The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_009523	Roseiflexus sp. RS-1, complete genome	5801598	233410	242980	5801598	protease	Bacillus_phage(33.33%)	10	NA	NA
WP_011954982.1|233410_234619_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A0S1WEW6	Vibrio_phage	33.0	6.5e-36
WP_011954983.1|234811_235549_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.5	2.2e-39
WP_011954984.1|235560_236037_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	53.8	6.7e-37
WP_011954985.1|236130_236949_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA	NA
WP_049767448.1|237390_238572_+	RNA polymerase sigma factor RpoD	NA	M4SMP8	Cyanophage	35.4	4.8e-36
WP_011954987.1|238833_239115_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_011954988.1|239266_239779_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011954989.1|239784_240537_+	chromosome segregation and condensation protein ScpA	NA	NA	NA	NA	NA
WP_011954990.1|240564_241296_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	37.1	9.0e-33
WP_011954991.1|241309_242980_-	PAS domain S-box protein	NA	Q6XLV6	Feldmannia_irregularis_virus	24.9	3.1e-12
>prophage 3
NC_009523	Roseiflexus sp. RS-1, complete genome	5801598	1996654	2045788	5801598	plate,tail,transposase	Catovirus(12.5%)	41	NA	NA
WP_011956368.1|1996654_1997617_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_011956369.1|1998834_2001003_-	cation acetate symporter	NA	NA	NA	NA	NA
WP_011956370.1|2001023_2001305_-	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_011956371.1|2001707_2002964_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_011956372.1|2002963_2004007_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011956373.1|2004009_2005113_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	23.6	3.6e-17
WP_011956374.1|2005105_2005870_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011956375.1|2005848_2006571_-	septum formation protein Maf	NA	NA	NA	NA	NA
WP_011956376.1|2006567_2007416_-	polyphosphate kinase 2 family protein	NA	NA	NA	NA	NA
WP_011956377.1|2007439_2008465_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_011956378.1|2008486_2009707_-	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_011956379.1|2009823_2011371_-	FHA domain-containing protein	NA	A0A218MLZ2	uncultured_virus	33.2	2.3e-22
WP_011956380.1|2011513_2012101_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_011956381.1|2012121_2014425_-	choice-of-anchor D domain-containing protein	NA	NA	NA	NA	NA
WP_011956382.1|2014893_2016012_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	1.1e-26
WP_011956383.1|2016033_2016942_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011956384.1|2017051_2018014_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_011956385.1|2018270_2019128_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011956386.1|2019188_2020379_+	spermidine/putrescine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_083763276.1|2020820_2021750_+	J domain-containing protein	NA	A0A1V0SF83	Hokovirus	24.6	1.4e-22
WP_011956388.1|2021770_2022064_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011956389.1|2022140_2022560_+	transporter RbsD/FucU	NA	NA	NA	NA	NA
WP_011956390.1|2022572_2024141_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011956391.1|2024425_2025004_+	DUF4255 domain-containing protein	NA	NA	NA	NA	NA
WP_011956392.1|2025026_2026988_+	ATP-binding protein	NA	A0A2D2W2C3	Stenotrophomonas_phage	33.1	3.8e-09
WP_011956393.1|2027358_2029011_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011956394.1|2029047_2029872_+	DUF4157 domain-containing protein	NA	NA	NA	NA	NA
WP_011956395.1|2030057_2032982_+	DUF4157 domain-containing protein	NA	NA	NA	NA	NA
WP_011956396.1|2033007_2033424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011956397.1|2033430_2034393_+	DUF4255 domain-containing protein	NA	NA	NA	NA	NA
WP_011956398.1|2034405_2035971_+|tail	phage tail sheath family protein	tail	J9PVC2	Bacillus_phage	33.1	9.5e-64
WP_011956399.1|2036036_2036477_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_011956400.1|2036660_2037029_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041333354.1|2037033_2037228_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011956401.1|2037232_2037661_+|tail	phage tail protein	tail	T2KTT5	uncultured_phage	34.7	1.1e-11
WP_011956402.1|2037665_2040590_+	DUF4157 domain-containing protein	NA	NA	NA	NA	NA
WP_011956403.1|2040602_2041280_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_011956404.1|2041272_2043042_+	VgrG-related protein	NA	NA	NA	NA	NA
WP_011956405.1|2043055_2043346_+	type VI secretion protein	NA	NA	NA	NA	NA
WP_011956406.1|2043352_2043745_+	GPW/gp25 family protein	NA	A0A126HGC9	Vibrio_phage	36.0	3.5e-07
WP_011956407.1|2043757_2045788_+|plate	putative baseplate assembly protein	plate	NA	NA	NA	NA
>prophage 4
NC_009523	Roseiflexus sp. RS-1, complete genome	5801598	4584386	4650453	5801598	tRNA,protease,transposase	Agrobacterium_phage(12.5%)	51	NA	NA
WP_011958359.1|4584386_4585046_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	47.0	1.6e-44
WP_011958360.1|4585064_4586375_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.6	1.1e-124
WP_011958361.1|4586393_4587290_+	S-methyl-5'-thioadenosine phosphorylase	NA	NA	NA	NA	NA
WP_011958362.1|4589321_4590395_-	serine hydrolase	NA	A0A2H4JAN9	uncultured_Caudovirales_phage	28.1	5.4e-10
WP_157041157.1|4590423_4591125_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011958364.1|4591090_4591783_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011958365.1|4592215_4592725_-	MGMT family protein	NA	NA	NA	NA	NA
WP_157041158.1|4593364_4593517_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011958367.1|4594742_4599410_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_011958368.1|4599417_4600932_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011958369.1|4601142_4601589_-	universal stress protein UspA	NA	NA	NA	NA	NA
WP_011958370.1|4601606_4604396_-	cation-transporting P-type ATPase	NA	M1HX51	Paramecium_bursaria_Chlorella_virus	24.6	6.7e-36
WP_011958371.1|4604415_4604940_-	NAD(P)H-dependent oxidoreductase subunit E	NA	NA	NA	NA	NA
WP_011958372.1|4604958_4606212_-	NADH-quinone oxidoreductase subunit D	NA	NA	NA	NA	NA
WP_011958373.1|4606218_4606743_-	NADH-quinone oxidoreductase subunit C	NA	NA	NA	NA	NA
WP_011958374.1|4606781_4607285_-	NADH-quinone oxidoreductase subunit B 2	NA	NA	NA	NA	NA
WP_011958375.1|4607275_4607632_-	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA	NA
WP_011958376.1|4607747_4608275_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	46.5	3.7e-20
WP_011958377.1|4608276_4609533_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_011958378.1|4609566_4610337_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011958379.1|4610414_4611407_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_011958380.1|4611488_4611947_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011958381.1|4612004_4612451_-	septum formation initiator family protein	NA	NA	NA	NA	NA
WP_011958382.1|4612541_4612973_-	polymer-forming cytoskeletal protein	NA	NA	NA	NA	NA
WP_041334117.1|4613107_4613899_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_041334119.1|4614036_4614534_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_011958385.1|4614810_4615041_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0C5KMI2	ANMV-1_virus	60.4	1.5e-10
WP_157041159.1|4615611_4615950_-	DUF86 domain-containing protein	NA	NA	NA	NA	NA
WP_011958387.1|4616028_4616853_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011958388.1|4616889_4617831_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011958389.1|4618503_4619634_-	sodium ion-translocating decarboxylase subunit beta	NA	NA	NA	NA	NA
WP_157041384.1|4619649_4620108_-	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA	NA
WP_011958391.1|4620107_4620452_-	OadG family protein	NA	NA	NA	NA	NA
WP_083763379.1|4620590_4622093_-	methylmalonyl-CoA carboxyltransferase	NA	NA	NA	NA	NA
WP_011958393.1|4622342_4623248_+	sugar kinase	NA	NA	NA	NA	NA
WP_011958394.1|4623294_4623819_-	PH domain-containing protein	NA	NA	NA	NA	NA
WP_011958395.1|4623837_4625085_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA	NA
WP_011958396.1|4625093_4626347_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA	NA
WP_011958397.1|4626518_4627295_-	histidinol-phosphatase	NA	NA	NA	NA	NA
WP_011958399.1|4630800_4631763_+|transposase	IS110-like element ISRfsp2 family transposase	transposase	NA	NA	NA	NA
WP_011958400.1|4631877_4633602_-	NAD-dependent malic enzyme	NA	NA	NA	NA	NA
WP_011958401.1|4633731_4635744_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_011958402.1|4637359_4640617_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	32.9	2.3e-27
WP_157041160.1|4640623_4641124_-	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA	NA
WP_157041161.1|4641232_4642195_+	glycine cleavage system protein T	NA	NA	NA	NA	NA
WP_011958405.1|4642220_4643180_-	Uma2 family endonuclease	NA	NA	NA	NA	NA
WP_011958406.1|4643247_4644240_-	Uma2 family endonuclease	NA	NA	NA	NA	NA
WP_011958407.1|4644334_4645333_-	Uma2 family endonuclease	NA	NA	NA	NA	NA
WP_011958408.1|4645406_4647200_-	cellulase family glycosylhydrolase	NA	NA	NA	NA	NA
WP_011958409.1|4647345_4649151_-	cellulase family glycosylhydrolase	NA	NA	NA	NA	NA
WP_011958410.1|4649283_4650453_-|protease	trypsin-like serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	26.9	3.1e-19
