The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_009665	Shewanella baltica OS185, complete genome	5229686	642270	710347	5229686	integrase,transposase	Cedratvirus(33.33%)	33	633047:633061	692218:692232
633047:633061	attL	TGTACTGACTATATC	NA	NA	NA	NA
WP_006083191.1|642270_643593_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_006083190.1|643576_645130_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_006083189.1|645122_647204_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006083188.1|647203_647731_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006083187.1|647810_648248_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006083186.1|648244_650398_+	AAA family ATPase	NA	A0A285PXL3	Cedratvirus	27.7	1.3e-26
WP_006083185.1|651162_651441_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006079577.1|651437_652547_-|transposase	ISAs1-like element ISSba2 family transposase	transposase	NA	NA	NA	NA
WP_006083183.1|658563_659733_+	nucleotide sugar dehydrogenase	NA	O41091	Paramecium_bursaria_Chlorella_virus	41.6	1.6e-79
WP_006083178.1|660387_661497_-|transposase	ISAs1-like element ISSba2 family transposase	transposase	NA	NA	NA	NA
WP_006083180.1|661751_662429_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006083179.1|662548_663406_+	DUF1835 domain-containing protein	NA	NA	NA	NA	NA
WP_006083178.1|663513_664623_+|transposase	ISAs1-like element ISSba2 family transposase	transposase	NA	NA	NA	NA
WP_006083177.1|665080_665335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006083176.1|665666_666068_+	DUF4354 family protein	NA	NA	NA	NA	NA
WP_086012034.1|666131_666293_+	thyroid hormone receptor interactor 11-like protein	NA	NA	NA	NA	NA
WP_006083175.1|666440_668729_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006083174.1|669782_676373_+	insecticidal toxin complex/plasmid virulence protein	NA	NA	NA	NA	NA
WP_006083173.1|676465_681088_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006083172.1|681392_684269_+	RHS repeat protein	NA	NA	NA	NA	NA
WP_006083171.1|685086_687951_+	RHS repeat-associated core domain-containing protein	NA	NA	NA	NA	NA
WP_006083170.1|688114_688675_+	recombinase family protein	NA	A0A1W5LU24	Ralstonia_phage	41.4	3.8e-31
WP_006083169.1|692086_692533_-	hypothetical protein	NA	NA	NA	NA	NA
692218:692232	attR	TGTACTGACTATATC	NA	NA	NA	NA
WP_006083168.1|692519_693143_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_012088171.1|693477_696420_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012088172.1|697295_700202_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006087485.1|701548_702118_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006083164.1|702181_702631_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006083163.1|702633_705480_+	pilus assembly protein PapC	NA	NA	NA	NA	NA
WP_006083162.1|705472_706207_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006083161.1|706208_707216_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006083160.1|708058_708610_+	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_006083112.1|709246_710347_-|transposase	ISAs1-like element ISSba1 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NC_009665	Shewanella baltica OS185, complete genome	5229686	841255	891901	5229686	integrase,protease,terminase,transposase,portal	Vibrio_phage(20.0%)	59	837615:837630	891592:891607
837615:837630	attL	GCTGACTCAGATCATT	NA	NA	NA	NA
WP_006083055.1|841255_842608_-|protease	DegQ family serine endoprotease	protease	A0A1B1IRD3	uncultured_Mediterranean_phage	27.6	4.4e-09
WP_012088238.1|843021_844134_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_012088240.1|844424_844853_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_006083052.1|844867_845260_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_006083051.1|845413_845602_+	DUF2065 domain-containing protein	NA	NA	NA	NA	NA
WP_012088242.1|845674_846970_+	adenylosuccinate synthase	NA	A0A2R8FF47	Brazilian_cedratvirus	36.7	1.9e-65
WP_012088243.1|847094_847751_+	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_006083048.1|847790_850214_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	32.3	8.1e-62
WP_006083047.1|850214_850955_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_012088244.1|851099_852542_-	MFS transporter	NA	NA	NA	NA	NA
WP_012088245.1|852779_853523_-	DUF481 domain-containing protein	NA	NA	NA	NA	NA
