The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_009483	Geobacter uraniireducens Rf4, complete genome	5136364	65147	146431	5136364	transposase,tRNA	Staphylococcus_phage(14.29%)	52	NA	NA
WP_157046093.1|65147_65603_+|tRNA	tRNA-specific adenosine deaminase	tRNA	A0A2H4PQS8	Staphylococcus_phage	29.5	2.9e-05
WP_083764729.1|66471_71754_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_157046094.1|71810_72314_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_011937005.1|72313_73312_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_011937006.1|73424_74018_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011937007.1|74014_74977_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157046095.1|75271_75952_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011937010.1|76776_77028_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011937011.1|77042_77855_-	AAA family ATPase	NA	A0A059NT77	Lactococcus_phage	39.1	1.4e-31
WP_011937012.1|77844_79293_-|transposase	IS21-like element ISGur8 family transposase	transposase	NA	NA	NA	NA
WP_041245189.1|80221_85384_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011937014.1|85415_86372_+|transposase	IS1595-like element ISGur2 family transposase	transposase	NA	NA	NA	NA
WP_011937015.1|86377_92233_+	APHP domain-containing protein	NA	NA	NA	NA	NA
WP_011937016.1|92422_93313_+	methylisocitrate lyase	NA	NA	NA	NA	NA
WP_011937017.1|93309_94428_+	2-methylcitrate synthase	NA	NA	NA	NA	NA
WP_011937018.1|94435_95881_+	bifunctional 2-methylcitrate dehydratase/aconitate hydratase	NA	NA	NA	NA	NA
WP_011937019.1|96021_96603_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_011937020.1|97074_103743_+	CxxxxCH/CxxCH domain-containing protein	NA	NA	NA	NA	NA
WP_011937021.1|103751_108068_+	CxxxxCH/CxxCH domain-containing protein	NA	NA	NA	NA	NA
WP_157046096.1|108081_115629_+	CxxxxCH/CxxCH domain-containing protein	NA	NA	NA	NA	NA
WP_011937023.1|115980_116289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041245190.1|116550_117519_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_011937025.1|117730_118162_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_011937026.1|118219_118684_+	DUF2318 domain-containing protein	NA	NA	NA	NA	NA
WP_011937027.1|118683_119844_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011937028.1|119948_120635_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	2.1e-31
WP_011937029.1|120704_121823_+	PAS domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	28.0	6.4e-22
WP_011937030.1|121819_123178_+	sigma-54-dependent Fis family transcriptional regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	32.2	1.3e-05
WP_157046097.1|123346_123514_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011937031.1|123751_124279_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011937032.1|124888_126163_+	TolC family protein	NA	NA	NA	NA	NA
WP_011937033.1|126273_127680_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_011937034.1|127923_131070_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.9	9.2e-66
WP_011937035.1|131157_131634_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041245191.1|131699_132635_+	GerMN domain-containing protein	NA	NA	NA	NA	NA
WP_041245631.1|132677_133082_+	cytochrome c	NA	NA	NA	NA	NA
WP_011937038.1|133159_133672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049818856.1|133690_134017_+	proline reductase	NA	NA	NA	NA	NA
WP_011937039.1|134191_134974_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_011937040.1|135042_135960_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011937041.1|136134_136734_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011937042.1|136842_137520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049818857.1|137541_138300_-	thioredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_011937044.1|138710_139319_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_011937045.1|139318_140434_+	DUF2275 domain-containing protein	NA	NA	NA	NA	NA
WP_011937046.1|140568_141348_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011937047.1|141536_141914_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157046098.1|141973_142402_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011937049.1|142484_142940_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_041245193.1|143067_143916_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_011937051.1|144042_145224_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	47.6	2.4e-43
WP_011937052.1|145189_146431_-|transposase	ISL3-like element ISGur7 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NC_009483	Geobacter uraniireducens Rf4, complete genome	5136364	1989380	1997947	5136364	tRNA	uncultured_Mediterranean_phage(66.67%)	8	NA	NA
WP_083765041.1|1989380_1990424_+	SpoIID/LytB domain-containing protein	NA	Q2XU88	Pseudomonas_phage	31.1	1.7e-21
WP_011938616.1|1990426_1991458_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_011938617.1|1991466_1992582_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	47.1	4.7e-89
WP_011938618.1|1992660_1992981_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	41.9	1.3e-12
