The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_009800	Escherichia coli HS, complete sequence	4643538	194702	256890	4643538	plate,tRNA,protease,transposase	Emiliania_huxleyi_virus(12.5%)	52	NA	NA
WP_001325807.1|194702_196055_+|protease	sigma E protease regulator RseP	protease	NA	NA	NA	NA
WP_001240896.1|196084_198517_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_000758956.1|198638_199124_+	molecular chaperone Skp	NA	NA	NA	NA	NA
WP_001139279.1|199127_200153_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_012135819.1|200257_200713_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_000565966.1|200716_201505_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_000139654.1|201504_202653_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_000569430.1|202649_203246_+	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	40.0	1.0e-26
WP_001294774.1|203282_206765_+	DNA polymerase III subunit alpha	NA	Q8W6C3	Saccharomonospora_phage	36.9	2.2e-209
WP_000055741.1|206777_207737_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA	NA
WP_001020973.1|207835_209977_+	lysine decarboxylase LdcC	NA	NA	NA	NA	NA
WP_000901093.1|210033_210423_+	VOC family protein	NA	NA	NA	NA	NA
WP_000176578.1|210487_211786_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_000062312.1|211834_212095_-	Rho-binding antiterminator	NA	NA	NA	NA	NA
WP_000417058.1|212081_212282_-	YaeP family protein	NA	NA	NA	NA	NA
WP_001185293.1|212447_212993_+	YaeQ family protein	NA	NA	NA	NA	NA
WP_000635545.1|212989_213412_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_000239154.1|213425_214136_+	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA	NA
WP_000399648.1|214385_215366_+|transposase	IS110-like element IS621 family transposase	transposase	NA	NA	NA	NA
WP_001297208.1|215569_216394_-	YaeF family permuted papain-like enzyme	NA	NA	NA	NA	NA
WP_001260712.1|216447_218166_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000094011.1|218277_218985_-|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
WP_001202326.1|218981_219386_-	Rcs stress response system protein RcsF	NA	NA	NA	NA	NA
WP_000874224.1|219503_220319_-	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA	NA
WP_001294600.1|220358_221012_-	methionine ABC transporter permease MetI	NA	NA	NA	NA	NA
WP_000593994.1|221004_222036_-	methionine ABC transporter ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	40.2	7.2e-36
WP_001140174.1|222223_222796_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_000997049.1|228544_229348_+	2,5-didehydrogluconate reductase DkgB	NA	A0A1V0SDE7	Indivirus	36.1	1.2e-38
WP_000648576.1|229344_230259_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001230983.1|230499_231300_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_000211726.1|231377_232148_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000644685.1|232195_233554_-	murein transglycosylase D	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	36.0	5.8e-09
WP_001052750.1|233625_234381_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_001298887.1|234414_235137_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000917888.1|235133_235601_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	58.7	1.0e-50
WP_001297205.1|235665_236397_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	39.0	3.4e-40
WP_001086133.1|236932_237718_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001236649.1|237854_238334_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000908052.1|238343_239258_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001284199.1|239301_239784_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_001087745.1|239807_241160_-	ImpA family type VI secretion system protein	NA	NA	NA	NA	NA
WP_122985538.1|241170_244605_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_001240525.1|244713_246126_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_000088862.1|246130_246874_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
WP_000614342.1|246870_249642_-	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	28.4	4.7e-82
WP_000343298.1|249650_250412_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_000246449.1|250416_251748_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_001080149.1|251750_252275_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_001113725.1|252271_253552_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_000348793.1|253576_254659_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_000393844.1|254622_256473_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_000611742.1|256476_256890_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 2
NC_009800	Escherichia coli HS, complete sequence	4643538	287914	388836	4643538	holin,terminase,coat,integrase,portal,lysis,head,protease,transposase	Enterobacteria_phage(57.58%)	102	296641:296700	356816:358045
WP_000749865.1|287914_288970_-	phosphoporin PhoE	NA	Q1MVN1	Enterobacteria_phage	60.9	2.0e-118
WP_001285288.1|289257_290361_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.1e-61
WP_000893255.1|290372_291626_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.2	5.8e-96
WP_000023575.1|291830_292991_-|integrase	site-specific integrase	integrase	K7P7R5	Enterobacteria_phage	100.0	1.2e-228
WP_001281195.1|293300_293645_-	hypothetical protein	NA	A0A2I6PID6	Escherichia_phage	97.4	3.4e-59
WP_001274538.1|293832_294474_-	DUF550 domain-containing protein	NA	S4TSR6	Salmonella_phage	52.9	1.8e-53
WP_000151159.1|294475_295159_-	ead/Ea22-like family protein	NA	K7P6J7	Enterobacteria_phage	57.5	7.1e-56
WP_001065197.1|295155_295800_-	hypothetical protein	NA	Q1MVG0	Enterobacteria_phage	100.0	1.5e-132
WP_001214454.1|295796_295964_-	DUF2737 family protein	NA	Q716F2	Shigella_phage	98.2	8.6e-24
WP_000740047.1|295980_296295_-	hypothetical protein	NA	K7PLT4	Enterobacteria_phage	99.0	3.5e-50
296641:296700	attL	TGAATCGCCACGGGTTTAACAGACACCTCAGAGTCATTTAAGATGGCTTAAAGAGAGGTG	NA	NA	NA	NA
WP_085949497.1|296703_297850_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	92.6	2.3e-147
WP_000065850.1|298004_298907_-	recombinase RecT	NA	K7PKG9	Enterobacteria_phage	87.1	3.7e-145
WP_000604109.1|298903_299212_-	hypothetical protein	NA	K7PJM4	Enterobacteria_phage	99.0	4.3e-53
WP_001183770.1|299296_299467_-	hypothetical protein	NA	A0A192Y6R1	Salmonella_phage	98.2	1.8e-24
WP_000065354.1|299542_299911_-	DUF2528 family protein	NA	M1FPD2	Enterobacteria_phage	99.2	1.0e-64
WP_000394305.1|300093_300345_-	hypothetical protein	NA	A4KWV4	Enterobacteria_phage	98.8	1.4e-41
WP_000930322.1|300478_300817_-	hypothetical protein	NA	K7PJW2	Enterobacteria_phage	100.0	2.0e-59
WP_000256573.1|300819_301125_-	hypothetical protein	NA	K7PJM7	Enterobacteria_phage	99.0	7.0e-48
WP_001095982.1|301439_302090_-	LexA family transcriptional regulator	NA	K7PM82	Enterobacteria_phage	100.0	4.9e-123
WP_000276885.1|302170_302356_+	Cro/Cl family transcriptional regulator	NA	K7PHK4	Enterobacteria_phage	100.0	1.2e-26
WP_000035948.1|302471_302768_+	hypothetical protein	NA	K7PKU6	Enterobacteria_phage	100.0	2.3e-48
WP_000166207.1|302800_302947_+	DUF2740 family protein	NA	Q687G5	Enterobacteria_phage	100.0	1.1e-19
WP_000065664.1|302939_303839_+	hypothetical protein	NA	A0A0N7C1Z7	Escherichia_phage	99.0	1.8e-163
WP_000131485.1|303828_305265_+	AAA family ATPase	NA	Q8VNP7	Enterobacteria_phage	99.8	1.0e-274
WP_000736913.1|305341_305782_+	recombination protein NinB	NA	M1FPM8	Enterobacteria_phage	100.0	1.2e-80
WP_000984218.1|305778_305952_+	hypothetical protein	NA	I6S1V2	Salmonella_phage	100.0	5.8e-31
WP_000113762.1|305918_306095_+	NinE family protein	NA	I6RSQ2	Salmonella_phage	96.6	1.5e-26
WP_000386658.1|306097_306457_+	DUF2591 family protein	NA	G8EYI2	Enterobacteria_phage	95.0	2.0e-62
WP_000625343.1|306456_306633_+	protein ninF	NA	A0A220NRM2	Escherichia_phage	96.6	4.3e-26
WP_001279422.1|306625_306895_+	hypothetical protein	NA	K7PHK7	Enterobacteria_phage	98.9	4.6e-43
WP_000002243.1|306894_307185_+	DUF1364 domain-containing protein	NA	K7PKV0	Enterobacteria_phage	100.0	3.4e-52
WP_001008188.1|307181_307544_+	RusA family crossover junction endodeoxyribonuclease	NA	K7PMG4	Enterobacteria_phage	100.0	1.6e-62
WP_000994515.1|307540_307729_+	protein ninH	NA	K7PH29	Enterobacteria_phage	100.0	1.9e-27
WP_001235461.1|307725_308349_+	antitermination protein	NA	K7PM87	Enterobacteria_phage	100.0	3.0e-114
WP_000783734.1|309171_309495_+|holin	phage holin, lambda family	holin	G5DA93	Enterobacteria_phage	100.0	1.3e-52
WP_000229399.1|309478_309955_+	glycoside hydrolase family protein	NA	K7PKV2	Enterobacteria_phage	99.4	3.7e-88
WP_000088938.1|309951_310389_+|lysis	lysis protein	lysis	I6RSJ6	Salmonella_phage	97.9	8.5e-71
WP_024186682.1|310588_311107_+	Rha family transcriptional regulator	NA	A0A2D1GLJ3	Escherichia_phage	98.8	2.7e-92
WP_000807788.1|311461_311704_+	DUF2560 family protein	NA	A5VW77	Enterobacteria_phage	100.0	1.3e-36
WP_000113731.1|311706_312147_+	hypothetical protein	NA	C7U0V7	Enterobacteria_phage	100.0	5.9e-80
WP_000200761.1|312143_313559_+|terminase	PBSX family phage terminase large subunit	terminase	A0A088CQ06	Enterobacteria_phage	100.0	4.0e-279
WP_024186683.1|313560_315759_+|portal	portal protein	portal	A0A088CQ69	Enterobacteria_phage	99.5	0.0e+00
WP_000372575.1|315849_316743_+	scaffold protein	NA	A0A088CPT0	Enterobacteria_phage	99.0	4.3e-130
WP_000013273.1|316761_318015_+|coat	coat protein	coat	A0A088CQ56	Enterobacteria_phage	98.6	4.5e-234
WP_001389518.1|318056_318245_+	hypothetical protein	NA	A0A088CPR7	Enterobacteria_phage	100.0	2.9e-28
WP_001140510.1|318225_318687_+|head	head DNA stabilization protein	head	A5VW70	Enterobacteria_phage	100.0	7.1e-84
WP_001122407.1|318696_320115_+	packaged DNA stabilization protein gp10	NA	A0A2D1GM00	Escherichia_phage	99.8	6.4e-277
WP_000785558.1|320114_321068_+	Packaged DNA stabilization protein gp26	NA	Q716G6	Shigella_phage	85.8	4.8e-95
WP_000614049.1|321067_321523_+	DUF2824 family protein	NA	Q716G5	Shigella_phage	99.3	1.8e-87
WP_000964867.1|321525_322218_+	DNA transfer protein	NA	A5VW66	Enterobacteria_phage	97.4	1.7e-113
WP_000246978.1|322228_323614_+	DNA transfer protein	NA	I6RSG0	Salmonella_phage	98.9	1.0e-255
WP_000331836.1|323613_325440_+	hypothetical protein	NA	E7C9U6	Salmonella_phage	77.1	3.9e-234
WP_000717773.1|325461_326100_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001008290.1|326164_326806_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_021518013.1|326905_327079_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048902015.1|327122_327779_+	hypothetical protein	NA	H6WRU8	Salmonella_phage	75.6	4.4e-87
WP_085949497.1|328521_329668_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	92.6	2.3e-147
WP_042041822.1|329851_330139_-	Arc family DNA-binding protein	NA	A0A088CPT2	Enterobacteria_phage	63.2	3.9e-24
WP_000132706.1|330239_332150_+	right-handed parallel beta-helix repeat-containing protein	NA	A0A0U3DL17	Klebsiella_phage	42.1	1.2e-100
WP_000221849.1|332146_332398_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000555017.1|332617_332857_+	hypothetical protein	NA	K7P7N3	Enterobacteria_phage	51.9	7.2e-16
WP_000506723.1|332856_333174_+	hypothetical protein	NA	K7PGV5	Enterobacterial_phage	52.5	2.8e-23
WP_024186684.1|333205_333382_-|integrase	integrase	integrase	A5VW56	Enterobacteria_phage	90.9	9.7e-18
WP_000772656.1|333836_335045_+|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	56.5	7.7e-130
WP_001375306.1|335286_336495_+	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
WP_000132879.1|336487_338194_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_000920175.1|338171_339242_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085962535.1|340897_341500_+	DUF1819 family protein	NA	NA	NA	NA	NA
WP_000566901.1|341496_342099_+	DUF1788 domain-containing protein	NA	NA	NA	NA	NA
WP_001019654.1|342110_345752_+	BREX system P-loop protein BrxC	NA	NA	NA	NA	NA
WP_001095585.1|345797_349415_+	BREX-1 system adenine-specific DNA-methyltransferase PglX	NA	NA	NA	NA	NA
WP_001180887.1|349591_352189_+	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA	NA
WP_001193073.1|352199_354284_+|protease	protease Lon-related BREX system protein BrxL	protease	NA	NA	NA	NA