WP_006083044.1|853736_854132_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_006083043.1|854140_854446_+	primosomal replication protein N	NA	NA	NA	NA	NA
WP_006083042.1|854458_854686_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_006086059.1|854722_855175_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_012088246.1|855428_857627_-	S46 family peptidase	NA	NA	NA	NA	NA
WP_006083039.1|857752_859159_+	replicative DNA helicase	NA	A0A1B0VG30	Salmonella_phage	70.8	2.1e-179
WP_012088247.1|859262_860339_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	28.4	9.2e-26
WP_012088248.1|860605_861043_+|transposase	IS200/IS605 family transposase	transposase	Q331U4	Clostridium_botulinum_C_phage	40.0	1.6e-21
WP_006083037.1|861500_861965_-	chemotaxis protein CheX	NA	NA	NA	NA	NA
WP_012088249.1|862815_865008_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_006086056.1|865108_865783_+	PKHD-type hydroxylase	NA	A0A127KM56	Cyanophage	32.5	2.1e-15
WP_012088251.1|866220_866706_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041411001.1|866836_867301_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011847802.1|867499_867769_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_012088252.1|867765_868296_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_012088253.1|868851_869625_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088254.1|869614_870019_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041411002.1|870306_870600_-	hypothetical protein	NA	A0A067ZIA5	Vibrio_phage	38.8	6.0e-12
WP_012088256.1|870596_870917_-	hypothetical protein	NA	K7PKY8	Enterobacterial_phage	38.3	1.3e-12
WP_012088257.1|870913_871522_-	hypothetical protein	NA	A0A2R3UAL4	Myoviridae_environmental_samples	37.9	8.3e-08
WP_012088258.1|871518_871749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012088259.1|871745_872024_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012088260.1|872024_872318_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006082041.1|872348_872696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012088261.1|872721_872982_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012088262.1|872978_873332_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012088263.1|873942_874230_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088264.1|874351_874777_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_041411004.1|874916_875333_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088265.1|875504_876422_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041411005.1|876504_877104_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041411387.1|877505_878201_-	helix-turn-helix transcriptional regulator	NA	R9TNM0	Vibrio_phage	49.8	2.3e-62
WP_012088268.1|878287_878491_+	Cro/Cl family transcriptional regulator	NA	NA	NA	NA	NA
WP_012088269.1|878522_879131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088270.1|879295_880045_+	transcriptional regulator	NA	Q8HA96	Salmonella_phage	46.1	8.4e-34
WP_012088271.1|880041_880728_+	replication protein P	NA	I6PBN0	Cronobacter_phage	28.5	2.0e-10
WP_012088272.1|880717_881974_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A067ZJC5	Vibrio_phage	33.9	5.0e-47
WP_012088273.1|882029_882248_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_012088274.1|882234_882588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088275.1|882596_883211_+	oligoribonuclease	NA	M4M9I5	Vibrio_phage	63.0	3.7e-64
WP_012088276.1|884131_884656_+	lysozyme	NA	A0A1S5R1I9	Pseudomonas_phage	38.6	1.0e-22
WP_012088277.1|884645_885149_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088278.1|885259_885595_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088279.1|885548_886082_+	DNA packaging protein	NA	O64316	Escherichia_phage	49.1	3.1e-35
WP_012088280.1|886056_888054_+|terminase	phage terminase large subunit family protein	terminase	A0A1B0Z2K0	Pseudomonas_phage	49.8	2.6e-191
WP_012088281.1|888083_888290_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088282.1|888339_889914_+|portal	phage portal protein	portal	K7PJP3	Enterobacteria_phage	48.2	4.4e-125
WP_012088283.1|889885_891901_+|protease	Clp protease ClpP	protease	A0A1B0YZU0	Pseudomonas_phage	60.4	4.0e-208
891592:891607	attR	GCTGACTCAGATCATT	NA	NA	NA	NA
>prophage 3
NC_009665	Shewanella baltica OS185, complete genome	5229686	896353	908180	5229686	integrase	Vibrio_phage(62.5%)	9	905980:905992	910453:910465
WP_012088292.1|896353_900274_+	tape measure protein	NA	A0A2I7S9D9	Vibrio_phage	36.6	2.0e-38
WP_012088293.1|900312_900684_+	hypothetical protein	NA	A0A2I7QS24	Vibrio_phage	50.5	6.6e-24
WP_012088294.1|900691_903130_+	hypothetical protein	NA	A0A2I7QXQ4	Vibrio_phage	63.7	6.0e-299
WP_012088295.1|903142_904087_+	hypothetical protein	NA	A0A2I7S8P4	Vibrio_phage	36.1	9.5e-51
WP_012088296.1|904079_904385_+	hypothetical protein	NA	A0A2I7QRU3	Vibrio_phage	36.4	7.9e-07
WP_012088297.1|904381_906142_+	hypothetical protein	NA	A0A088C4B7	Shewanella_sp._phage	59.4	4.0e-143
905980:905992	attL	GGTTGATTTGCCA	NA	NA	NA	NA
WP_011847761.1|906167_906380_+	hypothetical protein	NA	A0A088C533	Shewanella_sp._phage	64.3	3.2e-15
WP_012088298.1|906414_907065_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088299.1|907115_908180_-|integrase	site-specific integrase	integrase	A0A1W6JP34	Morganella_phage	57.5	1.9e-116
910453:910465	attR	GGTTGATTTGCCA	NA	NA	NA	NA
>prophage 4
NC_009665	Shewanella baltica OS185, complete genome	5229686	2029675	2040835	5229686	integrase,transposase	Escherichia_phage(33.33%)	16	2036893:2036907	2049798:2049812
WP_041411108.1|2029675_2030371_+|integrase	integrase	integrase	A0A2D1GLL1	Escherichia_phage	32.0	7.0e-19
WP_012088860.1|2030740_2031700_-|integrase	integron integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	40.4	3.2e-54
WP_012088861.1|2031988_2032852_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_012088862.1|2032830_2033949_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_080514487.1|2034120_2034300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088863.1|2034300_2034567_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088864.1|2034688_2034967_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088865.1|2035047_2035497_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049770353.1|2035471_2035981_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088867.1|2036039_2036648_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041411110.1|2036663_2037092_+	DUF4844 domain-containing protein	NA	NA	NA	NA	NA
2036893:2036907	attL	TTCCTGATGCAGGCA	NA	NA	NA	NA
WP_012088869.1|2037194_2037560_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088870.1|2037621_2037912_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157600318.1|2038031_2038616_+	DUF998 domain-containing protein	NA	NA	NA	NA	NA
WP_012088872.1|2038862_2039948_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_012088873.1|2039944_2040835_-|integrase	tyrosine-type recombinase/integrase	integrase	S5W9T9	Leptospira_phage	29.9	3.5e-23
2049798:2049812	attR	TGCCTGCATCAGGAA	NA	NA	NA	NA
>prophage 5
NC_009665	Shewanella baltica OS185, complete genome	5229686	2204584	2219768	5229686	integrase,transposase	Vibrio_phage(25.0%)	22	2200055:2200068	2217103:2217116
2200055:2200068	attL	CTTTAAAGCCAAAC	NA	NA	NA	NA
WP_012088950.1|2204584_2205532_+	DNA ligase	NA	A0A1X9VNU1	Mimivirus	31.9	2.1e-29
WP_006086382.1|2205576_2206647_-	type I restriction endonuclease subunit R	NA	A0A1S5SAB0	Streptococcus_phage	41.0	1.0e-69
WP_086012318.1|2206837_2207996_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	35.2	7.1e-48
WP_012088951.1|2208568_2209753_-|integrase	tyrosine-type recombinase/integrase	integrase	O21925	Phage_21	39.9	2.5e-69
WP_012088952.1|2209742_2209973_-	excisionase	NA	NA	NA	NA	NA
WP_012088953.1|2209969_2210326_-	hypothetical protein	NA	A0A2D0YGQ8	Vibrio_phage	52.6	1.2e-22
WP_012088954.1|2210504_2210819_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012088955.1|2210815_2211136_-	hypothetical protein	NA	K7PKY8	Enterobacterial_phage	38.3	1.9e-11
WP_012088956.1|2211132_2211363_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012088957.1|2211359_2211638_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012088958.1|2211638_2211917_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012088959.1|2211913_2212978_-	DGQHR domain-containing protein	NA	T1SBJ4	Salmonella_phage	38.2	6.7e-29
WP_012088960.1|2212974_2213604_-	hypothetical protein	NA	A0A076G7C3	Sinorhizobium_phage	37.8	1.4e-29
WP_012088961.1|2213634_2213982_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012088962.1|2214108_2214471_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012088963.1|2215126_2215792_-	LexA family transcriptional regulator	NA	A0A1V0E8B5	Vibrio_phage	55.6	7.3e-66
WP_012088964.1|2215904_2216195_+	helix-turn-helix transcriptional regulator	NA	A0A1V0E8C7	Vibrio_phage	64.2	8.5e-19
WP_012088965.1|2216226_2216850_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088966.1|2216855_2217182_+	hypothetical protein	NA	NA	NA	NA	NA
2217103:2217116	attR	GTTTGGCTTTAAAG	NA	NA	NA	NA
WP_012088967.1|2217345_2218083_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012088968.1|2218227_2219085_+	transcriptional regulator	NA	A5LH71	Enterobacteria_phage	46.2	8.6e-35
WP_012088969.1|2219081_2219768_+	replication protein P	NA	I6PBN0	Cronobacter_phage	28.5	2.6e-10
>prophage 6
NC_009665	Shewanella baltica OS185, complete genome	5229686	2332794	2338025	5229686		uncultured_Caudovirales_phage(16.67%)	10	NA	NA
WP_012089038.1|2332794_2334087_-	DUF3596 domain-containing protein	NA	A0A2H4JGM5	uncultured_Caudovirales_phage	36.2	2.7e-56
WP_012089039.1|2334086_2334299_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_012089040.1|2334402_2334750_-	hypothetical protein	NA	Q7Y3W7	Yersinia_phage	37.1	7.1e-12
WP_012089042.1|2334746_2335355_-	hypothetical protein	NA	A0A2R3UAL4	Myoviridae_environmental_samples	37.9	8.3e-08
WP_012089043.1|2335351_2335582_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011847799.1|2335578_2335857_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012089044.1|2335857_2336151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012089045.1|2336362_2337013_-	hypothetical protein	NA	H2BDG4	Pseudomonas_virus	40.2	9.5e-34
WP_012089046.1|2337009_2337399_-	hypothetical protein	NA	A0A1I9SEY3	Klebsiella_phage	53.4	3.3e-26
WP_012089047.1|2337395_2338025_-	hypothetical protein	NA	A0A076G7C3	Sinorhizobium_phage	37.8	3.0e-29
>prophage 7
NC_009665	Shewanella baltica OS185, complete genome	5229686	2487971	2499131	5229686		Shigella_phage(55.56%)	16	NA	NA
WP_012089140.1|2487971_2488592_+	regulatory protein GemA	NA	Q6QIE7	Burkholderia_phage	39.2	1.9e-15
WP_012089141.1|2488584_2489040_+	transcriptional regulator	NA	A0A0C4UQZ9	Shigella_phage	39.0	1.2e-14
WP_012089142.1|2489086_2489617_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041411146.1|2489664_2490102_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012089144.1|2490148_2490877_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086014179.1|2491060_2491339_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012089146.1|2491328_2491895_+	lysozyme	NA	A0A0A1I5L5	Burkholderia_phage	41.8	1.9e-22
WP_012089147.1|2491891_2492476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012089148.1|2492572_2492797_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012089149.1|2492793_2493129_+	DUF2730 domain-containing protein	NA	NA	NA	NA	NA
WP_012089150.1|2493128_2493425_+	hypothetical protein	NA	A0A2I7S9D8	Vibrio_phage	53.1	5.1e-19
WP_012089151.1|2493427_2493997_+	DUF3486 family protein	NA	A0A0C4UQU5	Shigella_phage	58.1	4.5e-48
WP_012089152.1|2494141_2495782_+	hypothetical protein	NA	A0A2I7S9C5	Vibrio_phage	63.0	1.0e-164
WP_012089153.1|2495781_2497368_+	DUF935 domain-containing protein	NA	A0A0C4UQR8	Shigella_phage	44.9	2.3e-118
WP_012089154.1|2497360_2498674_+	phage morphogenesis protein	NA	A0A0C4UQY9	Shigella_phage	41.7	5.7e-94
WP_012089155.1|2498678_2499131_+	phage virion morphogenesis protein	NA	A0A0C4UR01	Shigella_phage	46.8	3.9e-18
>prophage 8
NC_009665	Shewanella baltica OS185, complete genome	5229686	2629685	2641230	5229686	tRNA	uncultured_Caudovirales_phage(28.57%)	13	NA	NA
WP_012089234.1|2629685_2630957_-	Bcr/CflA family multidrug efflux MFS transporter	NA	S4TR35	Salmonella_phage	24.8	2.3e-15
WP_011846842.1|2631072_2631975_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_006081638.1|2632392_2633052_+	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	43.9	5.6e-34
WP_012089235.1|2633121_2633511_+	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	40.2	1.8e-19
WP_012089236.1|2633525_2633882_+	sulfurtransferase complex subunit TusC	NA	NA	NA	NA	NA
WP_006081641.1|2633881_2634163_+	sulfurtransferase complex subunit TusB	NA	NA	NA	NA	NA
WP_006081642.1|2634156_2634495_+	TusE/DsrC/DsvC family sulfur relay protein	NA	NA	NA	NA	NA
WP_006081643.1|2634639_2634762_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006087497.1|2634781_2636068_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	46.0	8.8e-100
WP_006081645.1|2636086_2636461_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	37.4	7.9e-09
WP_012089237.1|2636453_2637785_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	39.0	4.4e-78
WP_011846837.1|2637793_2638420_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_012089238.1|2638476_2641230_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.5	1.9e-83
>prophage 9
NC_009665	Shewanella baltica OS185, complete genome	5229686	2832864	2843166	5229686		Yellowstone_lake_phycodnavirus(12.5%)	13	NA	NA
WP_012089339.1|2832864_2834583_+	acetolactate synthase 3 large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	29.0	5.5e-57
WP_006081846.1|2834582_2835077_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_006081847.1|2835178_2835622_-	Hsp20 family protein	NA	A0A2L0V0Y9	Agrobacterium_phage	51.5	3.7e-21
WP_006081848.1|2835984_2836416_-	nucleoside-diphosphate kinase	NA	K7YW26	Megavirus	40.2	1.1e-17
WP_006081849.1|2836614_2836782_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006081850.1|2836999_2837197_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_006081851.1|2837310_2838216_-	30S ribosomal protein S6--L-glutamate ligase	NA	I3ULC9	Synechococcus_phage	33.6	9.4e-40
WP_006081852.1|2838374_2838713_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_012089340.1|2838721_2840584_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	38.2	2.8e-102
WP_012089341.1|2840651_2841176_-	co-chaperone HscB	NA	NA	NA	NA	NA
WP_006081855.1|2841192_2841516_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	46.3	1.8e-22
WP_006081856.1|2841530_2841914_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	76.6	2.2e-51
WP_006081857.1|2841951_2843166_-	IscS subfamily cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	31.8	5.7e-32
>prophage 10
NC_009665	Shewanella baltica OS185, complete genome	5229686	3724374	3735495	5229686	tRNA	uncultured_Mediterranean_phage(33.33%)	8	NA	NA
WP_012089805.1|3724374_3726999_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.1	1.8e-78
WP_012089806.1|3727341_3727755_-	regulatory protein RecX	NA	NA	NA	NA	NA
WP_011847432.1|3727829_3728897_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	61.9	2.4e-111
WP_012089807.1|3729281_3731852_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.1	3.9e-30
WP_006086853.1|3732055_3733036_-	RNA polymerase sigma factor RpoS	NA	M4SMP8	Cyanophage	32.7	8.4e-34
WP_012089808.1|3733116_3734013_-	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA	NA
WP_006082610.1|3734113_3734749_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.4	5.4e-34
WP_006086855.1|3734745_3735495_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.2	1.3e-71
>prophage 11
NC_009665	Shewanella baltica OS185, complete genome	5229686	3764669	3772436	5229686		Staphylococcus_phage(50.0%)	7	NA	NA
WP_006082639.1|3764669_3765149_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	47.0	2.7e-30
WP_012089823.1|3765279_3766383_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.7	3.4e-68
WP_012089824.1|3766706_3767363_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	34.5	5.1e-27
WP_086014191.1|3767374_3768517_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	36.0	1.0e-51
WP_006082643.1|3768675_3769125_-	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_012089826.1|3769325_3770579_-	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	54.6	1.9e-102
WP_006086878.1|3770768_3772436_+	energy-dependent translational throttle protein EttA	NA	A0A1V0SKJ1	Klosneuvirus	28.0	3.9e-39
>prophage 12
NC_009665	Shewanella baltica OS185, complete genome	5229686	3889913	3901814	5229686	integrase	Escherichia_phage(27.27%)	20	3884949:3884962	3906865:3906878
3884949:3884962	attL	AAAACAACGAATTT	NA	NA	NA	NA
WP_012089898.1|3889913_3891182_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A067ZJC5	Vibrio_phage	33.3	5.2e-44
WP_012089899.1|3891182_3891407_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012089900.1|3891396_3892080_-	replication protein P	NA	I6PBN0	Cronobacter_phage	28.9	2.6e-10
WP_012089901.1|3892076_3892913_-	transcriptional regulator	NA	Q8HA96	Salmonella_phage	44.6	2.5e-31
WP_012089902.1|3893056_3893809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012089903.1|3893972_3894299_-	hypothetical protein	NA	G8CTB7	Vibrio_phage	38.4	6.4e-07
WP_012089904.1|3894304_3894928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041411477.1|3895258_3895489_-	helix-turn-helix domain-containing protein	NA	A0A2D1GLN0	Escherichia_phage	75.0	5.3e-24
WP_157600330.1|3895638_3896322_+	helix-turn-helix domain-containing protein	NA	A0A2D1GM27	Escherichia_phage	70.2	3.4e-90
WP_012089907.1|3896671_3897034_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012089908.1|3897160_3897508_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012089909.1|3897538_3898168_+	hypothetical protein	NA	A0A076G7C3	Sinorhizobium_phage	37.8	8.0e-30
WP_012089910.1|3898164_3898554_+	hypothetical protein	NA	A0A1I9SEY3	Klebsiella_phage	51.7	1.1e-24
WP_012088958.1|3898550_3898829_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012089912.1|3898829_3899108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012089913.1|3899104_3899335_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012089914.1|3899331_3899940_+	hypothetical protein	NA	A0A2R3UAL4	Myoviridae_environmental_samples	39.7	2.2e-08
WP_012089915.1|3899936_3900257_+	hypothetical protein	NA	K7PKY8	Enterobacterial_phage	38.3	7.7e-13
WP_041411478.1|3900378_3900606_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012089917.1|3900608_3901814_-|integrase	site-specific integrase	integrase	A0A291AWU1	Escherichia_phage	51.1	2.1e-119
3906865:3906878	attR	AAAACAACGAATTT	NA	NA	NA	NA
>prophage 13
NC_009665	Shewanella baltica OS185, complete genome	5229686	5010688	5024425	5229686		Bacillus_phage(42.86%)	9	NA	NA
WP_012090568.1|5010688_5015566_-	PAS domain S-box protein	NA	A0A1V0SGX0	Hokovirus	26.1	2.2e-66
WP_006079507.1|5015924_5016650_+	two-component system response regulator OmpR	NA	W8CYM9	Bacillus_phage	34.7	1.7e-31
WP_012090569.1|5016692_5018009_+	two-component system sensor histidine kinase EnvZ	NA	W8CYF6	Bacillus_phage	24.0	1.5e-09
WP_012090570.1|5018138_5020121_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	35.8	6.7e-14
WP_006079504.1|5020198_5020672_-	peroxiredoxin	NA	M1I839	Pelagibacter_phage	47.4	5.5e-23
WP_012090571.1|5020752_5021721_-	GlyGly-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_012090572.1|5022079_5022370_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_012090573.1|5022372_5023068_+	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	26.5	1.1e-06
WP_012090574.1|5023060_5024425_+	GHKL domain-containing protein	NA	W8CYF6	Bacillus_phage	23.6	8.4e-08
>prophage 1
NC_009661	Shewanella baltica OS185 plasmid pS18501, complete sequence	83224	4416	28979	83224	transposase	Acinetobacter_phage(20.0%)	23	NA	NA
WP_080514264.1|4416_4836_+|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
WP_011979485.1|5102_5477_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011839979.1|5473_6043_-	ParA family protein	NA	A0A1B3B0Z9	Gordonia_phage	45.1	3.5e-08
WP_086012318.1|7425_8584_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	35.2	7.1e-48
WP_157600332.1|10309_10588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011979489.1|10734_11355_+	DUF2913 family protein	NA	NA	NA	NA	NA
WP_011979490.1|11447_11720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011979491.1|12046_12289_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	60.0	8.4e-20
WP_011979492.1|12278_12563_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	67.0	6.2e-30
WP_086012320.1|12672_12786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011979493.1|12761_13685_+|transposase	IS5 family transposase	transposase	A0A1V0E8E1	Vibrio_phage	81.8	1.3e-148
WP_150102366.1|13644_13890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011979494.1|13888_14917_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_086012321.1|15140_16318_-|transposase	IS3-like element ISSba5 family transposase	transposase	Q716C2	Shigella_phage	65.5	1.2e-119
WP_148228718.1|17967_18861_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	37.1	1.1e-40
WP_011979498.1|18997_20953_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011979499.1|21806_22499_+|transposase	IS6-like element ISSba18 family transposase	transposase	A0A077SL39	Escherichia_phage	43.7	4.7e-39
WP_011979500.1|22660_23524_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011979501.1|23757_24366_+	resolvase	NA	A0A1V0E035	Clostridioides_phage	31.9	1.2e-09
WP_157600333.1|25340_26087_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041411646.1|26258_26456_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011979504.1|26458_26947_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086012318.1|27820_28979_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	35.2	7.1e-48
