assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000016645.1_ASM1664v1	NC_009441	Flavobacterium johnsoniae UW101, complete sequence	1	644499-644594	1	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,RT,PD-DExK	Orphan	AATCAATTTACAGGTACAATTCC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,RT,PD-DExK	NA|119aa|up_8|NC_009441.1_632464_632821_+,NA|59aa|up_4|NC_009441.1_635417_635594_-,NA|201aa|up_1|NC_009441.1_637567_638170_+,NA|1858aa|up_0|NC_009441.1_638166_643740_+,NA|237aa|down_2|NC_009441.1_658014_658725_+,NA|405aa|down_8|NC_009441.1_674265_675480_+,NA|115aa|down_9|NC_009441.1_675454_675799_+	NA|305aa|up_9|NC_009441.1_631470_632385_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|119aa|up_8|NC_009441.1_632464_632821_+	NA	NA|404aa|up_7|NC_009441.1_632904_634116_+	TIGR03508, decahem_SO, decaheme c-type cytochrome, DmsE family	NA|248aa|up_6|NC_009441.1_634116_634860_-	cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain	NA|151aa|up_5|NC_009441.1_634932_635385_-	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase	NA|59aa|up_4|NC_009441.1_635417_635594_-	NA	NA|255aa|up_3|NC_009441.1_635684_636449_-	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|169aa|up_2|NC_009441.1_637077_637584_+	smart00935, OmpH, Outer membrane protein (OmpH-like)	NA|201aa|up_1|NC_009441.1_637567_638170_+	NA	NA|1858aa|up_0|NC_009441.1_638166_643740_+	NA	NA|928aa|down_0|NC_009441.1_651286_654070_+	cd00146, PKD, polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here	NA|1291aa|down_1|NC_009441.1_654137_658010_+	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|237aa|down_2|NC_009441.1_658014_658725_+	NA	NA|342aa|down_3|NC_009441.1_668709_669735_+	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|191aa|down_4|NC_009441.1_669700_670273_+	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III	NA|349aa|down_5|NC_009441.1_670446_671493_-	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain	NA|332aa|down_6|NC_009441.1_672197_673193_-	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|263aa|down_7|NC_009441.1_673472_674261_+	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown]	NA|405aa|down_8|NC_009441.1_674265_675480_+	NA	NA|115aa|down_9|NC_009441.1_675454_675799_+	NA
GCF_000016645.1_ASM1664v1	NC_009441	Flavobacterium johnsoniae UW101, complete sequence	2	644859-645169	2	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,RT,PD-DExK	Orphan	AATCAATTTACAGGTACAATTCC	23	0	0	NA	NA	NA	4	4	Orphan	WYL,cas3,DEDDh,csa3,RT,PD-DExK	NA|119aa|up_8|NC_009441.1_632464_632821_+,NA|59aa|up_4|NC_009441.1_635417_635594_-,NA|201aa|up_1|NC_009441.1_637567_638170_+,NA|1858aa|up_0|NC_009441.1_638166_643740_+,NA|237aa|down_2|NC_009441.1_658014_658725_+,NA|405aa|down_8|NC_009441.1_674265_675480_+,NA|115aa|down_9|NC_009441.1_675454_675799_+	NA|305aa|up_9|NC_009441.1_631470_632385_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|119aa|up_8|NC_009441.1_632464_632821_+	NA	NA|404aa|up_7|NC_009441.1_632904_634116_+	TIGR03508, decahem_SO, decaheme c-type cytochrome, DmsE family	NA|248aa|up_6|NC_009441.1_634116_634860_-	cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain	NA|151aa|up_5|NC_009441.1_634932_635385_-	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase	NA|59aa|up_4|NC_009441.1_635417_635594_-	NA	NA|255aa|up_3|NC_009441.1_635684_636449_-	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|169aa|up_2|NC_009441.1_637077_637584_+	smart00935, OmpH, Outer membrane protein (OmpH-like)	NA|201aa|up_1|NC_009441.1_637567_638170_+	NA	NA|1858aa|up_0|NC_009441.1_638166_643740_+	NA	NA|928aa|down_0|NC_009441.1_651286_654070_+	