assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000019925.1_ASM1992v1	NC_010551	Burkholderia ambifaria MC40-6 chromosome 1, complete sequence	1	595251-595345	1	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,c2c9_V-U4,Cas14u_CAS-V,DinG	Orphan	CGCGTTGCCCGCGACCGCGCCGA	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,c2c9_V-U4,Cas14u_CAS-V,DinG,RT,cas14j,PD-DExK	NA|105aa|up_4|NC_010551.1_587827_588142_+,NA|240aa|up_0|NC_010551.1_594178_594898_-,NA|215aa|down_8|NC_010551.1_602748_603393_-	NA|579aa|up_9|NC_010551.1_582361_584098_+	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional	NA|201aa|up_8|NC_010551.1_584119_584722_+	PRK10739, PRK10739, YhgN family NAAT transporter	NA|184aa|up_7|NC_010551.1_584817_585369_-	PRK09162, PRK09162, hypoxanthine-guanine phosphoribosyltransferase; Provisional	NA|456aa|up_6|NC_010551.1_585463_586831_-	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|298aa|up_5|NC_010551.1_586920_587814_+	COG4137, COG4137, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|105aa|up_4|NC_010551.1_587827_588142_+	NA	NA|197aa|up_3|NC_010551.1_588138_588729_+	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|1000aa|up_2|NC_010551.1_589194_592194_+	PRK07207, PRK07207, ribonucleoside-diphosphate reductase subunit alpha	NA|404aa|up_1|NC_010551.1_592553_593765_+	PRK07209, PRK07209, ribonucleotide-diphosphate reductase subunit beta; Validated	NA|240aa|up_0|NC_010551.1_594178_594898_-	NA	NA|313aa|down_0|NC_010551.1_595581_596520_-	cd01942, ribokinase_group_A, Ribokinase-like subgroup A	NA|168aa|down_1|NC_010551.1_596613_597117_-	PRK00522, tpx, thiol peroxidase	NA|468aa|down_2|NC_010551.1_597189_598593_-	pfam11906, DUF3426, Protein of unknown function (DUF3426)	NA|301aa|down_3|NC_010551.1_598638_599541_-	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase	NA|456aa|down_4|NC_010551.1_599543_600911_-	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|159aa|down_5|NC_010551.1_600996_601473_-	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|151aa|down_6|NC_010551.1_601539_601992_-	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase	NA|185aa|down_7|NC_010551.1_602186_602741_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|215aa|down_8|NC_010551.1_602748_603393_-	NA	NA|462aa|down_9|NC_010551.1_603616_605002_+	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
GCF_000019925.1_ASM1992v1	NC_010551	Burkholderia ambifaria MC40-6 chromosome 1, complete sequence	2	1842393-1842503	2	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,c2c9_V-U4,Cas14u_CAS-V,DinG	Orphan	GGGGTTCAAGGAACGGTAAAGGAGGAACA	29	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,c2c9_V-U4,Cas14u_CAS-V,DinG,RT,cas14j,PD-DExK	NA,NA	NA|140aa|up_9|NC_010551.1_1833450_1833870_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|155aa|up_8|NC_010551.1_1834143_1834608_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|311aa|up_7|NC_010551.1_1834872_1835805_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|236aa|up_6|NC_010551.1_1835884_1836592_-	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|163aa|up_5|NC_010551.1_1837692_1838181_-	cd04332, YbaK_like, YbaK-like	NA|96aa|up_4|NC_010551.1_1838624_1838912_+	PRK12866, PRK12866, YciI-like protein; Reviewed	NA|326aa|up_3|NC_010551.1_1838921_1839899_-	cd12830, MtCorA-like, Mycobacterium tuberculosis CorA-like subfamily	NA|49aa|up_2|NC_010551.1_1840079_1840226_+	