The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_010994	Rhizobium etli CIAT 652, complete genome	4513324	1568891	1578092	4513324		Enterobacteria_phage(28.57%)	9	NA	NA
WP_012483354.1|1568891_1570190_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	51.2	5.4e-97
WP_003547190.1|1570199_1570676_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_012483355.1|1570679_1572047_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	38.6	6.8e-34
WP_012483356.1|1572046_1572658_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	35.6	2.0e-17
WP_012483357.1|1572709_1573579_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	59.0	1.2e-95
WP_012483358.1|1573588_1574476_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_012483359.1|1574479_1575535_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	51.2	2.0e-94
WP_012483360.1|1575541_1576120_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.1	8.1e-37
WP_041683596.1|1576109_1578092_-	hypothetical protein	NA	F2Y0P4	Organic_Lake_phycodnavirus	36.4	8.8e-06
>prophage 2
NC_010994	Rhizobium etli CIAT 652, complete genome	4513324	1895003	1908107	4513324	tRNA	uncultured_Mediterranean_phage(90.0%)	12	NA	NA
WP_041683873.1|1895003_1896017_+	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	41.9	6.2e-24
WP_029531141.1|1896035_1896893_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	36.7	3.6e-33
WP_012483599.1|1896889_1897594_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	48.2	3.3e-40
WP_012483600.1|1897781_1897973_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	70.5	8.9e-09
WP_012483601.1|1898024_1898651_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_012483602.1|1898647_1899475_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	46.1	1.2e-52
WP_012483603.1|1899571_1900855_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.8	9.7e-99
WP_004678859.1|1900859_1901633_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	30.2	1.8e-23
WP_010025231.1|1901629_1902283_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	35.7	5.2e-16
WP_012483604.1|1902422_1904012_+	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV24	Clostridium_phage	30.0	5.0e-12
WP_012483605.1|1904097_1904970_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_012483607.1|1905566_1908107_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	50.2	9.7e-58
>prophage 3
NC_010994	Rhizobium etli CIAT 652, complete genome	4513324	2141365	2151628	4513324		uncultured_Mediterranean_phage(83.33%)	8	NA	NA
WP_012483791.1|2141365_2144287_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	62.2	0.0e+00
WP_004671899.1|2144569_2145085_+	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	72.9	1.2e-44
WP_012483792.1|2145186_2145834_-	MarC family protein	NA	NA	NA	NA	NA
WP_029531195.1|2146071_2148894_+	DNA gyrase subunit A	NA	A0A1B1IVS2	uncultured_Mediterranean_phage	42.6	8.8e-76
WP_012483796.1|2149593_2149872_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012483797.1|2149962_2150457_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	37.8	3.6e-25
WP_012483798.1|2150515_2151088_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	53.2	5.7e-43
WP_004671916.1|2151118_2151628_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	58.8	1.2e-44
>prophage 4
NC_010994	Rhizobium etli CIAT 652, complete genome	4513324	4044873	4054992	4513324		Mycobacterium_phage(28.57%)	9	NA	NA
WP_012485329.1|4044873_4045584_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2P1JXV3	Rhodococcus_phage	48.7	2.1e-50
WP_012485330.1|4045583_4045940_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_012485331.1|4045936_4046665_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	38.2	4.0e-41
WP_012485332.1|4046747_4047992_-	adenylate/guanylate cyclase domain-containing protein	NA	M1HLN3	Pelagibacter_phage	29.5	1.9e-14
WP_012485333.1|4048093_4049068_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	74.8	3.6e-138
WP_041683783.1|4049247_4051452_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	51.8	3.9e-212
WP_012485335.1|4051430_4051835_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA	NA
WP_010068756.1|4051851_4052073_-	glutaredoxin-like protein NrdH	NA	V5UN81	Mycobacterium_phage	52.1	1.8e-16
WP_012485336.1|4052748_4054992_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	37.2	5.1e-127