cd00146, PKD, polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here	NA|1291aa|down_1|NC_009441.1_654137_658010_+	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|237aa|down_2|NC_009441.1_658014_658725_+	NA	NA|342aa|down_3|NC_009441.1_668709_669735_+	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|191aa|down_4|NC_009441.1_669700_670273_+	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III	NA|349aa|down_5|NC_009441.1_670446_671493_-	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain	NA|332aa|down_6|NC_009441.1_672197_673193_-	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|263aa|down_7|NC_009441.1_673472_674261_+	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown]	NA|405aa|down_8|NC_009441.1_674265_675480_+	NA	NA|115aa|down_9|NC_009441.1_675454_675799_+	NA
GCF_000016645.1_ASM1664v1	NC_009441	Flavobacterium johnsoniae UW101, complete sequence	3	1118828-1118972	1	PILER-CR	no		WYL,cas3,DEDDh,csa3,RT,PD-DExK	Orphan	GCTTCAGCATCAGCTTTAGCTTTTGCTGCAGCTGCAAGT	39	0	0	NA	NA	NA	2	2	Orphan	WYL,cas3,DEDDh,csa3,RT,PD-DExK	NA,NA|484aa|down_0|NC_009441.1_1120007_1121459_-,NA|138aa|down_1|NC_009441.1_1121455_1121869_-,NA|431aa|down_2|NC_009441.1_1121967_1123260_-,NA|151aa|down_3|NC_009441.1_1123447_1123900_-,NA|128aa|down_5|NC_009441.1_1125492_1125876_+	NA|133aa|up_9|NC_009441.1_1085517_1085916_+	PRK01903, rnpA, ribonuclease P protein component	NA|283aa|up_8|NC_009441.1_1085993_1086842_+	pfam14257, DUF4349, Domain of unknown function (DUF4349)	NA|546aa|up_7|NC_009441.1_1086838_1088476_+	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|268aa|up_6|NC_009441.1_1088479_1089283_+	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|214aa|up_5|NC_009441.1_1089518_1090160_-	pfam07617, DUF1579, Protein of unknown function (DUF1579)	NA|323aa|up_4|NC_009441.1_1090240_1091209_-	pfam16125, DUF4837, Domain of unknown function (DUF4837)	NA|611aa|up_3|NC_009441.1_1091257_1093090_-	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional	NA|396aa|up_2|NC_009441.1_1093200_1094388_-	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|333aa|up_1|NC_009441.1_1094604_1095603_-	TIGR03519, bacteroidetes-specific_membrane_protein, type IX secretion system membrane protein, PorP/SprF family	NA|6498aa|up_0|NC_009441.1_1095622_1115116_-	TIGR04131, conserved_hypothetical_protein, gliding motility-associated C-terminal domain	NA|484aa|down_0|NC_009441.1_1120007_1121459_-	NA	NA|138aa|down_1|NC_009441.1_1121455_1121869_-	NA	NA|431aa|down_2|NC_009441.1_1121967_1123260_-	NA	NA|151aa|down_3|NC_009441.1_1123447_1123900_-	NA	NA|383aa|down_4|NC_009441.1_1124336_1125485_+	TIGR00678, DNA_polymerase_III_subunit_delta', DNA polymerase III, delta' subunit	NA|128aa|down_5|NC_009441.1_1125492_1125876_+	NA	NA|170aa|down_6|NC_009441.1_1125912_1126422_+	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism]	NA|336aa|down_7|NC_009441.1_1126569_1127577_+	PRK09354, recA, recombinase A; Provisional	NA|252aa|down_8|NC_009441.1_1128125_1128881_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|325aa|down_9|NC_009441.1_1129033_1130008_+	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed
GCF_000016645.1_ASM1664v1	NC_009441	Flavobacterium johnsoniae UW101, complete sequence	4	1341181-1341330	3	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,RT,PD-DExK	Orphan	TTAGATAAATCTAAAGTTGTTAA	23	0	0	NA	NA	NA	2	2	Orphan	WYL,cas3,DEDDh,csa3,RT,PD-DExK	NA|309aa|up_1|NC_009441.1_1338232_1339159_+,NA|185aa|down_3|NC_009441.1_1353616_1354171_+,NA|282aa|down_4|NC_009441.1_1354412_1355258_+,NA|309aa|down_6|NC_009441.1_1359322_1360249_+,NA|89aa|down_7|NC_009441.1_1360647_1360914_+,NA|304aa|down_8|NC_009441.1_1360898_1361810_+	NA|405aa|up_9|NC_009441.1_1330062_1331277_-	cd06453, SufS_like, Cysteine desulfurase (SufS)-like	NA|450aa|up_8|NC_009441.1_1331496_1332846_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|439aa|up_7|NC_009441.1_1332892_1334209_-	pfam01458, UPF0051, Uncharacterized protein family (UPF0051)	NA|123aa|up_6|NC_009441.1_1334326_1334695_-	TIGR02436, S23_ribosomal_protein, four helix bundle protein	NA|249aa|up_5|NC_009441.1_1334745_1335492_-	TIGR01978, Probable_ATP-dependent_transporter_SufC, FeS assembly ATPase SufC	NA|163aa|up_4|NC_009441.1_1335503_1335992_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|483aa|up_3|NC_009441.1_1335999_1337448_-	PRK11814, PRK11814, cysteine desulfurase activator complex subunit SufB; Provisional	NA|110aa|up_2|NC_009441.1_1337527_1337857_-	COG0316, sufA, Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones]	NA|309aa|up_1|NC_009441.1_1338232_1339159_+	NA	NA|286aa|up_0|NC_009441.1_1339243_1340101_+	cd16281, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|1680aa|down_0|NC_009441.1_1344532_1349572_-	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton]	NA|545aa|down_1|NC_009441.1_1349848_1351483_+	cd07483, Peptidases_S8_Subtilisin_Novo-like, Peptidase S8 family domain in Subtilisin_Novo-like proteins	NA|627aa|down_2|NC_009441.1_1351547_1353428_+	cd09604, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|185aa|down_3|NC_009441.1_1353616_1354171_+	NA	NA|282aa|down_4|NC_009441.1_1354412_1355258_+	NA	NA|1348aa|down_5|NC_009441.1_1355263_1359307_+	pfam14107, DUF4280, Domain of unknown function (DUF4280)	NA|309aa|down_6|NC_009441.1_1359322_1360249_+	NA	NA|89aa|down_7|NC_009441.1_1360647_1360914_+	NA	NA|304aa|down_8|NC_009441.1_1360898_1361810_+	NA	NA|400aa|down_9|NC_009441.1_1362046_1363246_-	COG2311, COG2311, Predicted membrane protein [Function unknown]
GCF_000016645.1_ASM1664v1	NC_009441	Flavobacterium johnsoniae UW101, complete sequence	5	1341622-1341770	4	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,RT,PD-DExK	Orphan	TTAGATAAATCTAAAGTTGTTAA	23	0	0	NA	NA	NA	2	2	Orphan	WYL,cas3,DEDDh,csa3,RT,PD-DExK	NA|309aa|up_1|NC_009441.1_1338232_1339159_+,NA|185aa|down_3|NC_009441.1_1353616_1354171_+,NA|282aa|down_4|NC_009441.1_1354412_1355258_+,NA|309aa|down_6|NC_009441.1_1359322_1360249_+,NA|89aa|down_7|NC_009441.1_1360647_1360914_+,NA|304aa|down_8|NC_009441.1_1360898_1361810_+	NA|405aa|up_9|NC_009441.1_1330062_1331277_-	cd06453, SufS_like, Cysteine desulfurase (SufS)-like	NA|450aa|up_8|NC_009441.1_1331496_1332846_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|439aa|up_7|NC_009441.1_1332892_1334209_-	pfam01458, UPF0051, Uncharacterized protein family (UPF0051)	NA|123aa|up_6|NC_009441.1_1334326_1334695_-	TIGR02436, S23_ribosomal_protein, four helix bundle protein	NA|249aa|up_5|NC_009441.1_1334745_1335492_-	TIGR01978, Probable_ATP-dependent_transporter_SufC, FeS assembly ATPase SufC	NA|163aa|up_4|NC_009441.1_1335503_1335992_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|483aa|up_3|NC_009441.1_1335999_1337448_-	PRK11814, PRK11814, cysteine desulfurase activator complex subunit SufB; Provisional	NA|110aa|up_2|NC_009441.1_1337527_1337857_-	COG0316, sufA, Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones]	NA|309aa|up_1|NC_009441.1_1338232_1339159_+	NA	NA|286aa|up_0|NC_009441.1_1339243_1340101_+	cd16281, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|1680aa|down_0|NC_009441.1_1344532_1349572_-	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton]	NA|545aa|down_1|NC_009441.1_1349848_1351483_+	cd07483, Peptidases_S8_Subtilisin_Novo-like, Peptidase S8 family