WP_001013322.1|354548_354974_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000271034.1|354970_355354_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001195464.1|355725_356325_-	inovirus-type Gp2 protein	NA	NA	NA	NA	NA
WP_085949497.1|356878_358025_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	92.6	2.3e-147
WP_001296902.1|358202_358745_-	ECP biosynthesis operon DNA-binding transcriptional regulator EcpR	NA	NA	NA	NA	NA
356816:358045	attR	TGAATCGCCACGGGTTTAACAGACACCTCAGAGTCATTTAAGATGGCTTAAAGAGAGGTGCCCATGAGCGGTAAGCGTTATCCCGAAGAGTTTAAAACTGAAGCAGTCAAACAGGTTGTTGATCGCGGTTATTCTGTTGCCAGCGTTGCAACACGTCTCGATATCACCACCCACAGCCTTTATGCCTGGATAAAGAAGTACGGTCCGGATTCTTCCACTAATAAAGAACAGTCAGATGCTCAGGCCGAGATCCGCCGTCTCCAGAAAGAGCTGAAACGGGTTACCGACGAACGGGACATATTAAAAAAAGCCGCGGCGTACTTCGCAAAGCTGTCCGACTGAGGTACGCCTTTATCCGTGACAACTCCTGTTGCTGGCCTGTTCGCCTGCTCTGTCGGGTGCTGGATGTTCATCCCAGTGGTTTTTACGCCTGGCTTCAGCAGCCGCATTCACAACGCCATCAGGCAGACCTGAGACTGACAGGACAGATTAAACAGTTCTGGCTGGAATCGGGATGCGTCTATGGTTATCGCAAAATCCATCTGGATTTGCGTGACAGCGGGCAACAGTGCGGAGTAAACAGAGTCTGGAGACTGATGAAACGTGTCGGAATAAAGGCTCAGGTCGGATACCGAAGCCCGCGGGCACGTAAAGGCGAGGCCAGTATCGTGTCACCCAACAGGCTCCAGCGACAGTTCAATCCGGATGCTCCTGATGAGCGTTGGGTAACGGACATAACCTACATCAGGACCCACGAAGGCTGGCTGTATCTTGCCGTTGTTGTTGATCTGTTCTCACGCAAAATTATCGGCTGGTCCATGCAATCCCGGATGACAAAGGACATTGTCCTGAACGCACTGCTGATGGCTGTATGGCGGCGTAATCCCGAAAAACAGGTGCTGGTTCATTCGGATCAGGGCAGTCAGTACACAAGCCATGAGTGGCAGTCGTTCCTGAAATCACACGGCCTGGAGGGTAGCATGAGCCGTCGCGGTAACTGCCATGATAATGCGGTTGCAGAAAGTTTTTTCCAGTTGTTGAAACGTGAACGGATAAAGAAAAAGATCTACGGAACGCGGGAAGAAGCCCGCAGTGATATTTTTGATTACATCGAAATGTTTTATAACAGTAAGCGTCGGCATGGTTCTAGCGAACAGATGTCACCGACAGAATATGAAAACCAGTATTATCAACGGCTCGGAAGTGTCTAGATTATCCGTGGCGATTCAC	NA	NA	NA	NA
WP_001147277.1|359567_359795_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000866436.1|359829_359970_-	50S ribosomal protein L36	NA	NA	NA	NA	NA
WP_000803990.1|359969_360233_-	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_000662258.1|360596_360698_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000092536.1|361813_366067_+	intimin-like adhesin FdeC	NA	NA	NA	NA	NA
WP_000621018.1|366187_367045_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001299025.1|367293_368163_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	41.7	9.3e-53
WP_001299021.1|368322_368916_-	reactive chlorine species resistance protein RclC	NA	NA	NA	NA	NA
WP_000474084.1|368927_369164_-	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
WP_001046304.1|369272_370598_-	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	47.8	1.1e-113
WP_000339593.1|370823_371678_+	DNA-binding transcriptional regulator RclR	NA	NA	NA	NA	NA
WP_001102119.1|372204_372924_+	(Fe-S)-binding protein	NA	NA	NA	NA	NA
WP_000023907.1|372934_374362_+	iron-sulfur cluster-binding protein	NA	NA	NA	NA	NA
WP_000370401.1|374354_375050_+	lactate utilization protein C	NA	NA	NA	NA	NA
WP_001209105.1|375292_375961_-	membrane protein	NA	NA	NA	NA	NA
WP_071593451.1|376123_377317_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_001406334.1|378462_379224_-	protein HyxA	NA	NA	NA	NA	NA
WP_001315275.1|379377_380172_-	LuxR family transcriptional regulator HyxR	NA	NA	NA	NA	NA
WP_000338364.1|380501_381023_-	tyrosine-type DNA invertase FimX	NA	A0A2L1IV36	Escherichia_phage	53.5	7.5e-50
WP_157903494.1|382087_382222_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001159102.1|382916_384587_-|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	31.2	4.7e-61
WP_000089082.1|384600_386073_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_001295527.1|386086_386674_-	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_000131044.1|386802_388836_+|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	27.4	3.4e-21
>prophage 3
NC_009800	Escherichia coli HS, complete sequence	4643538	884436	985774	4643538	capsid,terminase,tail,integrase,portal,lysis,plate,head,protease,transposase	Salmonella_phage(62.96%)	107	876362:876377	951275:951290
876362:876377	attL	CAGCGCCACCGCCAGT	NA	NA	NA	NA
WP_000399648.1|884436_885417_+|transposase	IS110-like element IS621 family transposase	transposase	NA	NA	NA	NA
WP_000168787.1|885677_886943_-	DUF1479 domain-containing protein	NA	NA	NA	NA	NA
WP_000114291.1|887094_887910_-	sugar-phosphatase YbiV	NA	NA	NA	NA	NA
WP_000209326.1|888055_890488_-	glycyl radical protein	NA	A0A076YHZ7	Citrobacter_phage	43.5	6.1e-09
WP_001338400.1|890493_891393_-	glycyl-radical enzyme activating protein	NA	NA	NA	NA	NA
WP_001301278.1|891523_892186_+	fructose-6-phosphate aldolase	NA	C7BV14	Synechococcus_phage	32.2	8.2e-25
WP_000829242.1|892261_893011_-	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA	NA
WP_000397371.1|893010_894246_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_000513789.1|894449_895415_+	beta-aspartyl-peptidase	NA	NA	NA	NA	NA
WP_012135848.1|895401_897273_+	glutathione ABC transporter ATP-binding protein GsiA	NA	G9BWD6	Planktothrix_phage	29.7	8.8e-16
WP_000090159.1|897292_898831_+	glutathione ABC transporter substrate-binding protein GsiB	NA	NA	NA	NA	NA
WP_000936043.1|898848_899769_+	glutathione ABC transporter permease GsiC	NA	NA	NA	NA	NA
WP_001236046.1|899771_900683_+	glutathione ABC transporter permease GsiD	NA	NA	NA	NA	NA
WP_012135849.1|900860_903209_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_000086877.1|903216_904545_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_001280945.1|904614_904944_-	DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000539521.1|904933_905320_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_000049367.1|905545_906871_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_000497137.1|907083_907467_+	biofilm formation regulator BssR	NA	NA	NA	NA	NA
WP_012135850.1|908689_909316_-	glutathione S-transferase GstB	NA	NA	NA	NA	NA
WP_001300708.1|909562_910765_+	serine-type D-Ala-D-Ala carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	48.0	1.1e-99
WP_000450121.1|910811_911570_-	DNA-binding transcriptional repressor DeoR	NA	NA	NA	NA	NA
WP_001295291.1|911627_912224_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_001180090.1|912508_913741_+	multidrug efflux MFS transporter MdfA	NA	NA	NA	NA	NA
WP_000605478.1|913781_914066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012135851.1|914151_914967_-	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase	NA	NA	NA	NA	NA
WP_000217864.1|914966_916175_-	MFS transporter	NA	NA	NA	NA	NA
WP_001741476.1|916258_916795_+	DNA-binding transcriptional regulator RcdA	NA	NA	NA	NA	NA
WP_001032044.1|916945_917215_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000290938.1|917272_918304_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A218M4I3	Erwinia_phage	56.1	1.9e-105
WP_001513672.1|918492_918684_-	hypothetical protein	NA	A0A0R6PIH8	Moraxella_phage	65.9	6.8e-09
WP_001047320.1|918699_919269_-	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	43.9	2.9e-39
WP_001247707.1|919394_919616_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000460891.1|919648_920158_+	phage regulatory CII family protein	NA	E5G6L3	Salmonella_phage	98.2	1.3e-86
WP_000956182.1|920165_920366_+	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	98.5	7.1e-33
WP_012135853.1|920329_920671_+	DUF5347 domain-containing protein	NA	E5G6L5	Salmonella_phage	96.5	1.9e-54
WP_001244166.1|920738_920972_+	DUF2732 family protein	NA	E5G6L6	Salmonella_phage	96.1	9.2e-32
WP_000752614.1|920971_921199_+	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	98.7	7.8e-36
WP_000104158.1|921195_922053_+	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	97.5	1.6e-161
WP_000017485.1|922049_924464_+	replication endonuclease	NA	E5G6L9	Salmonella_phage	97.9	0.0e+00
WP_001154431.1|924618_924807_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	96.8	1.6e-26
WP_001217575.1|924817_925051_+	DinI family protein	NA	E5G6M1	Salmonella_phage	100.0	4.7e-36
WP_000700647.1|925164_925842_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001003256.1|926127_927519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000520350.1|927546_928572_-|portal	phage portal protein	portal	E5G6M3	Salmonella_phage	89.1	2.9e-170
WP_001098431.1|928571_930338_-|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	99.7	0.0e+00
WP_000216237.1|930480_931314_+|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	91.0	2.8e-123
WP_000742514.1|931330_932389_+|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	92.6	1.3e-181
WP_000059186.1|932392_933043_+|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	95.8	1.9e-111
WP_000673498.1|933138_933603_+|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.0	9.3e-76
WP_000868175.1|933602_933806_+|tail	tail protein X	tail	E5G6M9	Salmonella_phage	92.5	1.4e-31
WP_000171568.1|933809_934025_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	80.3	1.8e-26
WP_001069905.1|934005_934518_+	lysozyme	NA	E5G6N1	Salmonella_phage	92.3	3.1e-88
WP_000727853.1|934519_934897_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	40.0	2.3e-16
WP_012135855.1|934893_935322_+|lysis	LysB family phage lysis regulatory protein	lysis	E5G6N2	Salmonella_phage	78.0	9.9e-48
WP_001039931.1|935417_935849_+|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	92.3	1.1e-70
WP_000829119.1|935841_936288_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	86.3	2.3e-63
WP_000993757.1|936356_936935_+|plate	phage baseplate assembly protein V	plate	A0A1S6KZX7	Salmonella_phage	87.0	9.4e-94
WP_000177590.1|936931_937291_+	GPW/gp25 family protein	NA	A0A1S6KZZ4	Salmonella_phage	86.6	9.5e-52
WP_000268276.1|937277_938186_+|plate	baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	90.4	7.8e-143
WP_001086821.1|938178_938784_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	92.0	6.8e-111
WP_000104758.1|938780_940532_+|tail	phage tail protein	tail	A0A0F7LDR4	Escherichia_phage	50.2	6.4e-85
WP_000994388.1|940531_940945_+|tail	tail fiber assembly protein	tail	U5P0S4	Shigella_phage	73.0	5.8e-21
WP_000046141.1|941051_942224_+|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	90.3	4.6e-204
WP_001207660.1|942233_942749_+|tail	phage major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.3	2.1e-89
WP_001281004.1|942803_943106_+|tail	phage tail assembly protein	tail	A0A1S6KZZ9	Salmonella_phage	91.0	3.7e-41
WP_000763311.1|943120_943240_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.8e-13
WP_001282791.1|943232_946310_+|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	63.0	0.0e+00
WP_000980392.1|946306_946792_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	80.6	3.7e-67
WP_001011777.1|946788_947889_+	phage late control D family protein	NA	A0A1S6KZZ5	Salmonella_phage	87.2	1.4e-175
WP_000972391.1|947979_948198_+	ogr/Delta-like zinc finger family protein	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
WP_001024876.1|948433_950119_-	aspartate:alanine antiporter	NA	NA	NA	NA	NA
WP_000681108.1|950388_950766_+	inner membrane protein YbjM	NA	NA	NA	NA	NA
WP_001195225.1|950795_951053_-	glutaredoxin 1	NA	A0A2I7SAE2	Vibrio_phage	61.9	3.0e-23
WP_001201560.1|951212_951500_+	DUF1418 family protein	NA	NA	NA	NA	NA
951275:951290	attR	ACTGGCGGTGGCGCTG	NA	NA	NA	NA
WP_000189162.1|951483_952206_+	nitroreductase NfsA	NA	NA	NA	NA	NA
WP_000684321.1|952266_953169_+	30S ribosomal protein S6--L-glutamate ligase	NA	I3ULC9	Synechococcus_phage	34.4	2.6e-37
WP_000203025.1|953256_953733_+	YbjN domain-containing protein	NA	NA	NA	NA	NA
WP_000126069.1|954083_955196_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA	NA
WP_000996005.1|955290_956424_+	putrescine ABC transporter ATP-binding subunit PotG	NA	G3M9Y6	Bacillus_virus	34.0	1.4e-29
WP_000105444.1|956433_957387_+	putrescine ABC transporter permease PotH	NA	NA	NA	NA	NA
WP_001061665.1|957383_958229_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
WP_000389260.1|958288_958777_+	YbjO family protein	NA	NA	NA	NA	NA
WP_001149740.1|958817_959945_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	A0A1X9I6F4	Streptococcus_phage	27.0	6.0e-28
WP_001295905.1|960143_960875_-	ABC transporter substrate-binding protein ArtJ	NA	NA	NA	NA	NA
WP_000464491.1|961100_961769_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA	NA
WP_001001691.1|961768_962485_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA	NA
WP_000756569.1|962491_963223_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000027205.1|963240_963969_-	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	36.7	6.0e-29
WP_001270734.1|964186_964702_-	lipoprotein	NA	NA	NA	NA	NA
WP_001160737.1|964827_965151_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001255167.1|965147_965978_+	N-acetylmuramoyl-L-alanine amidase AmiD	NA	A0A1B0UZW5	Roseobacter_phage	30.0	5.7e-07
WP_001338420.1|965974_966988_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_001136559.1|967086_968517_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_000566372.1|968527_969529_-	low-specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_000815362.1|969565_971284_-	ubiquinone-dependent pyruvate dehydrogenase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.0	5.2e-31
WP_000178660.1|971416_972385_-	NADH oxidoreductase	NA	NA	NA	NA	NA
WP_000458809.1|972396_974049_-	hydroxylamine reductase	NA	NA	NA	NA	NA
WP_001338421.1|974192_975092_-	L-lysine exporter LysO	NA	NA	NA	NA	NA
WP_012135857.1|975586_976282_-	aquaporin Z	NA	NA	NA	NA	NA
WP_000599802.1|976706_978365_+	ATP-dependent endonuclease	NA	NA	NA	NA	NA
WP_001380339.1|978361_979318_-	DUF535 domain-containing protein	NA	NA	NA	NA	NA
WP_000746460.1|979468_980584_+	macrolide transporter subunit MacA	NA	NA	NA	NA	NA
WP_000188180.1|980580_982527_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.1	1.1e-37
WP_000410785.1|982599_982824_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	2.3e-16
WP_000520781.1|983146_983467_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	44.4	1.6e-13
WP_000934041.1|983497_985774_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.5	1.9e-166
>prophage 4
NC_009800	Escherichia coli HS, complete sequence	4643538	1665088	1682630	4643538	holin	Enterobacteria_phage(41.67%)	24	NA	NA
WP_000421825.1|1665088_1665628_-	DUF1441 family protein	NA	A5LH26	Enterobacteria_phage	100.0	1.8e-94
WP_000548593.1|1666178_1666385_-	hypothetical protein	NA	A0A0K2FJ18	Enterobacteria_phage	79.4	3.4e-22
WP_001019207.1|1666665_1666839_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA	NA
WP_001443523.1|1667011_1667167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071528545.1|1667314_1667503_-	cold-shock protein	NA	NA	NA	NA	NA
WP_000066495.1|1667513_1667726_-	cold shock protein CspI	NA	A0A1W6JNX5	Morganella_phage	74.3	1.2e-22
WP_001071782.1|1668089_1668587_-	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
WP_001101173.1|1668583_1669117_-	lysozyme	NA	K7PLY1	Enterobacteria_phage	93.8	1.4e-96
WP_001557934.1|1669230_1669491_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000189900.1|1669438_1669990_-	YdfR family protein	NA	Q08JA0	Stx2-converting_phage	51.1	1.0e-36
WP_000839588.1|1669994_1670210_-|holin	class II holin family protein	holin	A5LH82	Enterobacteria_phage	91.5	1.2e-30
WP_001146313.1|1670400_1671114_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000592549.1|1671520_1672480_-	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA	NA
WP_000780584.1|1672672_1673197_+	lipocalin family protein	NA	A0A1W6JNX6	Morganella_phage	52.9	1.0e-46
WP_001204787.1|1673352_1673730_-	antitermination protein	NA	Q777W5	Enterobacteria_phage	82.5	1.8e-53
WP_077625717.1|1673793_1673955_+	DUF1391 family protein	NA	NA	NA	NA	NA
WP_000344949.1|1673956_1674523_+	hypothetical protein	NA	A0A2L1IV26	Escherichia_phage	93.1	5.0e-07
WP_001295394.1|1676061_1677276_-	starvation-sensing protein RspA	NA	Q6A202	Oenococcus_phage	29.0	1.4e-46
WP_000598292.1|1677481_1677808_-	YnfA family protein	NA	A0A218MNG8	uncultured_virus	55.6	9.9e-24
WP_000705211.1|1677942_1678284_+	DUF1283 family protein	NA	NA	NA	NA	NA
WP_001138581.1|1678318_1678879_+	spermidine N1-acetyltransferase	NA	NA	NA	NA	NA
WP_077625725.1|1678881_1679592_-	YnfC family lipoprotein	NA	NA	NA	NA	NA
WP_001300836.1|1679699_1680005_+	DUF1161 domain-containing protein	NA	NA	NA	NA	NA
WP_000041697.1|1680203_1682630_+	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	49.2	1.7e-213
>prophage 5
NC_009800	Escherichia coli HS, complete sequence	4643538	2052897	2077686	4643538	tail,portal,plate,head,transposase	Shigella_phage(27.27%)	23	NA	NA
WP_148204713.1|2052897_2054044_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	92.6	2.3e-147
WP_000218214.1|2054934_2055786_+	protein deglycase HchA	NA	NA	NA	NA	NA
WP_000826746.1|2055893_2057252_-	two-component system sensor histidine kinase HprS	NA	Q8QKV7	Ectocarpus_siliculosus_virus	20.5	8.7e-05
WP_001339045.1|2057251_2057923_-	response regulator transcription factor HprR	NA	W8CYM9	Bacillus_phage	35.2	5.4e-32
WP_000920127.1|2058055_2058469_+	hydroxyisourate hydrolase	NA	NA	NA	NA	NA
WP_000740075.1|2058577_2059582_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
WP_001240105.1|2059582_2060218_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
WP_001007761.1|2060474_2061125_+	metal-binding protein ZinT	NA	NA	NA	NA	NA
WP_001079074.1|2061467_2061998_+	cytochrome b	NA	A0A0U2QLA7	Escherichia_phage	100.0	1.9e-56
WP_000098805.1|2062899_2063271_-	hypothetical protein	NA	K7PGV5	Enterobacterial_phage	52.9	1.9e-26
WP_001237226.1|2064811_2065612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001565623.1|2065621_2067616_-	hypothetical protein	NA	A0A286S1P0	Klebsiella_phage	27.2	2.4e-27
WP_000901073.1|2067980_2069072_+	acyltransferase	NA	NA	NA	NA	NA
WP_001310746.1|2069050_2069836_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000051917.1|2069862_2070537_-	YmfQ family protein	NA	NA	NA	NA	NA
WP_001116109.1|2070533_2071682_-|plate	baseplate J/gp47 family protein	plate	J9QE72	Clostridium_phage	29.8	2.4e-08
WP_001280393.1|2071671_2072121_-	phage GP46 family protein	NA	A0A0C4UR04	Shigella_phage	41.2	5.6e-17
WP_001075147.1|2072117_2072699_-|plate	phage baseplate assembly protein	plate	NA	NA	NA	NA
WP_000102291.1|2072695_2073781_-|tail	tail protein	tail	Q8SBG7	Shigella_phage	30.7	3.3e-39
WP_000371938.1|2074087_2074597_-|head	head decoration protein	head	NA	NA	NA	NA
WP_001085198.1|2074596_2075187_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001052908.1|2075188_2076055_-	S49 family peptidase	NA	A0A248XD65	Klebsiella_phage	48.6	1.8e-48
WP_001045358.1|2076051_2077686_-|portal	phage portal protein	portal	A0A291AUL8	Sinorhizobium_phage	34.9	7.5e-88
>prophage 6
NC_009800	Escherichia coli HS, complete sequence	4643538	2153606	2163268	4643538		Escherichia_phage(28.57%)	7	NA	NA
WP_000926394.1|2153606_2155022_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	30.9	4.0e-53
WP_000704908.1|2156839_2158006_-	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	55.0	1.4e-112
WP_001021402.1|2158186_2158741_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	57.6	1.5e-51
WP_000698224.1|2158755_2159646_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	33.6	2.1e-28
WP_000676429.1|2159677_2160547_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	66.7	9.8e-111
WP_000699389.1|2160573_2161638_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	55.0	5.8e-105
WP_000043540.1|2161861_2163268_-	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.9	1.6e-38
>prophage 7
NC_009800	Escherichia coli HS, complete sequence	4643538	2874510	2887693	4643538		Escherichia_phage(50.0%)	12	NA	NA
WP_001272928.1|2874510_2877072_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.6	3.0e-30
WP_001141320.1|2877177_2877834_+	protein-serine/threonine phosphatase	NA	A0A077SLQ6	Escherichia_phage	47.0	6.6e-51
WP_001295181.1|2877884_2878652_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.7	2.5e-70
WP_000847971.1|2878847_2879756_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.5	5.1e-118
WP_000590403.1|2879752_2881015_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	61.4	1.7e-135
WP_001278994.1|2881011_2881650_+	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	1.4e-82
WP_001136925.1|2881654_2882431_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_000104459.1|2882519_2883884_+	GntP family transporter	NA	NA	NA	NA	NA
WP_000081550.1|2883977_2884970_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	6.1e-32
WP_001272590.1|2885032_2886172_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	35.6	1.7e-06
WP_000254708.1|2886311_2886938_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.7	5.7e-36
WP_001295182.1|2886931_2887693_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	48.0	3.4e-59