pfam08173, YbgT_YccB, Membrane bound YbgT-like protein	NA|206aa|up_1|NC_010551.1_1840222_1840840_+	pfam13671, AAA_33, AAA domain	NA|367aa|up_0|NC_010551.1_1840940_1842041_-	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|155aa|down_0|NC_010551.1_1842556_1843021_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|179aa|down_1|NC_010551.1_1843387_1843924_+	pfam07813, LTXXQ, LTXXQ motif family protein	NA|144aa|down_2|NC_010551.1_1844052_1844484_+	pfam14083, PGDYG, PGDYG protein	NA|121aa|down_3|NC_010551.1_1844532_1844895_-	pfam11226, DUF3022, Protein of unknown function (DUF3022)	NA|263aa|down_4|NC_010551.1_1844907_1845696_-	pfam10086, DUF2324, Putative membrane peptidase family (DUF2324)	NA|348aa|down_5|NC_010551.1_1845750_1846794_-	cd06283, PBP1_RegR_EndR_KdgR-like, ligand-binding domain of DNA transcription repressor RegR and other putative regulators such as KdgR and EndR	NA|322aa|down_6|NC_010551.1_1847116_1848082_-	PRK15409, PRK15409, glyoxylate/hydroxypyruvate reductase GhrB	NA|427aa|down_7|NC_010551.1_1848087_1849368_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|331aa|down_8|NC_010551.1_1849528_1850521_-	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)	NA|255aa|down_9|NC_010551.1_1850549_1851314_-	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel
GCF_000019925.1_ASM1992v1	NC_010551	Burkholderia ambifaria MC40-6 chromosome 1, complete sequence	3	2391838-2391909	3	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,c2c9_V-U4,Cas14u_CAS-V,DinG	Orphan	CCCATGCAAAGCTGTCGACCGGA	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,c2c9_V-U4,Cas14u_CAS-V,DinG,RT,cas14j,PD-DExK	NA|112aa|up_6|NC_010551.1_2379461_2379797_-,NA|216aa|up_1|NC_010551.1_2389907_2390555_+,NA	NA|263aa|up_9|NC_010551.1_2376565_2377354_-	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional	NA|324aa|up_8|NC_010551.1_2377518_2378490_+	cd19143, AKR_AKR6C1_2, AKR6C family of aldo-keto reductase (AKR)	NA|282aa|up_7|NC_010551.1_2378601_2379447_+	COG2961, ComJ, Protein involved in catabolism of external DNA [General function prediction only]	NA|112aa|up_6|NC_010551.1_2379461_2379797_-	NA	NA|135aa|up_5|NC_010551.1_2380306_2380711_-	cd01108, HTH_CueR, Helix-Turn-Helix DNA binding domain of CueR-like transcription regulators	NA|406aa|up_4|NC_010551.1_2386757_2387975_+	pfam11062, DUF2863, Protein of unknown function (DUF2863)	NA|277aa|up_3|NC_010551.1_2388190_2389021_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|225aa|up_2|NC_010551.1_2389096_2389771_+	COG3235, COG3235, Predicted membrane protein [Function unknown]	NA|216aa|up_1|NC_010551.1_2389907_2390555_+	NA	NA|385aa|up_0|NC_010551.1_2390633_2391788_-	cd06234, M14_PaCCP-like, Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases similar to Pseudomonas aerugnosa CCP (PaCCP)	NA|261aa|down_0|NC_010551.1_2391974_2392757_-	PRK02101, PRK02101, peroxide stress protein YaaA	NA|166aa|down_1|NC_010551.1_2392814_2393312_+	pfam13470, PIN_3, PIN domain	NA|391aa|down_2|NC_010551.1_2393343_2394516_+	PRK09082, PRK09082, methionine aminotransferase; Validated	NA|219aa|down_3|NC_010551.1_2394564_2395221_-	cd10424, GST_C_9, C-terminal, alpha helical domain of an unknown subfamily 9 of Glutathione S-transferases	NA|264aa|down_4|NC_010551.1_2395432_2396224_+	PRK07511, PRK07511, enoyl-CoA hydratase; Provisional	NA|231aa|down_5|NC_010551.1_2396396_2397089_+	PRK11752, PRK11752, putative S-transferase; Provisional	NA|159aa|down_6|NC_010551.1_2397139_2397616_-	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit	NA|154aa|down_7|NC_010551.1_2397612_2398074_-	cd03454, YdeM, YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function	NA|378aa|down_8|NC_010551.1_2398106_2399240_-	TIGR03203, pimD_small, pimeloyl-CoA dehydrogenase, small subunit	NA|399aa|down_9|NC_010551.1_2399259_2400456_-	TIGR03204, pimC_large, pimeloyl-CoA dehydrogenase, large subunit
GCF_000019925.1_ASM1992v1	NC_010551	Burkholderia ambifaria MC40-6 chromosome 1, complete sequence	4	2483005-2483114	4	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,c2c9_V-U4,Cas14u_CAS-V,DinG	Orphan	GCCGTTTCTGGCGACGCGGTAACGGCG	27	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,c2c9_V-U4,Cas14u_CAS-V,DinG,RT,cas14j,PD-DExK	NA,NA|65aa|down_6|NC_010551.1_2492687_2492882_-	NA|393aa|up_9|NC_010551.1_2471596_2472775_+	pfam15984, Collagen_mid, Bacterial collagen, middle region	NA|323aa|up_8|NC_010551.1_2473044_2474013_+	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional	NA|420aa|up_7|NC_010551.1_2474009_2475269_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|189aa|up_6|NC_010551.1_2475294_2475861_+	pfam13515, FUSC_2, Fusaric acid resistance protein-like	NA|127aa|up_5|NC_010551.1_2475914_2476295_-	COG5455, COG5455, Predicted integral membrane protein [Function unknown]	NA|584aa|up_4|NC_010551.1_2476391_2478143_-	TIGR02203, Lipid_A_export_ATP-binding/permease_protein_msbA	NA|251aa|up_3|NC_010551.1_2478366_2479119_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|281aa|up_2|NC_010551.1_2479263_2480106_+	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|427aa|up_1|NC_010551.1_2480242_2481523_+	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|393aa|up_0|NC_010551.1_2481696_2482875_-	COG0859, RfaF, ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]	NA|365aa|down_0|NC_010551.1_2483213_2484308_-	COG0859, RfaF, ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]	NA|1178aa|down_1|NC_010551.1_2484628_2488162_-	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated	NA|285aa|down_2|NC_010551.1_2488384_2489239_+	PRK05320, PRK05320, rhodanese superfamily protein; Provisional	NA|295aa|down_3|NC_010551.1_2489261_2490146_+	TIGR03838, queuosine_YadB, glutamyl-queuosine tRNA(Asp) synthetase	NA|512aa|down_4|NC_010551.1_2490224_2491760_-	PRK10590, PRK10590, ATP-dependent RNA helicase RhlE; Provisional	NA|128aa|down_5|NC_010551.1_2492205_2492589_-	pfam09864, MliC, Membrane-bound lysozyme-inhibitor of c-type lysozyme	NA|65aa|down_6|NC_010551.1_2492687_2492882_-	NA	NA|405aa|down_7|NC_010551.1_2492900_2494115_-	PRK09288, purT, formate-dependent phosphoribosylglycinamide formyltransferase	NA|182aa|down_8|NC_010551.1_2494331_2494877_+	pfam03724, META, META domain	NA|1611aa|down_9|NC_010551.1_2495056_2499889_+	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]