domain in Subtilisin_Novo-like proteins	NA|627aa|down_2|NC_009441.1_1351547_1353428_+	cd09604, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|185aa|down_3|NC_009441.1_1353616_1354171_+	NA	NA|282aa|down_4|NC_009441.1_1354412_1355258_+	NA	NA|1348aa|down_5|NC_009441.1_1355263_1359307_+	pfam14107, DUF4280, Domain of unknown function (DUF4280)	NA|309aa|down_6|NC_009441.1_1359322_1360249_+	NA	NA|89aa|down_7|NC_009441.1_1360647_1360914_+	NA	NA|304aa|down_8|NC_009441.1_1360898_1361810_+	NA	NA|400aa|down_9|NC_009441.1_1362046_1363246_-	COG2311, COG2311, Predicted membrane protein [Function unknown]
GCF_000016645.1_ASM1664v1	NC_009441	Flavobacterium johnsoniae UW101, complete sequence	6	3182380-3182461	5	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,RT,PD-DExK	Orphan	TTAAAACCATATAAATCTATATG	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,RT,PD-DExK	NA|75aa|up_7|NC_009441.1_3166460_3166685_-,NA|52aa|up_6|NC_009441.1_3166977_3167133_-,NA|124aa|up_2|NC_009441.1_3179850_3180222_+,NA|215aa|up_1|NC_009441.1_3180724_3181369_+,NA|188aa|down_0|NC_009441.1_3182733_3183297_+,NA|560aa|down_1|NC_009441.1_3183301_3184981_+,NA|124aa|down_4|NC_009441.1_3186929_3187301_-,NA|61aa|down_6|NC_009441.1_3188050_3188233_+	NA|320aa|up_9|NC_009441.1_3164274_3165234_+	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|367aa|up_8|NC_009441.1_3165263_3166364_+	cd08152, y4iL_like, Catalase-like heme-binding proteins similar to the uncharacterized y4iL	NA|75aa|up_7|NC_009441.1_3166460_3166685_-	NA	NA|52aa|up_6|NC_009441.1_3166977_3167133_-	NA	NA|190aa|up_5|NC_009441.1_3167403_3167973_-	COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only]	NA|554aa|up_4|NC_009441.1_3169450_3171112_+	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain	NA|1153aa|up_3|NC_009441.1_3171115_3174574_+	pfam05593, RHS_repeat, RHS Repeat	NA|124aa|up_2|NC_009441.1_3179850_3180222_+	NA	NA|215aa|up_1|NC_009441.1_3180724_3181369_+	NA	NA|175aa|up_0|NC_009441.1_3181783_3182308_+	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|188aa|down_0|NC_009441.1_3182733_3183297_+	NA	NA|560aa|down_1|NC_009441.1_3183301_3184981_+	NA	NA|306aa|down_2|NC_009441.1_3185091_3186009_+	COG4974, XerD, Site-specific recombinase XerD [DNA replication, recombination, and repair]	NA|289aa|down_3|NC_009441.1_3186020_3186887_+	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC	NA|124aa|down_4|NC_009441.1_3186929_3187301_-	NA	NA|88aa|down_5|NC_009441.1_3187413_3187677_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|61aa|down_6|NC_009441.1_3188050_3188233_+	NA	NA|231aa|down_7|NC_009441.1_3188353_3189046_+	pfam14220, DUF4329, Domain of unknown function (DUF4329)	NA|116aa|down_8|NC_009441.1_3189063_3189411_+	pfam15631, Imm-NTF2-2, NTF2 fold immunity protein	NA|220aa|down_9|NC_009441.1_3189623_3190283_+	pfam03400, DDE_Tnp_IS1, IS1 transposase
GCF_000016645.1_ASM1664v1	NC_009441	Flavobacterium johnsoniae UW101, complete sequence	7	5194431-5194658	6	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,RT,PD-DExK	Orphan	ACTTTTACTTAACATCGTTAGATAATTTAAT	31	0	0	NA	NA	NA	3	3	Orphan	WYL,cas3,DEDDh,csa3,RT,PD-DExK	NA|78aa|up_9|NC_009441.1_5182063_5182297_-,NA|149aa|up_2|NC_009441.1_5191756_5192203_+,NA|154aa|down_3|NC_009441.1_5201096_5201558_+,NA|70aa|down_7|NC_009441.1_5203914_5204124_+	NA|78aa|up_9|NC_009441.1_5182063_5182297_-	NA	NA|183aa|up_8|NC_009441.1_5182818_5183367_-	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus	NA|224aa|up_7|NC_009441.1_5183958_5184630_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|452aa|up_6|NC_009441.1_5184632_5185988_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|413aa|up_5|NC_009441.1_5186132_5187371_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|362aa|up_4|NC_009441.1_5187399_5188485_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1035aa|up_3|NC_009441.1_5188519_5191624_+	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism]	NA|149aa|up_2|NC_009441.1_5191756_5192203_+	NA	NA|145aa|up_1|NC_009441.1_5192183_5192618_-	pfam07883, Cupin_2, Cupin domain	NA|198aa|up_0|NC_009441.1_5193826_5194420_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|406aa|down_0|NC_009441.1_5194668_5195886_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1055aa|down_1|NC_009441.1_5195898_5199063_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|473aa|down_2|NC_009441.1_5199398_5200817_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|154aa|down_3|NC_009441.1_5201096_5201558_+	NA	NA|202aa|down_4|NC_009441.1_5201904_5202510_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|244aa|down_5|NC_009441.1_5202583_5203315_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|127aa|down_6|NC_009441.1_5203522_5203903_+	pfam13564, DoxX_2, DoxX-like family	NA|70aa|down_7|NC_009441.1_5203914_5204124_+	NA	NA|125aa|down_8|NC_009441.1_5204201_5204576_+	cd07246, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|170aa|down_9|NC_009441.1_5204595_5205105_+	pfam12867, DinB_2, DinB superfamily
GCF_000016645.1_ASM1664v1	NC_009441	Flavobacterium johnsoniae UW101, complete sequence	8	5739460-5739576	7	CRISPRCasFinder	no	WYL	WYL,cas3,DEDDh,csa3,RT,PD-DExK	Unclear	TTTTATTTCTGAACAAAGATTTCAAAAC	28	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,RT,PD-DExK	NA|49aa|up_9|NC_009441.1_5728287_5728434_-,NA|113aa|up_5|NC_009441.1_5733072_5733411_-,NA|74aa|up_3|NC_009441.1_5733828_5734050_-,NA|187aa|up_1|NC_009441.1_5735769_5736330_-,NA	NA|49aa|up_9|NC_009441.1_5728287_5728434_-	NA	NA|133aa|up_8|NC_009441.1_5728590_5728989_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|973aa|up_7|NC_009441.1_5729058_5731977_-	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	NA|266aa|up_6|NC_009441.1_5732182_5732980_-	cd01310, TatD_DNAse, TatD like proteins;  E	NA|113aa|up_5|NC_009441.1_5733072_5733411_-	NA	NA|107aa|up_4|NC_009441.1_5733415_5733736_-	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell	NA|74aa|up_3|NC_009441.1_5733828_5734050_-	NA	NA|474aa|up_2|NC_009441.1_5734274_5735696_-	pfam01139, RtcB, tRNA-splicing ligase RtcB	NA|187aa|up_1|NC_009441.1_5735769_5736330_-	NA	NA|747aa|up_0|NC_009441.1_5736733_5738974_-	pfam14447, Prok-RING_4, Prokaryotic RING finger family 4	NA|216aa|down_0|NC_009441.1_5740309_5740957_+	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown]	NA|334aa|down_1|NC_009441.1_5741189_5742191_-	TIGR03519, bacteroidetes-specific_membrane_protein, type IX secretion system membrane protein, PorP/SprF family	NA|1464aa|down_2|NC_009441.1_5742207_5746599_-	pfam13585, CHU_C, C-terminal domain of CHU protein family	WYL|346aa|down_3|NC_009441.1_5746911_5747949_+	pfam13280, WYL, WYL domain	NA|153aa|down_4|NC_009441.1_5748170_5748629_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|797aa|down_5|NC_009441.1_5748663_5751054_+	COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]	NA|118aa|down_6|NC_009441.1_5751103_5751457_+	cd16377, 23S_rRNA_IVP_like, 23S rRNA-intervening sequence protein and similar proteins	NA|394aa|down_7|NC_009441.1_5751515_5752697_+	PRK09052, PRK09052, acetyl-CoA C-acyltransferase	NA|602aa|down_8|NC_009441.1_5752843_5754649_+	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase	NA|365aa|down_9|NC_009441.1_5754876_5755971_+	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites
