The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_011059	Prosthecochloris aestuarii DSM 271, complete sequence	2512923	27053	83596	2512923	transposase,tRNA,protease	Mycobacterium_phage(40.0%)	48	NA	NA
WP_012504627.1|27053_28520_-|tRNA	glycine--tRNA ligase	tRNA	A0A2I2L3K8	Orpheovirus	27.8	9.3e-37
WP_012504628.1|28903_29377_+	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_012504629.1|29459_29696_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_150084432.1|29790_31158_+	cobyrinate a,c-diamide synthase	NA	NA	NA	NA	NA
WP_012504631.1|31554_31890_+	TusE/DsrC/DsvC family sulfur relay protein	NA	NA	NA	NA	NA
WP_012504632.1|31944_33198_+	dissimilatory-type sulfite reductase subunit alpha	NA	A0A060BKJ3	Podovirus	46.2	3.9e-108
WP_012504633.1|33270_34350_+	dissimilatory-type sulfite reductase subunit beta	NA	NA	NA	NA	NA
WP_012504634.1|34373_36110_+	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_012504635.1|36154_36526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012504636.1|36538_36898_+	sulfurtransferase complex subunit TusD	NA	NA	NA	NA	NA
WP_012504637.1|36902_37280_+	sulfurtransferase complex subunit TusC	NA	NA	NA	NA	NA
WP_012504638.1|37322_37616_+	sulfurtransferase complex subunit TusB	NA	NA	NA	NA	NA
WP_012504639.1|37659_38106_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012504640.1|38102_39098_+	menaquinol oxidoreductase	NA	NA	NA	NA	NA
WP_012504641.1|39100_40750_+	(Fe-S)-binding protein	NA	NA	NA	NA	NA
WP_114617896.1|40754_41129_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012504643.1|41125_41902_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_012504644.1|41911_43063_+	polysulfide reductase NrfD	NA	NA	NA	NA	NA
WP_012504645.1|43179_43629_+	bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase	NA	NA	NA	NA	NA
WP_012504646.1|43730_45119_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_012504647.1|45491_46079_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012504648.1|46211_49535_-	patatin-like protein	NA	NA	NA	NA	NA
WP_012504649.1|49763_51404_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012504650.1|51473_51779_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	NA	NA	NA	NA
WP_012504651.1|51860_52805_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_012504652.1|52932_53199_-	ATP synthase F1 subunit epsilon	NA	NA	NA	NA	NA
WP_012504653.1|53214_54603_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_012504654.1|54942_55479_+	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_012504655.1|55551_57420_+	phosphoenolpyruvate carboxykinase (GTP)	NA	NA	NA	NA	NA
WP_041702340.1|57709_59119_+	aromatic hydrocarbon degradation protein	NA	NA	NA	NA	NA
WP_012504657.1|59253_59466_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_012504658.1|59964_61512_+	polysulfide reductase NrfD	NA	NA	NA	NA	NA
WP_012504659.1|61524_64380_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_150084434.1|64495_65410_+	TSUP family transporter	NA	NA	NA	NA	NA
WP_012504661.1|65413_65833_+	DUF1634 domain-containing protein	NA	NA	NA	NA	NA
WP_012504662.1|66038_66551_+	NADH dehydrogenase	NA	NA	NA	NA	NA
WP_012504663.1|66922_68776_-	DNA helicase RecQ	NA	A0A1V0SGM9	Hokovirus	35.6	3.8e-88
WP_012504664.1|69350_70124_+	restriction endonuclease	NA	NA	NA	NA	NA
WP_012504668.1|71760_72810_+	FRG domain-containing protein	NA	NA	NA	NA	NA
WP_049753567.1|72886_73462_-|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	49.4	7.8e-40
WP_049753568.1|73489_74026_-	hypothetical protein	NA	A0A2P1JQX9	Mycobacterium_phage	38.5	1.3e-28
WP_012504669.1|74649_75186_+	SLATT domain-containing protein	NA	NA	NA	NA	NA
WP_012504670.1|75188_76901_+	RelA/SpoT domain-containing protein	NA	NA	NA	NA	NA
WP_150084260.1|78528_79598_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_012504674.1|80533_80935_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_012504675.1|80931_81225_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_012504677.1|81945_82173_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012504678.1|82312_83596_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NC_011059	Prosthecochloris aestuarii DSM 271, complete sequence	2512923	659192	687758	2512923	integrase,transposase,protease	Bacillus_virus(16.67%)	28	663151:663165	685872:685886
WP_012505208.1|659192_660512_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	52.7	1.9e-121
WP_012505209.1|660805_661990_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_041702177.1|661970_662429_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041702179.1|662435_662951_+	hypothetical protein	NA	NA	NA	NA	NA
663151:663165	attL	ACCAAAACAAATGGC	NA	NA	NA	NA
WP_012505211.1|663468_664488_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_012505212.1|664492_666016_+	nucleotide-binding protein	NA	NA	NA	NA	NA
WP_012505213.1|666019_666760_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.8	1.7e-15
WP_012505214.1|666743_667517_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_012505215.1|667513_668338_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_012505216.1|668552_668903_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_041702421.1|669006_669657_+	AAA family ATPase	NA	K7R2R7	Vibrio_phage	30.6	1.1e-16
WP_012505218.1|669653_669920_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012505219.1|669916_670357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012505220.1|670344_671007_+	conjugal transfer protein TraF	NA	NA	NA	NA	NA
WP_012505221.1|670903_672139_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	30.9	2.9e-31
WP_153304034.1|672576_672819_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012505223.1|672972_674904_+	relaxase/mobilization nuclease and DUF3363 domain-containing protein	NA	NA	NA	NA	NA
WP_012505225.1|677700_678336_+	HIT domain-containing protein	NA	NA	NA	NA	NA
WP_012505226.1|678335_678902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012505227.1|678898_679657_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150084293.1|679604_679991_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012505229.1|680181_681297_+	thiamine-monophosphate kinase	NA	NA	NA	NA	NA
WP_012505230.1|681256_681751_+	dUTP pyrophosphatase	NA	A0A0K2FMI0	Brevibacillus_phage	49.1	8.5e-35
WP_150084295.1|681808_682195_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_012505233.1|684169_684949_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_012505234.1|684978_685464_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_041702189.1|685848_686136_+	lipoprotein	NA	NA	NA	NA	NA
685872:685886	attR	GCCATTTGTTTTGGT	NA	NA	NA	NA
WP_012505237.1|686774_687758_-|transposase	IS3 family transposase	transposase	A0A2P1JR32	Mycobacterium_phage	30.1	7.9e-08
>prophage 3
NC_011059	Prosthecochloris aestuarii DSM 271, complete sequence	2512923	2274015	2328418	2512923	integrase,transposase,tRNA	Streptococcus_phage(25.0%)	57	2294501:2294517	2334053:2334069
WP_012506633.1|2274015_2275053_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	41.9	1.8e-63
WP_012506635.1|2276124_2276385_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5SCV8	Streptococcus_phage	42.5	2.1e-13
WP_041702602.1|2276368_2276593_-	TraY domain-containing protein	NA	NA	NA	NA	NA
WP_150084410.1|2277033_2278599_+	Fic family protein	NA	NA	NA	NA	NA
WP_012506638.1|2279141_2280125_+|transposase	IS3 family transposase	transposase	A0A2P1JR32	Mycobacterium_phage	29.6	3.9e-07
WP_012506640.1|2280457_2281162_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012506641.1|2281175_2283197_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167317497.1|2283233_2284874_-	radical SAM protein	NA	NA	NA	NA	NA
WP_081429342.1|2285204_2285663_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_012506644.1|2285751_2286993_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	30.7	1.4e-30
WP_150084412.1|2286995_2287364_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081429344.1|2287484_2287847_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_012506645.1|2287901_2288192_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_012506646.1|2288578_2290645_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_012506647.1|2290758_2291403_+	Mrr restriction system protein	NA	NA	NA	NA	NA
WP_012506648.1|2291607_2292180_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	51.6	1.9e-33
WP_012506649.1|2292262_2292616_+	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_012506650.1|2292625_2293741_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.7	2.4e-53
2294501:2294517	attL	GGCTTGACGAAGCGCTT	NA	NA	NA	NA
WP_012506651.1|2294985_2295642_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_012506652.1|2295648_2297076_+	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA	NA
WP_012506653.1|2297180_2297606_+	cytochrome c5 family protein	NA	NA	NA	NA	NA
WP_012506654.1|2297803_2298175_+	cytochrome c5 family protein	NA	NA	NA	NA	NA
WP_012506655.1|2298436_2298691_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012506656.1|2298769_2299570_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	35.7	1.8e-34
WP_012506657.1|2299587_2300898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012506658.1|2300860_2301253_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_012506659.1|2301255_2301513_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_012506660.1|2301505_2302732_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_012506661.1|2302728_2303673_-	bifunctional molybdenum cofactor biosynthesis protein MoaC/MoaB	NA	NA	NA	NA	NA
WP_012506662.1|2303804_2304815_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_012506663.1|2304861_2305719_-	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA	NA
WP_012506664.1|2305767_2306283_-	RsbRD N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_012506665.1|2306404_2306725_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012506666.1|2306966_2307155_+	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA	NA
WP_150084414.1|2307324_2308488_+	bifunctional molybdenum cofactor guanylyltransferase MobA/molybdopterin-guanine dinucleotide biosynthesis adaptor protein MobB	NA	NA	NA	NA	NA
WP_012506668.1|2308465_2308981_+	universal stress protein	NA	NA	NA	NA	NA
WP_012506669.1|2309065_2310295_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit F	NA	NA	NA	NA	NA
WP_012506670.1|2310310_2310937_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit E	NA	NA	NA	NA	NA
WP_012506671.1|2310938_2311568_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit D	NA	NA	NA	NA	NA
WP_012506672.1|2311583_2312219_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit C	NA	NA	NA	NA	NA
WP_012506673.1|2312205_2313360_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit B	NA	NA	NA	NA	NA
WP_012506674.1|2313363_2314710_-	Na(+)-translocating NADH-quinone reductase subunit A	NA	NA	NA	NA	NA
WP_012506675.1|2315434_2317654_+	molybdopterin-dependent oxidoreductase	NA	A0A077SK27	Escherichia_phage	27.4	3.3e-46
WP_012506676.1|2317657_2318224_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_012506677.1|2318226_2319219_+	polysulfide reductase NrfD	NA	NA	NA	NA	NA
WP_167317498.1|2319293_2319455_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012506678.1|2319579_2320266_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_153304038.1|2320459_2320630_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041702323.1|2320652_2320868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081429346.1|2321245_2321533_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_012506679.1|2321454_2321697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012506680.1|2321856_2322387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012506681.1|2322484_2323582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150084549.1|2323571_2324066_+	threonine transporter	NA	NA	NA	NA	NA
WP_012506683.1|2324062_2325889_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012506684.1|2325977_2326868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012504678.1|2327134_2328418_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
2334053:2334069	attR	GGCTTGACGAAGCGCTT	NA	NA	NA	NA
>prophage 4
NC_011059	Prosthecochloris aestuarii DSM 271, complete sequence	2512923	2456558	2493804	2512923	integrase,transposase,protease	Leptospira_phage(28.57%)	30	2452652:2452667	2496799:2496814
2452652:2452667	attL	GCACAATAGCCTGCTC	NA	NA	NA	NA
WP_012506808.1|2456558_2457410_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_012506809.1|2457443_2457899_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_012506810.1|2458204_2458672_+	periplasmic heavy metal sensor	NA	NA	NA	NA	NA
WP_012506811.1|2459097_2460297_-	S8 family serine peptidase	NA	NA	NA	NA	NA
WP_041702330.1|2460296_2461175_-	M24 family metallopeptidase	NA	NA	NA	NA	NA
WP_012506813.1|2461164_2462466_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_012506814.1|2462480_2463902_-	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA	NA
WP_012506815.1|2463946_2465281_-	radical SAM protein	NA	NA	NA	NA	NA
WP_012506816.1|2465352_2465694_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012506818.1|2466256_2467249_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_012506819.1|2467477_2468452_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012506820.1|2468512_2468893_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041702333.1|2469157_2469376_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012506822.1|2469540_2469978_+	thiol-disulfide oxidoreductase DCC family protein	NA	NA	NA	NA	NA
WP_041702334.1|2470167_2472264_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_012506824.1|2472429_2472801_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_012506825.1|2473250_2474030_+	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_012504678.1|2474590_2475874_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_012506826.1|2476013_2476166_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012506827.1|2476378_2477464_+	Fic family protein	NA	D7RWK9	Brochothrix_phage	29.9	5.6e-23
WP_012506828.1|2477892_2478045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012506829.1|2478074_2481503_-	TIR domain-containing protein	NA	NA	NA	NA	NA
WP_150084424.1|2481622_2482087_-	DUF4231 domain-containing protein	NA	A0A2H4JD89	uncultured_Caudovirales_phage	39.7	9.8e-17
WP_150084426.1|2485184_2486292_+|transposase	IS3-like element ISPae1 family transposase	transposase	S5WIU1	Leptospira_phage	44.1	5.3e-53
WP_012506835.1|2486337_2486586_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_150084428.1|2486778_2487886_+|transposase	IS3-like element ISPae1 family transposase	transposase	S5WIU1	Leptospira_phage	44.1	5.3e-53
WP_012506837.1|2488074_2491029_-	ATP-dependent helicase	NA	A7KV33	Bacillus_phage	24.9	3.2e-36
WP_012506838.1|2491043_2492066_-	DNA cytosine methyltransferase	NA	A0A0R6PG08	Moraxella_phage	34.0	7.6e-46
WP_012506839.1|2492391_2493072_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081429348.1|2493273_2493804_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	53.9	1.3e-28
2496799:2496814	attR	GCACAATAGCCTGCTC	NA	NA	NA	NA
>prophage 1
NC_011061	Prosthecochloris aestuarii DSM 271 plasmid pPAES01, complete sequence	66772	41348	49979	66772		Microcystis_virus(33.33%)	9	NA	NA
WP_012509578.1|41348_43652_-	hypothetical protein	NA	A0A1L2BY82	Clostridium_phage	27.9	1.1e-65
WP_012509580.1|44167_44959_-	formylglycine-generating enzyme family protein	NA	A0A7F1	Microcystis_virus	51.6	1.7e-45
WP_012509581.1|45120_45417_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012509582.1|45727_46741_-	RNA-directed DNA polymerase	NA	A0A0N7AE80	Bacillus_phage	37.7	2.0e-62
WP_150084581.1|46737_47094_-	diversity-generating retroelement protein Avd	NA	A0A0N7ACE0	Bacillus_phage	31.4	2.6e-09
WP_012509584.1|47071_47551_-	HRDC domain-containing protein	NA	NA	NA	NA	NA
WP_150084583.1|47800_48607_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A7F1	Microcystis_virus	42.1	1.0e-29
WP_081429357.1|48895_49270_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012509586.1|49385_49979_-	recombinase family protein	NA	E5FFF9	Burkholderia_phage	48.9	6.4e-37
