGGCGAGGATGTCGAGGCCGAGGTAGCGGCGTCCTTCGGCCCATTCGTCGTTCTGTTCGGCCAGGACGGCGCCGACGAGGCGGACGATGGCGTCGCGGTTGGGGAAGATGCCCACGGCGTCGGTGCGGCGGCGGATCTCCTTGTTGAGCCGTTCGGCGGGGTTGTTGGACCAGATCTGGGTCCAGACGTCTTTGGGGAATGCGGTGAAGGCCAGAATGTCTTCGCGTGCAGCACTGAGGTGTTCGGCCACGGCGGGCAGTTTGTCGGTGACGTAGTCGATGAGCCGGTCGAATTGCGCGGCCACCGCGGGTGCGTCAGGTTGGTCATAGACGCTGTGCAGCATCGCTTTGACTGCCGGCCACATGCTCTTGGGGCAGATGCTCATCAGGTTGGCCGCGTAGTGGGTGCGACACCGCTGCCAGGCCGCTCCGGGCAGGTTGGCCGCGATCGCTTCGCGCAGGCCGGCGTGGGCGTCGCTGGTGACCAGTCGTACGCCGGCCAGTCCACGGGCGACCAGGTCGGCGAAGAACTCGTTCCAGGCCGGGCCAGTCTCGCTGGTGACCACGCGCATGCCCAGGACTTCGCGGTGTCCGTCGCCGTTGACGCCGGTGGCCAGCAGCACGACCCCGTTGACCACCCGCCCGCCTTCGCGCACCTTCATCGTCAACGCGTCCGCGGCGACGAAGGTGAACGGGCCAGCAGAATCGAGGGGGCGGTGGCGGAACTGCTCGACGTGCTCGTCGAGGTCGGTGGCCATGCGGCTGACCTGCGATTTACTCAGCGAATCGATGCCCAGGGTCTTGACCAACTTGTCCATCCGCCGCGTGCTCACCCCGGCCAAATAGCAGTCGGCGACCACGGTGATCAGCGCTGATTCGGCCCGCTTGCGGCGTTCGAGCAGCCAGTCGGGAAAGTAGGTTCCCTTGCGCAGCTTGGGAACCGCGACATCGATGGTGCCCACCCGGGTGTCCAGGCCGCGGTGGCGATACCCGTTGCGCTGGGACCGCCGTCCTGGTGTGGGCTGGCCCCATTCGGCGCCCACCACGGCATCAGCATCCGCCGAGAGCAGGGCGTTGATCACGGTCTGCAGCAGCGAGCGCATCAGATCTGGCGAGGCTTCGGAGAGGGCTTCGCCAAGAAGGCCTGCAGGGTCGACAATGTGGGGTGCGGTCATCGTGATGCTCCTCGAGGATTCTGTGGAAGGTTGACTCGAAGGATCACGCGGTGGCCGCTTTACGTCCATCACCGACACGATGACGAACCCAGCAACCGCGCTACACCACTATGCGGGACTCAACTA	NA	NA	NA	NA
>prophage 2
NC_008705	Mycobacterium sp. KMS, complete sequence	5737227	1818999	1864456	5737227	transposase,integrase	Leptospira_phage(60.0%)	46	1820019:1820034	1823961:1823976
WP_011768156.1|1818999_1820181_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	40.3	3.6e-63
1820019:1820034	attL	CGTTATCTGGAGTCCT	NA	NA	NA	NA
WP_041310610.1|1820140_1821250_+|integrase	site-specific integrase	integrase	A0A220NQQ9	Corynebacterium_phage	33.3	1.2e-12
WP_011562840.1|1821294_1823460_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_011562839.1|1823449_1823860_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011559084.1|1824390_1825290_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
1823961:1823976	attR	AGGACTCCAGATAACG	NA	NA	NA	NA
WP_011559085.1|1825289_1826606_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
WP_011559086.1|1826608_1827121_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_011768159.1|1827157_1828387_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_011768160.1|1828406_1829360_+	extradiol ring-cleavage dioxygenase	NA	NA	NA	NA	NA
WP_011559089.1|1829893_1830673_+	class II aldolase/adducin family protein	NA	NA	NA	NA	NA
WP_013470377.1|1830909_1831761_+	3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenase	NA	NA	NA	NA	NA
WP_011768161.1|1831773_1832664_+	glyoxalase	NA	NA	NA	NA	NA
WP_011559093.1|1832736_1834137_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_011559094.1|1834201_1834720_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_011559095.1|1834768_1834987_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085975375.1|1836488_1837626_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	34.8	6.3e-33
WP_011559096.1|1837843_1838953_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_011559097.1|1838978_1839983_-	ketopantoate reductase family protein	NA	NA	NA	NA	NA
WP_011559098.1|1839982_1840960_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_041309542.1|1841234_1841984_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011855201.1|1842056_1842854_+	protocatechuate 3,4-dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_011559101.1|1842853_1843423_+	protocatechuate 3,4-dioxygenase subunit alpha	NA	NA	NA	NA	NA
WP_011559102.1|1843419_1844625_+	fumarate lyase	NA	NA	NA	NA	NA
WP_011559103.1|1844621_1845803_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_011559104.1|1845799_1846498_+	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_011559105.1|1846494_1847217_+	3-oxoacid CoA-transferase subunit B	NA	NA	NA	NA	NA
