assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000020045.1_ASM2004v1	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	1	1671623-1671767	1	PILER-CR	no		csa3	Orphan	TTGAGACAATAGAGTTTGACACAAAC	26	0	0	NA	NA	NA	2	2	Orphan	cas3,RT,DEDDh,csa3,DinG,WYL	NA,NA|412aa|down_0|NC_010625.1_1671856_1673092_-,NA|208aa|down_3|NC_010625.1_1675246_1675870_-,NA|322aa|down_6|NC_010625.1_1677604_1678570_-,NA|857aa|down_7|NC_010625.1_1678571_1681142_-	NA|375aa|up_9|NC_010625.1_1652757_1653882_-	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|1057aa|up_8|NC_010625.1_1655035_1658206_-	cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS)	NA|399aa|up_7|NC_010625.1_1658726_1659923_+	cd01830, XynE_like, SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE	NA|553aa|up_6|NC_010625.1_1660863_1662522_+	PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase FadD	NA|948aa|up_5|NC_010625.1_1662659_1665503_+	cd05931, FAAL, Fatty acyl-AMP ligase (FAAL)	NA|494aa|up_4|NC_010625.1_1666353_1667835_-	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|362aa|up_3|NC_010625.1_1667812_1668898_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|233aa|up_2|NC_010625.1_1668894_1669593_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|379aa|up_1|NC_010625.1_1669595_1670732_-	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|157aa|up_0|NC_010625.1_1670800_1671271_-	cd00293, USP_Like, Usp: Universal stress protein family	NA|412aa|down_0|NC_010625.1_1671856_1673092_-	NA	NA|362aa|down_1|NC_010625.1_1673088_1674174_-	TIGR03363, VI_chp_8, type VI secretion-associated protein, ImpA family	NA|359aa|down_2|NC_010625.1_1674170_1675247_-	pfam06996, T6SS_TssG, Type VI secretion, TssG	NA|208aa|down_3|NC_010625.1_1675246_1675870_-	NA	NA|430aa|down_4|NC_010625.1_1675943_1677233_-	PRK08126, PRK08126, hypothetical protein; Provisional	NA|93aa|down_5|NC_010625.1_1677229_1677508_-	cd14744, PAAR_CT_2, proline-alanine-alanine-arginine (PAAR) domain with uncharacterized C-terminal extension	NA|322aa|down_6|NC_010625.1_1677604_1678570_-	NA	NA|857aa|down_7|NC_010625.1_1678571_1681142_-	NA	NA|285aa|down_8|NC_010625.1_1681138_1681993_-	pfam13503, DUF4123, Domain of unknown function (DUF4123)	NA|847aa|down_9|NC_010625.1_1682000_1684541_-	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein
GCF_000020045.1_ASM2004v1	NC_010622	Paraburkholderia phymatum STM815 chromosome 1, complete sequence	1	638193-638298	1	CRISPRCasFinder	no		cas3,RT,DEDDh,csa3,DinG,WYL	Orphan	CGAAGCTGCTGCTGCCGGAGCTGCC	25	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,DEDDh,csa3,DinG,WYL	NA,NA	NA|249aa|up_9|NC_010622.1_624954_625701_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|282aa|up_8|NC_010622.1_625880_626726_+	cd19138, AKR_YeaE, Escherichia coli YeaE and similar proteins	NA|702aa|up_7|NC_010622.1_627421_629527_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|300aa|up_6|NC_010622.1_629523_630423_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|337aa|up_5|NC_010622.1_630419_631430_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|562aa|up_4|NC_010622.1_631459_633145_-	cd08503, PBP2_NikA_DppA_OppA_like_17, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|340aa|up_3|NC_010622.1_633403_634423_-	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism]	NA|162aa|up_2|NC_010622.1_634451_634937_-	cd02210, cupin_BLR2406-like, Bradyrhizobium japonicum BLR2406 and related proteins, cupin domain	NA|702aa|up_1|NC_010622.1_635153_637259_-	PRK00007, PRK00007, elongation factor G; Reviewed	NA|172aa|up_0|NC_010622.1_637526_638042_-	pfam02643, DUF192, Uncharacterized ACR, COG1430	NA|190aa|down_0|NC_010622.1_638814_639384_-	cd02566, PseudoU_synth_RluE, Pseudouridine synthase, Escherichia coli RluE	NA|419aa|down_1|NC_010622.1_639715_640972_+	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed	NA|69aa|down_2|NC_010622.1_642760_642967_-	COG1278, CspC, Cold shock proteins [Transcription]	NA|105aa|down_3|NC_010622.1_643499_643814_+	COG2127, COG2127, Uncharacterized conserved protein [Function unknown]	NA|767aa|down_4|NC_010622.1_643810_646111_+	TIGR02639, ATP-dependent_Clp_protease_subunit, ATP-dependent Clp protease ATP-binding subunit clpA	NA|149aa|down_5|NC_010622.1_646212_646659_-	PRK00601, dut, dUTP diphosphatase	NA|335aa|down_6|NC_010622.1_646723_647728_-	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|404aa|down_7|NC_010622.1_647801_649013_-	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|167aa|down_8|NC_010622.1_649162_649663_-	PRK00376, lspA, lipoprotein signal peptidase	NA|946aa|down_9|NC_010622.1_649662_652500_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed
GCF_000020045.1_ASM2004v1	NC_010622	Paraburkholderia phymatum STM815 chromosome 1, complete sequence	2	1535750-1535853	2	CRISPRCasFinder	no		cas3,RT,DEDDh,csa3,DinG,WYL	Orphan	GGCGGCAACCGCGAAGGCGGCTA	23	0	0	NA	NA	NA	2	2	Orphan	cas3,RT,DEDDh,csa3,DinG,WYL	NA,NA	NA|88aa|up_9|NC_010622.1_1524644_1524908_-	pfam11065, DUF2866, Protein of unknown function (DUF2866)	NA|459aa|up_8|NC_010622.1_1525047_1526424_-	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|357aa|up_7|NC_010622.1_1526498_1527569_-	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases	NA|436aa|up_6|NC_010622.1_1527788_1529096_+	PRK11195, PRK11195, lysophospholipid transporter LplT; Provisional	NA|269aa|up_5|NC_010622.1_1529175_1529982_+	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|339aa|up_4|NC_010622.1_1530010_1531027_-	pfam08907, DUF1853, Domain of unknown function (DUF1853)	NA|342aa|up_3|NC_010622.1_1531023_1532049_-	cd10030, UDG-F4_TTUDGA_SPO1dp_like, Uracil DNA glycosylase family 4, includes Thermotoga maritima TTUDGA, Bacillus phage SPO1 DNA polymerase, and similar proteins	NA|165aa|up_2|NC_010622.1_1532035_1532530_-	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|280aa|up_1|NC_010622.1_1532526_1533366_-	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|90aa|up_0|NC_010622.1_1533535_1533805_+	COG4281, ACB, Acyl-CoA-binding protein [Lipid metabolism]	NA|435aa|down_0|NC_010622.1_1536280_1537585_+	PRK15063, PRK15063, isocitrate lyase; Provisional	NA|145aa|down_1|NC_010622.1_1537708_1538143_-	pfam00582, Usp, Universal stress protein family	NA|301aa|down_2|NC_010622.1_1538380_1539283_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|263aa|down_3|NC_010622.1_1539437_1540226_+	TIGR01428, Haloacetate_dehalogenase, 2-haloalkanoic acid dehalogenase, type II	NA|531aa|down_4|NC_010622.1_1540299_1541892_+	PRK09255, PRK09255, malate synthase; Validated	NA|136aa|down_5|NC_010622.1_1542049_1542457_-	pfam06094, GGACT, Gamma-glutamyl cyclotransferase, AIG2-like	NA|165aa|down_6|NC_010622.1_1542509_1543004_-	PRK09372, PRK09372, ribonuclease E inhibitor RraA	NA|278aa|down_7|NC_010622.1_1543208_1544042_+	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|155aa|down_8|NC_010622.1_1544111_1544576_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|470aa|down_9|NC_010622.1_1545636_1547046_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed
