assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000015405.1_ASM1540v1	NC_008705	Mycobacterium sp. KMS, complete sequence	1	4088587-4088690	1	CRISPRCasFinder	no		WYL,cas3,csa3,casR,cas4,DEDDh,DinG	Orphan	GCGCTGAGGGCCTGGGCAAGTCTC	24	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,csa3,casR,cas4,DEDDh,DinG,csf1gr8,csf4gr11,csf2gr7	NA|274aa|up_9|NC_008705.1_4080868_4081690_-,NA|237aa|up_8|NC_008705.1_4081686_4082397_-,NA|221aa|up_2|NC_008705.1_4087067_4087730_-,NA|125aa|up_1|NC_008705.1_4087753_4088128_-,NA|62aa|up_0|NC_008705.1_4088168_4088354_-,NA|105aa|down_1|NC_008705.1_4089280_4089595_-,NA|110aa|down_2|NC_008705.1_4089611_4089941_-,NA|75aa|down_4|NC_008705.1_4091297_4091522_-,NA|216aa|down_5|NC_008705.1_4091521_4092169_-,NA|73aa|down_6|NC_008705.1_4092171_4092390_-,NA|84aa|down_7|NC_008705.1_4092367_4092619_-,NA|93aa|down_8|NC_008705.1_4092703_4092982_-,NA|132aa|down_9|NC_008705.1_4093007_4093403_-	NA|274aa|up_9|NC_008705.1_4080868_4081690_-	NA	NA|237aa|up_8|NC_008705.1_4081686_4082397_-	NA	NA|192aa|up_7|NC_008705.1_4082501_4083077_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|291aa|up_6|NC_008705.1_4083078_4083951_-	COG1703, ArgK, Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]	NA|384aa|up_5|NC_008705.1_4083963_4085115_-	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|255aa|up_4|NC_008705.1_4085193_4085958_+	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs	NA|247aa|up_3|NC_008705.1_4085954_4086695_+	PRK08278, PRK08278, SDR family oxidoreductase	NA|221aa|up_2|NC_008705.1_4087067_4087730_-	NA	NA|125aa|up_1|NC_008705.1_4087753_4088128_-	NA	NA|62aa|up_0|NC_008705.1_4088168_4088354_-	NA	NA|120aa|down_0|NC_008705.1_4088921_4089281_-	pfam01844, HNH, HNH endonuclease	NA|105aa|down_1|NC_008705.1_4089280_4089595_-	NA	NA|110aa|down_2|NC_008705.1_4089611_4089941_-	NA	NA|286aa|down_3|NC_008705.1_4090211_4091069_-	pfam05065, Phage_capsid, Phage capsid family	NA|75aa|down_4|NC_008705.1_4091297_4091522_-	NA	NA|216aa|down_5|NC_008705.1_4091521_4092169_-	NA	NA|73aa|down_6|NC_008705.1_4092171_4092390_-	NA	NA|84aa|down_7|NC_008705.1_4092367_4092619_-	NA	NA|93aa|down_8|NC_008705.1_4092703_4092982_-	NA	NA|132aa|down_9|NC_008705.1_4093007_4093403_-	NA
GCF_000015405.1_ASM1540v1	NC_008705	Mycobacterium sp. KMS, complete sequence	2	4533157-4533261	2	CRISPRCasFinder	no	cas3	WYL,cas3,csa3,casR,cas4,DEDDh,DinG	Unclear	GAGACTTGGCCCAGGCCCTCAGCGC	25	0	0	NA	NA	NA	1	1	Unclear	WYL,cas3,csa3,casR,cas4,DEDDh,DinG,csf1gr8,csf4gr11,csf2gr7	NA|132aa|up_9|NC_008705.1_4528444_4528840_+,NA|93aa|up_8|NC_008705.1_4528865_4529144_+,NA|84aa|up_7|NC_008705.1_4529228_4529480_+,NA|73aa|up_6|NC_008705.1_4529457_4529676_+,NA|216aa|up_5|NC_008705.1_4529678_4530326_+,NA|75aa|up_4|NC_008705.1_4530325_4530550_+,NA|110aa|up_2|NC_008705.1_4531906_4532236_+,NA|105aa|up_1|NC_008705.1_4532252_4532567_+,NA|62aa|down_0|NC_008705.1_4533493_4533679_+,NA|125aa|down_1|NC_008705.1_4533719_4534094_+,NA|221aa|down_2|NC_008705.1_4534117_4534780_+,NA|123aa|down_6|NC_008705.1_4537312_4537681_+	NA|132aa|up_9|NC_008705.1_4528444_4528840_+	NA	NA|93aa|up_8|NC_008705.1_4528865_4529144_+	NA	NA|84aa|up_7|NC_008705.1_4529228_4529480_+	NA	NA|73aa|up_6|NC_008705.1_4529457_4529676_+	NA	NA|216aa|up_5|NC_008705.1_4529678_4530326_+	NA	NA|75aa|up_4|NC_008705.1_4530325_4530550_+	NA	NA|286aa|up_3|NC_008705.1_4530778_4531636_+	pfam05065, Phage_capsid, Phage capsid family	NA|110aa|up_2|NC_008705.1_4531906_4532236_+	NA	NA|105aa|up_1|NC_008705.1_4532252_4532567_+	NA	NA|120aa|up_0|NC_008705.1_4532566_4532926_+	pfam01844, HNH, HNH endonuclease	NA|62aa|down_0|NC_008705.1_4533493_4533679_+	NA	NA|125aa|down_1|NC_008705.1_4533719_4534094_+	NA	NA|221aa|down_2|NC_008705.1_4534117_4534780_+	NA	NA|156aa|down_3|NC_008705.1_4535314_4535782_+	pfam14325, DUF4383, Domain of unknown function (DUF4383)	NA|235aa|down_4|NC_008705.1_4535785_4536490_+	COG0428, COG0428, Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]	NA|262aa|down_5|NC_008705.1_4536530_4537316_+	pfam01790, LGT, Prolipoprotein diacylglyceryl transferase	NA|123aa|down_6|NC_008705.1_4537312_4537681_+	NA	NA|515aa|down_7|NC_008705.1_4537689_4539234_+	COG1964, COG1964, Predicted Fe-S oxidoreductases [General function prediction only]	NA|313aa|down_8|NC_008705.1_4539230_4540169_-	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]	NA|167aa|down_9|NC_008705.1_4540161_4540662_-	COG1507, COG1507, Uncharacterized conserved protein [Function unknown]
GCF_000015405.1_ASM1540v1	NC_008705	Mycobacterium sp. KMS, complete sequence	3	4642613-4642699	3	CRISPRCasFinder	no	csa3	WYL,cas3,csa3,casR,cas4,DEDDh,DinG	Type I-A	GCATCATCCGCCGTCACCCGACCGGCG	27	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,csa3,casR,cas4,DEDDh,DinG,csf1gr8,csf4gr11,csf2gr7	NA|473aa|up_7|NC_008705.1_4632791_4634210_-,NA	NA|528aa|up_9|NC_008705.1_4630562_4632146_-	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|210aa|up_8|NC_008705.1_4632142_4632772_-	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|473aa|up_7|NC_008705.1_4632791_4634210_-	NA	NA|296aa|up_6|NC_008705.1_4634267_4635155_-	pfam17270, DUF5336, Family of unknown function (DUF5336)	NA|377aa|up_5|NC_008705.1_4635300_4636431_-	TIGR04021, LLM_DMSO2_sfnG, dimethyl sulfone monooxygenase SfnG	NA|283aa|up_4|NC_008705.1_4636531_4637380_+	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family	NA|510aa|up_3|NC_008705.1_4637451_4638981_-	PRK08257, PRK08257, acetyl-CoA acetyltransferase; Validated	NA|301aa|up_2|NC_008705.1_4639126_4640029_-	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|388aa|up_1|NC_008705.1_4640039_4641203_-	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|361aa|up_0|NC_008705.1_4641465_4642548_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|786aa|down_0|NC_008705.1_4643189_4645547_-	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|99aa|down_1|NC_008705.1_4645745_4646042_+	PRK07857, PRK07857, chorismate mutase	NA|682aa|down_2|NC_008705.1_4646094_4648140_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|483aa|down_3|NC_008705.1_4648299_4649748_-	