WP_011559106.1|1847281_1848016_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_011559107.1|1848008_1848602_+	CAP domain-containing protein	NA	NA	NA	NA	NA
WP_011768164.1|1848812_1849301_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_011559109.1|1849311_1849665_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_085975375.1|1849903_1851041_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	34.8	6.3e-33
WP_011559096.1|1851258_1852368_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_011559097.1|1852393_1853398_-	ketopantoate reductase family protein	NA	NA	NA	NA	NA
WP_011559098.1|1853397_1854375_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_041309542.1|1854649_1855399_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011855201.1|1855471_1856269_+	protocatechuate 3,4-dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_011559101.1|1856268_1856838_+	protocatechuate 3,4-dioxygenase subunit alpha	NA	NA	NA	NA	NA
WP_011559102.1|1856834_1858040_+	fumarate lyase	NA	NA	NA	NA	NA
WP_011559103.1|1858036_1859218_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_011559104.1|1859214_1859913_+	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_011559105.1|1859909_1860632_+	3-oxoacid CoA-transferase subunit B	NA	NA	NA	NA	NA
WP_011559106.1|1860696_1861431_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_011559107.1|1861423_1862017_+	CAP domain-containing protein	NA	NA	NA	NA	NA
WP_011768164.1|1862227_1862716_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_011559109.1|1862726_1863080_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_085975375.1|1863318_1864456_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	34.8	6.3e-33
>prophage 3
NC_008705	Mycobacterium sp. KMS, complete sequence	5737227	1971703	1979429	5737227		Bacillus_phage(16.67%)	8	NA	NA
WP_011559210.1|1971703_1972561_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	37.2	2.9e-06
WP_011559211.1|1972568_1973741_-	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	35.7	1.4e-56
WP_011559212.1|1973750_1974818_-	DNA polymerase IV	NA	F1C5A5	Cronobacter_phage	26.5	1.0e-13
WP_011559213.1|1974821_1975424_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011559214.1|1975519_1976086_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	33.1	1.2e-08
WP_011559215.1|1976551_1976803_+	redoxin NrdH	NA	V5UN81	Mycobacterium_phage	64.5	1.6e-21
WP_011559216.1|1976835_1977294_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA	NA
WP_082947857.1|1977260_1979429_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	51.0	1.5e-205
>prophage 4
NC_008705	Mycobacterium sp. KMS, complete sequence	5737227	3086612	3099846	5737227	integrase,portal,terminase,capsid	Streptomyces_phage(22.22%)	18	3083487:3083502	3098977:3098992
3083487:3083502	attL	ACCGTCGGCGCCGACG	NA	NA	NA	NA
WP_011768245.1|3086612_3087071_-	transglycosylase family protein	NA	A0A1J0GVU2	Streptomyces_phage	58.7	1.8e-26
WP_011560302.1|3087500_3087821_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011560303.1|3087820_3088666_-|capsid	phage major capsid protein	capsid	Q7Y410	Yersinia_phage	24.2	5.6e-10
WP_011560304.1|3088912_3089368_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011560305.1|3089364_3089955_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011560306.1|3089951_3091271_-|portal	phage portal protein	portal	A0A1B3B111	Gordonia_phage	30.5	3.2e-36
WP_011560307.1|3091267_3092737_-|terminase	terminase	terminase	Q9T214	Streptomyces_phage	35.4	2.6e-55
WP_011560308.1|3092736_3093111_-	HNH endonuclease	NA	U5PTU3	Clavibacter_phage	53.7	3.0e-16
WP_011560309.1|3093490_3093736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011560310.1|3093732_3094077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041309710.1|3094069_3094252_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011560311.1|3094248_3095349_-	AAA family ATPase	NA	A0A2P1CJ11	Microbacterium_phage	29.3	5.5e-10
WP_011560312.1|3095345_3095621_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011560313.1|3095617_3095986_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011560314.1|3095982_3096252_-	helix-turn-helix domain-containing protein	NA	A0A2D1GF53	Mycobacterium_phage	58.2	4.8e-08
WP_011768246.1|3096284_3096905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011560316.1|3096901_3098041_+|integrase	site-specific integrase	integrase	A0A023ZX87	Mycobacterium_phage	47.2	1.2e-87
WP_011560317.1|3098268_3099846_+	deoxyribodipyrimidine photo-lyase	NA	A0A1V0CPG0	Kaumoebavirus	32.7	1.1e-40
3098977:3098992	attR	ACCGTCGGCGCCGACG	NA	NA	NA	NA
>prophage 5
NC_008705	Mycobacterium sp. KMS, complete sequence	5737227	4410505	4418691	5737227		Gordonia_phage(16.67%)	9	NA	NA
WP_011561485.1|4410505_4411741_+	exodeoxyribonuclease VII large subunit	NA	A0A1B3AYB4	Gordonia_phage	51.9	1.3e-68
WP_011561486.1|4411727_4411940_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_011561487.1|4412003_4413119_+	NAD-dependent epimerase/dehydratase family protein	NA	Q76TT0	Molluscum_contagiosum_virus	33.0	9.2e-29
WP_011561488.1|4413128_4413449_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011561489.1|4413523_4414240_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	44.4	1.4e-14
WP_011561491.1|4414554_4416099_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.1	9.4e-157
WP_011561492.1|4416098_4417007_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_011561493.1|4416999_4417875_+	formylglycine-generating enzyme family protein	NA	A0A075BSL8	Microcystis_phage	28.9	2.3e-14
WP_041310282.1|4417926_4418691_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	42.5	2.0e-11
>prophage 1
NC_008703	Mycobacterium sp. KMS plasmid pMKMS01, complete sequence	302089	54898	100417	302089	integrase,transposase	Mycobacterium_phage(27.27%)	42	40741:40758	94471:94488
40741:40758	attL	GGCGGCGGCCAGCTCGGC	NA	NA	NA	NA
WP_011767755.1|54898_55903_-|transposase	IS1595-like element ISMfl2 family transposase	transposase	NA	NA	NA	NA
WP_083775478.1|55987_56695_+	MMPL family transporter	NA	NA	NA	NA	NA
WP_011767757.1|56828_57722_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_083775473.1|57906_58863_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_110797900.1|58886_59784_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011767759.1|59819_60449_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041321950.1|60461_60791_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011767761.1|60790_61873_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A142KCU7	Gordonia_phage	26.4	3.9e-08
WP_041321953.1|63000_63456_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041321956.1|63471_64428_+	hypothetical protein	NA	A0A1P8D5M4	Corynebacterium_phage	32.4	3.7e-26
WP_011767765.1|64624_66574_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041321958.1|66794_67733_+	DNA ligase	NA	A0A076GD42	Sinorhizobium_phage	35.4	9.8e-32
WP_011767767.1|67733_69290_-	serine/threonine protein kinase	NA	A0A1B1IUU3	uncultured_Mediterranean_phage	32.5	5.1e-17
WP_011767768.1|69336_69747_-	ribonuclease	NA	NA	NA	NA	NA
WP_011767769.1|69737_69965_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041321962.1|70109_71066_+	DUF4226 domain-containing protein	NA	NA	NA	NA	NA
WP_153266297.1|71097_71361_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041322043.1|71491_71824_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011767773.1|71902_72607_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011767774.1|73061_74261_+	helix-turn-helix transcriptional regulator	NA	V5UNB6	Mycobacterium_phage	37.8	1.6e-10
WP_011767775.1|74266_75184_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011767776.1|75289_75598_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049772852.1|76224_77379_-	MFS transporter	NA	NA	NA	NA	NA
WP_049772853.1|77467_77971_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011767779.1|78225_78567_-	MerR family DNA-binding protein	NA	NA	NA	NA	NA
WP_011767780.1|78693_79509_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_013470158.1|79505_80966_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A2H4JEQ4	uncultured_Caudovirales_phage	24.8	3.1e-08
WP_011767782.1|81056_81677_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_083775474.1|81869_81980_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_163886445.1|85640_86687_+	DUF2637 domain-containing protein	NA	V5UP70	Mycobacterium_phage	43.9	3.4e-17
WP_041321969.1|87426_87870_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011767787.1|87873_88710_-	ParB N-terminal domain-containing protein	NA	A0A1C9EHY8	Gordonia_phage	30.3	1.4e-05
WP_011767788.1|88709_89423_-	ParA family protein	NA	D3JZ99	Mycobacterium_phage	32.1	2.0e-05
WP_011767789.1|90175_90928_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011767790.1|91957_92887_+	ParA family protein	NA	F0PIG8	Enterococcus_phage	27.3	9.1e-06
WP_011767791.1|92883_93576_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011767792.1|93610_94315_-	transcription factor WhiB	NA	NA	NA	NA	NA
WP_041321975.1|94299_94560_+	hypothetical protein	NA	NA	NA	NA	NA
94471:94488	attR	GGCGGCGGCCAGCTCGGC	NA	NA	NA	NA
WP_083775475.1|96210_96501_-	transcription factor WhiB	NA	NA	NA	NA	NA
WP_153266299.1|96712_97426_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_011767797.1|98040_99171_+	lytic transglycosylase	NA	G9FHI5	Rhodococcus_phage	34.9	1.2e-12
WP_167535226.1|99721_100417_+|transposase	TnsA-like heteromeric transposase endonuclease subunit	transposase	NA	NA	NA	NA
>prophage 1
NC_008704	Mycobacterium sp. KMS plasmid pMKMS02, complete sequence	216763	25554	65394	216763	transposase	Mycobacterium_phage(37.5%)	36	NA	NA
WP_011558258.1|25554_26802_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	42.4	5.8e-80
WP_011562807.1|27535_27946_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167535230.1|28211_28382_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011562809.1|28742_29420_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011562810.1|29416_30136_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011562811.1|30135_33330_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011562812.1|33326_33719_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011767984.1|34184_34481_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011562816.1|36282_36618_-|transposase	transposase	transposase	Q8W6R2	Burkholderia_virus	47.6	3.2e-17
WP_109750939.1|36598_37798_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	31.7	5.8e-37
WP_011558261.1|39200_40520_-|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	92.5	3.4e-232
WP_083775484.1|40897_41269_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_011562981.1|41273_42023_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041310550.1|42070_42886_+	2-keto-4-pentenoate hydratase	NA	NA	NA	NA	NA
WP_011562979.1|42882_43830_+	acetaldehyde dehydrogenase (acetylating)	NA	G8DDL4	Micromonas_pusilla_virus	32.4	1.2e-32
WP_011562978.1|43826_44876_+	4-hydroxy-2-oxovalerate aldolase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	31.0	2.9e-40
WP_011562976.1|45618_46518_+	alpha/beta fold hydrolase	NA	A0A249XTU1	Mycobacterium_phage	34.2	2.1e-07
WP_011562975.1|46517_47834_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
WP_011562974.1|47836_48349_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_011562973.1|48388_49618_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_011562972.1|49637_50606_+	extradiol ring-cleavage dioxygenase	NA	NA	NA	NA	NA
WP_011767986.1|51205_51955_+	class II aldolase/adducin family protein	NA	NA	NA	NA	NA
WP_049771653.1|52059_52623_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041310557.1|52789_53668_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011562968.1|53762_54206_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_011562967.1|54306_54864_-	3-phenylpropionate/cinnamic acid dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_011562966.1|54860_56276_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_011562965.1|56523_56721_-	ferredoxin	NA	NA	NA	NA	NA
WP_011562964.1|56751_57798_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011562963.1|57784_58243_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_011562962.1|58279_59446_-	transporter	NA	NA	NA	NA	NA
WP_011562961.1|59442_60696_-	CoA transferase	NA	NA	NA	NA	NA
WP_011562960.1|60748_61780_-	2,3-butanediol dehydrogenase	NA	NA	NA	NA	NA
WP_011562959.1|61886_62429_-	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_049771638.1|62425_63760_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_011558261.1|64074_65394_+|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	92.5	3.4e-232
>prophage 2
NC_008704	Mycobacterium sp. KMS plasmid pMKMS02, complete sequence	216763	165116	204779	216763	transposase,protease,integrase	Mycobacterium_phage(33.33%)	30	182291:182310	186237:186256
WP_011562855.1|165116_166499_-|protease	type VII secretion-associated serine protease mycosin	protease	V5UPA7	Mycobacterium_phage	40.1	4.7e-75
WP_011562854.1|166498_167917_-	type VII secretion integral membrane protein EccD	NA	NA	NA	NA	NA
WP_153266311.1|167919_169071_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_011562852.1|169608_170439_-	ESX secretion-associated protein EspG	NA	NA	NA	NA	NA
WP_011562851.1|170431_170671_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011562850.1|171299_172958_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	29.1	1.9e-09
WP_011562849.1|173082_173952_+	ParA family protein	NA	NA	NA	NA	NA
WP_011562848.1|173944_174196_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167535236.1|174427_174598_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011562847.1|174630_174990_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011562846.1|175265_176705_+	recombinase family protein	NA	A0A2D1GQ20	Mycobacterium_phage	37.6	6.9e-61
WP_041310603.1|176924_177881_+	ATP-binding protein	NA	A0A0R6PCP6	Moraxella_phage	31.5	2.2e-10
WP_041310606.1|177877_180490_+	S8 family peptidase	NA	NA	NA	NA	NA
WP_011562843.1|180787_181225_-	hypothetical protein	NA	NA	NA	NA	NA
182291:182310	attL	CGATCGTTATCTGGAGTCCT	NA	NA	NA	NA
WP_041310610.1|182416_183526_+|integrase	site-specific integrase	integrase	A0A220NQQ9	Corynebacterium_phage	33.3	1.2e-12
WP_011562840.1|183570_185736_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_011562839.1|185725_186136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011562837.1|186473_187550_-	hypothetical protein	NA	NA	NA	NA	NA
186237:186256	attR	AGGACTCCAGATAACGATCG	NA	NA	NA	NA
WP_109750939.1|188279_189479_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	31.7	5.8e-37
WP_085975523.1|191310_192473_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	32.2	9.3e-32
WP_011562829.1|192524_193118_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011562828.1|193110_194553_-	cell division protein FtsK	NA	G1FGP1	Mycobacterium_phage	28.1	6.2e-09
WP_011562827.1|194642_194981_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011562825.1|196025_196493_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_041310618.1|196502_197039_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_011562823.1|197586_198156_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011562822.1|198245_198710_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011562821.1|198706_201544_-	RND family transporter	NA	NA	NA	NA	NA
WP_011562820.1|201540_201984_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109750939.1|203579_204779_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	31.7	5.8e-37