WP_011938619.1|1993012_1994614_+	protein translocase subunit SecD	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	25.3	1.7e-07
WP_011938620.1|1994626_1995535_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	41.2	4.8e-44
WP_011938621.1|1995546_1996110_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_011938622.1|1996225_1997947_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	33.0	6.1e-80
>prophage 3
NC_009483	Geobacter uraniireducens Rf4, complete genome	5136364	3329454	3340489	5136364	transposase,integrase	Virus_Rctr41k(50.0%)	12	3325479:3325491	3335645:3335657
3325479:3325491	attL	CGCCAGTTCGTCG	NA	NA	NA	NA
WP_011939716.1|3329454_3330813_-|integrase	integron integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	39.9	1.6e-54
WP_011939717.1|3330986_3331373_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011939265.1|3331528_3332704_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_157046193.1|3332700_3332871_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011939718.1|3333222_3334062_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	28.4	2.6e-23
WP_011939719.1|3334064_3334634_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_011939720.1|3334678_3335416_-	ATPase	NA	A0A059NT77	Lactococcus_phage	35.3	1.4e-33
WP_011939721.1|3335402_3336923_-|transposase	IS21-like element ISGur15 family transposase	transposase	NA	NA	NA	NA
3335645:3335657	attR	CGACGAACTGGCG	NA	NA	NA	NA
WP_157046218.1|3337043_3337619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011939723.1|3337937_3338558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083764910.1|3338620_3339187_+	DEAD/DEAH box helicase	NA	A0A1P8VW10	Streptomyces_phage	35.1	1.2e-05
WP_011937500.1|3339247_3340489_+|transposase	ISL3-like element ISGur7 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NC_009483	Geobacter uraniireducens Rf4, complete genome	5136364	3601871	3684577	5136364	transposase,integrase	Paenibacillus_phage(42.86%)	36	3618060:3618078	3682785:3682803
WP_049818937.1|3601871_3603197_+|integrase	site-specific integrase	integrase	A0A1X9SGU9	Bradyrhizobium_phage	27.5	1.1e-23
WP_011939921.1|3603320_3603923_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_041245500.1|3604897_3605368_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049818938.1|3608332_3609676_+	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA	NA
WP_041245501.1|3609928_3610531_+	TolC family protein	NA	NA	NA	NA	NA
WP_041245502.1|3610503_3611013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083764914.1|3610883_3611243_+	TolC family protein	NA	NA	NA	NA	NA
WP_011939923.1|3611297_3612302_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_011939924.1|3612298_3613819_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_011939925.1|3613914_3615147_-	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_011939926.1|3615182_3618971_-	polyketide synthase	NA	D0R7J2	Paenibacillus_phage	29.6	5.7e-30
3618060:3618078	attL	GTTTCCTCCGTCTTCATGG	NA	NA	NA	NA
WP_011939927.1|3618954_3640428_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011939928.1|3640745_3644693_-	polyketide synthase	NA	NA	NA	NA	NA
WP_011939929.1|3644676_3659286_-	SDR family NAD(P)-dependent oxidoreductase	NA	D0R7J2	Paenibacillus_phage	31.4	3.8e-37
WP_011939930.1|3659288_3664442_-	KR domain-containing protein	NA	D0R7J2	Paenibacillus_phage	35.0	2.0e-33
WP_011937053.1|3665128_3666343_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	47.1	1.6e-50
WP_011939931.1|3666466_3666625_-	rubredoxin	NA	NA	NA	NA	NA
WP_011939932.1|3666679_3667816_-	aminotransferase class V-fold PLP-dependent enzyme	NA	A0A1X7QGF3	Faustovirus	26.0	7.2e-21
WP_083764916.1|3667924_3668968_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_011939935.1|3669962_3670763_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011939936.1|3670972_3673267_-	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_011939937.1|3673284_3674250_-	acyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_157046229.1|3674285_3675131_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA	NA
WP_011939939.1|3675148_3675850_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_041245504.1|3675916_3676168_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041245505.1|3676201_3676474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011939940.1|3677310_3678183_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	28.3	1.5e-21
WP_011939941.1|3678182_3679280_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_157046230.1|3679358_3679505_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011939942.1|3679720_3680470_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_157046231.1|3680390_3681158_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
WP_083764920.1|3681276_3681573_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083764922.1|3681906_3682371_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041245508.1|3682394_3682658_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083764924.1|3682754_3683483_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
3682785:3682803	attR	GTTTCCTCCGTCTTCATGG	NA	NA	NA	NA
WP_011939944.1|3683779_3684577_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