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like	NA|555aa|down_4|NC_008705.1_4649799_4651464_+	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|250aa|down_5|NC_008705.1_4651513_4652263_-	PRK08251, PRK08251, SDR family oxidoreductase	NA|288aa|down_6|NC_008705.1_4652336_4653200_-	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]	NA|130aa|down_7|NC_008705.1_4653216_4653606_-	COG1950, COG1950, Predicted membrane protein [Function unknown]	NA|255aa|down_8|NC_008705.1_4653624_4654389_-	PRK08284, PRK08284, precorrin 6A synthase; Provisional	NA|351aa|down_9|NC_008705.1_4654416_4655469_-	pfam03631, Virul_fac_BrkB, Virulence factor BrkB
GCF_000015405.1_ASM1540v1	NC_008705	Mycobacterium sp. KMS, complete sequence	4	5574610-5574710	4	CRISPRCasFinder	no	csa3	WYL,cas3,csa3,casR,cas4,DEDDh,DinG	Type I-A	GGCCACGACGGCGGGGCCGACGGCACCGC	29	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,csa3,casR,cas4,DEDDh,DinG,csf1gr8,csf4gr11,csf2gr7	NA|55aa|up_7|NC_008705.1_5565317_5565482_+,NA|117aa|down_9|NC_008705.1_5582789_5583140_+	NA|250aa|up_9|NC_008705.1_5563648_5564398_-	pfam13185, GAF_2, GAF domain	NA|209aa|up_8|NC_008705.1_5564413_5565040_-	smart01012, ANTAR, ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins	NA|55aa|up_7|NC_008705.1_5565317_5565482_+	NA	NA|709aa|up_6|NC_008705.1_5565495_5567622_-	pfam02538, Hydantoinase_B, Hydantoinase B/oxoprolinase	NA|196aa|up_5|NC_008705.1_5569915_5570503_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|426aa|up_4|NC_008705.1_5570468_5571746_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|164aa|up_3|NC_008705.1_5571835_5572327_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|323aa|up_2|NC_008705.1_5572330_5573299_-	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs	NA|152aa|up_1|NC_008705.1_5573361_5573817_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|173aa|up_0|NC_008705.1_5573910_5574429_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|405aa|down_0|NC_008705.1_5574723_5575938_+	pfam08007, Cupin_4, Cupin superfamily protein	NA|296aa|down_1|NC_008705.1_5575934_5576822_+	COG4759, COG4759, Uncharacterized protein conserved in bacteria containing thioredoxin-like domain [Posttranslational modification, protein turnover, chaperones]	NA|161aa|down_2|NC_008705.1_5576861_5577344_-	cd14797, DUF302, Uncharacterized domain family DUF302	NA|177aa|down_3|NC_008705.1_5577356_5577887_-	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|321aa|down_4|NC_008705.1_5577889_5578852_-	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs	NA|197aa|down_5|NC_008705.1_5579087_5579678_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|459aa|down_6|NC_008705.1_5579680_5581057_-	cd17367, MFS_KgtP, Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters	NA|280aa|down_7|NC_008705.1_5581219_5582059_+	pfam02211, NHase_beta, Nitrile hydratase beta subunit	NA|236aa|down_8|NC_008705.1_5582077_5582785_+	TIGR03887, Thiocyanate_hydrolase_subunit_gamma, thiocyanate hydrolase, gamma subunit	NA|117aa|down_9|NC_008705.1_5582789_5583140_+	NA