GCF_000019925.1_ASM1992v1	NC_010551	Burkholderia ambifaria MC40-6 chromosome 1, complete sequence	5	3095071-3095142	5	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,c2c9_V-U4,Cas14u_CAS-V,DinG	Orphan	GGTCCCATGCTTCGCGGTCGACC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,c2c9_V-U4,Cas14u_CAS-V,DinG,RT,cas14j,PD-DExK	NA|191aa|up_6|NC_010551.1_3086545_3087118_-,NA	NA|113aa|up_9|NC_010551.1_3083416_3083755_-	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]	NA|84aa|up_8|NC_010551.1_3084111_3084363_+	pfam04380, BMFP, Membrane fusogenic activity	NA|529aa|up_7|NC_010551.1_3084625_3086212_+	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|191aa|up_6|NC_010551.1_3086545_3087118_-	NA	NA|179aa|up_5|NC_010551.1_3087278_3087815_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|452aa|up_4|NC_010551.1_3087896_3089252_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|678aa|up_3|NC_010551.1_3089333_3091367_-	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]	NA|430aa|up_2|NC_010551.1_3091371_3092661_-	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed	NA|562aa|up_1|NC_010551.1_3093016_3094702_-	PRK09395, actP, cation/acetate symporter ActP	NA|102aa|up_0|NC_010551.1_3094718_3095024_-	pfam04341, DUF485, Protein of unknown function, DUF485	NA|402aa|down_0|NC_010551.1_3095264_3096470_-	pfam02515, CoA_transf_3, CoA-transferase family III	NA|382aa|down_1|NC_010551.1_3096500_3097646_-	TIGR03203, pimD_small, pimeloyl-CoA dehydrogenase, small subunit	NA|399aa|down_2|NC_010551.1_3097660_3098857_-	TIGR03204, pimC_large, pimeloyl-CoA dehydrogenase, large subunit	NA|712aa|down_3|NC_010551.1_3098886_3101022_-	PRK11154, fadJ, fatty acid oxidation complex subunit alpha FadJ	NA|321aa|down_4|NC_010551.1_3101250_3102213_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|627aa|down_5|NC_010551.1_3102283_3104164_+	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|331aa|down_6|NC_010551.1_3104441_3105434_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|252aa|down_7|NC_010551.1_3105426_3106182_-	PRK14343, PRK14343, lipoyl(octanoyl) transferase LipB	NA|109aa|down_8|NC_010551.1_3106265_3106592_-	pfam11142, DUF2917, Protein of unknown function (DUF2917)	NA|324aa|down_9|NC_010551.1_3106694_3107666_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional
GCF_000019925.1_ASM1992v1	NC_010551	Burkholderia ambifaria MC40-6 chromosome 1, complete sequence	6	3201282-3201388	6	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,c2c9_V-U4,Cas14u_CAS-V,DinG	Orphan	CTGAACGCGGGCAAGCGCTGACGCGG	26	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,c2c9_V-U4,Cas14u_CAS-V,DinG,RT,cas14j,PD-DExK	NA|162aa|up_0|NC_010551.1_3199440_3199926_-,NA|74aa|down_4|NC_010551.1_3206910_3207132_+	NA|311aa|up_9|NC_010551.1_3191170_3192103_+	PRK05692, PRK05692, hydroxymethylglutaryl-CoA lyase; Provisional	NA|169aa|up_8|NC_010551.1_3192124_3192631_+	cd04333, ProX_deacylase, This CD, composed mainly of bacterial single-domain proteins, includes the Thermus thermophilus (Tt) YbaK-like protein, a homolog of the trans-acting Escherichia coli YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium tumefaciens  ProX Ala-tRNA(Pro) deacylase and also the cis-acting prolyl-tRNA synthetase-editing domain (ProRS-INS)	NA|69aa|up_7|NC_010551.1_3192627_3192834_+	pfam06945, DUF1289, Protein of unknown function (DUF1289)	NA|301aa|up_6|NC_010551.1_3193063_3193966_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|164aa|up_5|NC_010551.1_3194079_3194571_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|299aa|up_4|NC_010551.1_3194603_3195500_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|320aa|up_3|NC_010551.1_3195779_3196739_+	COG2070, COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]	NA|321aa|up_2|NC_010551.1_3196862_3197825_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|359aa|up_1|NC_010551.1_3197996_3199073_-	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane	NA|162aa|up_0|NC_010551.1_3199440_3199926_-	NA	NA|613aa|down_0|NC_010551.1_3201585_3203424_+	cd01948, EAL, EAL domain	NA|340aa|down_1|NC_010551.1_3203601_3204621_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|427aa|down_2|NC_010551.1_3204617_3205898_+	COG2942, COG2942, N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism]	NA|303aa|down_3|NC_010551.1_3205894_3206803_+	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate	NA|74aa|down_4|NC_010551.1_3206910_3207132_+	NA	NA|65aa|down_5|NC_010551.1_3207209_3207404_-	pfam11146, DUF2905, Protein of unknown function (DUF2905)	NA|397aa|down_6|NC_010551.1_3207701_3208892_-	COG1565, COG1565, Uncharacterized conserved protein [Function unknown]	NA|248aa|down_7|NC_010551.1_3208905_3209649_+	PRK09134, PRK09134, SDR family oxidoreductase	NA|135aa|down_8|NC_010551.1_3209727_3210132_+	smart00905, FolB, Dihydroneopterin aldolase	NA|341aa|down_9|NC_010551.1_3210128_3211151_+	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
GCF_000019925.1_ASM1992v1	NC_010557	Burkholderia ambifaria MC40-6 chromosome 3, complete sequence	1	176537-176613	1	CRISPRCasFinder	no		cas14j,c2c9_V-U4,csa3,Cas14u_CAS-V	Orphan	GACACACGTCCGGCATCGGCCGC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,c2c9_V-U4,Cas14u_CAS-V,DinG,RT,cas14j,PD-DExK	NA|178aa|up_0|NC_010557.1_174497_175031_-,NA|102aa|down_2|NC_010557.1_179630_179936_-,NA|587aa|down_3|NC_010557.1_180169_181930_+,NA|73aa|down_7|NC_010557.1_185388_185607_-	NA|185aa|up_9|NC_010557.1_163062_163617_-	pfam08805, PilS, PilS N terminal	NA|359aa|up_8|NC_010557.1_163731_164808_-	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]	NA|595aa|up_7|NC_010557.1_164797_166582_-	COG2804, PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]	NA|197aa|up_6|NC_010557.1_166586_167177_-	TIGR03021, pilP_fam, type IV pilus biogenesis protein PilP	NA|439aa|up_5|NC_010557.1_167166_168483_-	pfam06864, PAP_PilO, Pilin accessory protein (PilO)	NA|578aa|up_4|NC_010557.1_168508_170242_-	TIGR02520, putative_Type_IV_pilus_protein, type IVB pilus formation outer membrane protein, R64 PilN family	NA|387aa|up_3|NC_010557.1_170241_171402_-	pfam10671, TcpQ, Toxin co-regulated pilus biosynthesis protein Q	NA|478aa|up_2|NC_010557.1_172201_173635_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|156aa|up_1|NC_010557.1_173809_174277_+	cd13400, LT_IagB-like, Escherichia coli invasion protein IagB and similar proteins	NA|178aa|up_0|NC_010557.1_174497_175031_-	NA	NA|272aa|down_0|NC_010557.1_178029_178845_+	pfam18013, Phage_lysozyme2, Phage tail lysozyme	NA|120aa|down_1|NC_010557.1_179251_179611_-	pfam09613, HrpB1_HrpK, Bacterial type III secretion protein (HrpB1_HrpK)	NA|102aa|down_2|NC_010557.1_179630_179936_-	NA	NA|587aa|down_3|NC_010557.1_180169_181930_+	NA	NA|285aa|down_4|NC_010557.1_182098_182953_+	COG0223, Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]	NA|377aa|down_5|NC_010557.1_183119_184250_-	PTZ00146, PTZ00146, fibrillarin; Provisional	NA|163aa|down_6|NC_010557.1_184402_184891_-	pfam09613, HrpB1_HrpK, Bacterial type III secretion protein (HrpB1_HrpK)	NA|73aa|down_7|NC_010557.1_185388_185607_-	NA	NA|324aa|down_8|NC_010557.1_185549_186521_-	cd06185, PDR_like, Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster	NA|466aa|down_9|NC_010557.1_186543_187941_-	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter
