The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_011149	Salmonella enterica subsp. enterica serovar Agona str. SL483, complete sequence	4798660	932632	941980	4798660	protease,integrase	Dickeya_phage(16.67%)	8	933883:933897	947544:947558
WP_001201750.1|932632_933751_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
WP_000125885.1|933747_935694_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	41.9	2.0e-39
933883:933897	attL	GGAAAATCAACGCTG	NA	NA	NA	NA
WP_000447499.1|935823_936045_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000520789.1|936368_936689_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
WP_000934057.1|936719_938996_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	1.1e-164
WP_001747668.1|939492_939969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001117984.1|941243_941441_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001747671.1|941602_941980_-|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	40.2	1.0e-19
947544:947558	attR	CAGCGTTGATTTTCC	NA	NA	NA	NA
>prophage 2
NC_011149	Salmonella enterica subsp. enterica serovar Agona str. SL483, complete sequence	4798660	1086219	1123455	4798660	transposase,plate	Enterobacteria_phage(20.0%)	28	NA	NA
WP_100148601.1|1086219_1087475_-|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	33.9	2.4e-17
WP_000623370.1|1087755_1088214_-	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_001227394.1|1088337_1088709_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001022123.1|1088717_1089158_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000928422.1|1089177_1089690_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001216386.1|1089730_1090177_-	DUF1240 domain-containing protein	NA	NA	NA	NA	NA
WP_153274191.1|1090218_1090458_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001139255.1|1092621_1093464_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000002328.1|1093487_1093967_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_000076070.1|1093985_1095347_-	ImpA family type VI secretion system protein	NA	NA	NA	NA	NA
WP_001137105.1|1095357_1098819_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_000365805.1|1098897_1100310_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_000089147.1|1100311_1101049_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
WP_000614296.1|1101045_1103781_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	31.5	2.9e-84
WP_000343978.1|1103793_1104552_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_000246455.1|1104556_1105888_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_130549539.1|1105890_1106394_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_000796942.1|1106420_1107707_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_000509052.1|1107731_1108820_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_000393863.1|1108783_1110637_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_000611701.1|1110641_1111058_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_000058004.1|1111054_1112527_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_000031252.1|1112817_1113321_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_001142966.1|1113949_1114468_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_000103453.1|1114690_1116832_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	25.4	2.9e-23
WP_000014621.1|1116900_1121067_+	RHS repeat protein	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	40.6	1.4e-21
WP_000739389.1|1121134_1122100_+	Sel1 repeat protein	NA	NA	NA	NA	NA
WP_109188131.1|1122293_1123455_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	40.8	1.2e-47
>prophage 3
NC_011149	Salmonella enterica subsp. enterica serovar Agona str. SL483, complete sequence	4798660	2128790	2139297	4798660		Enterobacteria_phage(37.5%)	10	NA	NA
WP_000126349.1|2128790_2130104_-	lipopolysaccharide biosynthesis protein RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
WP_000565903.1|2130130_2131210_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.5	1.7e-16
WP_000648785.1|2131214_2131988_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000018219.1|2132003_2132978_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_000973710.1|2132983_2133535_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.6	1.3e-52
WP_000857531.1|2133535_2134414_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	65.5	2.1e-108
WP_001023665.1|2134461_2135361_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	1.1e-29
WP_000697849.1|2135360_2136446_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.6	1.0e-101
WP_000981469.1|2136822_2137716_-	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_001111843.1|2137893_2139297_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	3.1e-21
>prophage 4
NC_011149	Salmonella enterica subsp. enterica serovar Agona str. SL483, complete sequence	4798660	2215327	2224498	4798660	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000195330.1|2215327_2217361_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
WP_000703143.1|2217601_2218060_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	71.9	2.4e-52
WP_001197951.1|2218231_2218762_+	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000950413.1|2218818_2219286_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
WP_000598637.1|2219332_2220052_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000272851.1|2220048_2221734_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	6.2e-279
WP_001240418.1|2221956_2222688_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
WP_001261696.1|2222747_2222855_+	protein YohO	NA	NA	NA	NA	NA
WP_000824850.1|2222835_2223567_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569166.1|2223550_2224498_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
>prophage 5
NC_011149	Salmonella enterica subsp. enterica serovar Agona str. SL483, complete sequence	4798660	2675745	2821745	4798660	terminase,tRNA,head,holin,tail,portal,integrase,capsid,plate	Salmonella_phage(45.88%)	145	2733414:2733430	2827734:2827750
WP_001134564.1|2675745_2676297_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
WP_000253558.1|2676321_2676957_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA	NA
WP_000361660.1|2676960_2678322_-	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_001048541.1|2678332_2679226_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA	NA
WP_000995695.1|2679341_2680190_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000684021.1|2680228_2681146_-	oxidoreductase	NA	NA	NA	NA	NA
WP_001276364.1|2681167_2682364_-	OFA family MFS transporter	NA	NA	NA	NA	NA
WP_001022463.1|2682479_2683406_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	24.4	3.0e-09
WP_001196291.1|2683443_2683704_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.5	4.9e-18
WP_000986043.1|2683815_2684196_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_000818962.1|2684195_2684927_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_000399380.1|2684938_2685667_-	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_000102230.1|2685678_2686584_-	GTPase Era	NA	NA	NA	NA	NA
WP_001068341.1|2686580_2687261_-	ribonuclease III	NA	A0A2K9L5P0	Tupanvirus	31.8	7.4e-21
WP_000002559.1|2687534_2688509_-	signal peptidase I	NA	NA	NA	NA	NA
WP_000790154.1|2688525_2690325_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.9	7.2e-23
WP_000589087.1|2690575_2691055_-	SoxR-reducing system protein RseC	NA	NA	NA	NA	NA
WP_000812021.1|2691051_2692008_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA	NA
WP_001168374.1|2692007_2692658_-	anti-sigma-E factor RseA	NA	NA	NA	NA	NA
WP_000003307.1|2692689_2693265_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA	NA
WP_014344135.1|2693261_2693426_-	rpoE leader peptide RseD	NA	NA	NA	NA	NA
WP_000989185.1|2693689_2695312_+	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_000083343.1|2695296_2696034_-|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	tRNA	NA	NA	NA	NA
WP_000219174.1|2696164_2697499_+	ATP-dependent RNA helicase SrmB	NA	A0A1B1IS59	uncultured_Mediterranean_phage	29.7	1.6e-43
WP_001747585.1|2697516_2698416_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000188414.1|2698518_2699106_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA	NA
WP_000627811.1|2699167_2699551_-	autonomous glycyl radical cofactor GrcA	NA	Q7Y524	Enterobacteria_phage	74.0	6.1e-33
WP_000179975.1|2699869_2700559_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	50.0	2.1e-55
WP_000997368.1|2700674_2701712_-|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
WP_001098732.1|2701915_2702335_+	thioredoxin TrxC	NA	A0A0K2FIM3	Achromobacter_phage	40.6	1.2e-16
WP_000183644.1|2702407_2703088_+|tRNA	tRNA-uridine aminocarboxypropyltransferase	tRNA	NA	NA	NA	NA
WP_000082651.1|2703141_2705802_+	protein lysine acetyltransferase	NA	NA	NA	NA	NA
WP_000949286.1|2705916_2707272_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001264468.1|2707314_2707638_+	YfiM family lipoprotein	NA	NA	NA	NA	NA
WP_000807814.1|2707634_2708936_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	30.1	3.4e-43
WP_000985658.1|2709039_2709495_-	DUF4385 domain-containing protein	NA	E3SMI8	Prochlorococcus_phage	49.3	8.6e-34
WP_001235092.1|2715550_2718124_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.5	2.6e-127
WP_000992634.1|2718253_2718985_-	polyphenol oxidase	NA	NA	NA	NA	NA
WP_000079130.1|2718981_2719962_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
WP_000197660.1|2720093_2720831_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_000178449.1|2721102_2721441_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_001156921.1|2721598_2721985_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000777801.1|2722120_2723593_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_000977529.1|2724710_2726414_-	hypothetical protein	NA	F1BUJ7	Cronobacter_phage	81.3	1.7e-223
WP_000200791.1|2726413_2726959_-	hypothetical protein	NA	F1BUJ9	Cronobacter_phage	71.4	3.5e-58
WP_000267954.1|2726930_2727656_-	hypothetical protein	NA	F1BUK1	Cronobacter_phage	56.4	3.8e-68
WP_001215677.1|2727645_2728176_-|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	32.4	4.4e-13
WP_000084303.1|2728178_2730191_-|tail	phage tail protein	tail	F1BUK3	Cronobacter_phage	81.2	2.1e-148
WP_001001824.1|2730200_2730788_-	hypothetical protein	NA	F1BUK5	Cronobacter_phage	82.1	1.1e-89
WP_000136927.1|2730780_2731965_-|plate	baseplate J/gp47 family protein	plate	F1BUK6	Cronobacter_phage	78.6	5.1e-179
WP_001002797.1|2731961_2732291_-	DUF2590 family protein	NA	F1BUK8	Cronobacter_phage	72.4	3.8e-39
WP_000811100.1|2732287_2734255_-|tail	phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	70.7	1.9e-271
2733414:2733430	attL	GCATCCAGCTCCGCCTG	NA	NA	NA	NA
WP_000411500.1|2734442_2734700_-|tail	putative phage tail assembly chaperone	tail	A5X9I7	Aeromonas_virus	61.0	2.3e-20
WP_000376378.1|2734846_2735179_-	hypothetical protein	NA	F1BUL2	Cronobacter_phage	70.0	4.4e-35
WP_000175558.1|2735178_2735520_-	M15 family metallopeptidase	NA	F1BUL3	Cronobacter_phage	91.1	2.2e-50
WP_001154426.1|2735516_2735813_-|holin	phage holin family protein	holin	C7BGD7	Burkholderia_phage	48.2	2.4e-16
WP_000166745.1|2735825_2736281_-	DUF2597 family protein	NA	F1BUL4	Cronobacter_phage	71.5	1.7e-58
WP_000220184.1|2736277_2737405_-	DUF2586 family protein	NA	F1BUL5	Cronobacter_phage	82.9	8.1e-174
WP_000606933.1|2737401_2738106_-	hypothetical protein	NA	F1BUL6	Cronobacter_phage	59.5	4.0e-70
WP_000080871.1|2738102_2738585_-|tail	phage tail protein	tail	F1BUL7	Cronobacter_phage	48.7	2.3e-37
WP_000491223.1|2738581_2739034_-|head	head completion/stabilization protein	head	F1BUL8	Cronobacter_phage	64.7	1.2e-48
WP_001177276.1|2739132_2739831_-|terminase	terminase	terminase	F1BUM0	Cronobacter_phage	52.6	3.6e-63
WP_001176503.1|2739842_2740871_-|capsid	phage major capsid protein, P2 family	capsid	F1BUM2	Cronobacter_phage	71.6	3.7e-133
WP_023375469.1|2740905_2741742_-|capsid	capsid scaffolding protein	capsid	F1BUM4	Cronobacter_phage	52.3	3.6e-46
WP_001151938.1|2741952_2743737_+	hypothetical protein	NA	F1BUM5	Cronobacter_phage	69.7	1.8e-247
WP_000746494.1|2743733_2744753_+|portal	phage portal protein	portal	F1BUM7	Cronobacter_phage	68.5	1.3e-135
WP_001264830.1|2744806_2745076_+	ogr/Delta-like zinc finger family protein	NA	F1BUM8	Cronobacter_phage	78.4	5.1e-34
WP_000994501.1|2745103_2747761_-	toprim domain-containing protein	NA	A0A077K8T2	Ralstonia_phage	47.5	1.2e-244
WP_000922120.1|2747799_2748018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000681787.1|2748020_2748590_-	3'-5' exoribonuclease	NA	K7PLW7	Enterobacteria_phage	46.3	2.6e-43
WP_000645096.1|2748599_2748932_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000661531.1|2748957_2749296_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000185337.1|2749393_2749699_+	helix-turn-helix transcriptional regulator	NA	A0A0M5M1I9	Salmonella_phage	47.5	1.6e-15
WP_024132356.1|2749765_2750758_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0F7LBR0	Escherichia_phage	58.2	1.4e-108
WP_010989056.1|2750921_2750969_+	pheA operon leader peptide PheL	NA	NA	NA	NA	NA
WP_000200080.1|2751068_2752229_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
WP_000210991.1|2752189_2753098_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_000225191.1|2753155_2754277_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_001168062.1|2754286_2755357_-	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.8	2.4e-90
WP_001212379.1|2755796_2756315_+	YfiR family protein	NA	NA	NA	NA	NA
WP_001030981.1|2756307_2757528_+	diguanylate cyclase DgcN	NA	A0A2K8I9Y5	Pseudomonas_phage	36.2	5.8e-08
WP_000065257.1|2757684_2758032_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_000469804.1|2758072_2758840_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_000043266.1|2758884_2759433_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000256453.1|2759451_2759700_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_000460052.1|2759952_2761314_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_001537507.1|2761479_2762271_+	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_127172650.1|2762290_2763577_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_001294018.1|2763697_2764303_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001518875.1|2764337_2764928_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_001059155.1|2765051_2765930_+	NAD(+) kinase	NA	NA	NA	NA	NA
WP_000880958.1|2766015_2767677_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001203445.1|2767825_2768164_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_001112990.1|2768329_2768620_-	RnfH family protein	NA	NA	NA	NA	NA
WP_000242603.1|2768609_2769086_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_001518569.1|2769235_2769718_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
WP_001237691.1|2770332_2781807_+	biofilm-associated protein BapA	NA	NA	NA	NA	NA
WP_000533865.1|2781871_2783281_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_000196133.1|2783277_2785458_+	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	1.3e-18
WP_072101449.1|2785465_2786629_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_000980498.1|2787180_2787399_-	ogr/Delta-like zinc finger family protein	NA	Q53ZE7	Salmonella_virus	100.0	2.1e-38
WP_001102264.1|2787467_2788568_-	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	95.4	3.4e-193
WP_000980408.1|2788564_2789050_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	99.2	1.3e-67
WP_001282774.1|2789046_2791854_-|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	99.4	0.0e+00
WP_000763316.1|2791846_2791966_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	100.0	1.8e-15
WP_001280962.1|2791980_2792283_-|tail	phage tail assembly protein	tail	A0A1S6KZZ9	Salmonella_phage	100.0	2.5e-45
WP_001207647.1|2792337_2792853_-|tail	phage major tail tube protein	tail	A0A1S6L002	Salmonella_phage	100.0	9.3e-93
WP_000046109.1|2792862_2794035_-|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	99.7	5.7e-223
WP_000680168.1|2794165_2794693_-|tail	tail fiber assembly protein	tail	NA	NA	NA	NA
WP_001274653.1|2794695_2796462_-|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	52.3	4.7e-136
WP_001086806.1|2796458_2797064_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	98.5	8.3e-117
WP_000268275.1|2797056_2797965_-|plate	baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	98.3	3.2e-157
WP_000177401.1|2797951_2798311_-	GPW/gp25 family protein	NA	A0A1S6KZZ4	Salmonella_phage	98.3	1.4e-58
WP_000993746.1|2798307_2798886_-|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	99.0	8.8e-108
WP_001099507.1|2798965_2800411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000343945.1|2800422_2800872_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	89.1	2.5e-65
WP_001039963.1|2800864_2801296_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	98.6	5.6e-75
WP_024132357.1|2801391_2801820_-	hypothetical protein	NA	A0A1S6KZX8	Salmonella_phage	98.6	8.6e-68
WP_000731036.1|2801816_2802194_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	100.0	8.1e-62
WP_001069919.1|2802198_2802708_-	lysozyme	NA	A0A1S6KZY9	Salmonella_phage	98.8	2.2e-94
WP_000171565.1|2802688_2802904_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	100.0	5.9e-33
WP_000868193.1|2802907_2803111_-|tail	tail protein X	tail	E5G6M9	Salmonella_phage	98.5	1.9e-33
WP_000673523.1|2803110_2803575_-|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.6	6.4e-77
WP_000059168.1|2803668_2804319_-|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	99.5	2.4e-114
WP_000730758.1|2804322_2805384_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	99.7	6.0e-195
WP_000216226.1|2805400_2806234_-|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	84.5	1.3e-120
WP_001098457.1|2806376_2808143_+|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	98.0	0.0e+00
WP_000520367.1|2808142_2809171_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	92.9	4.9e-178
WP_000059520.1|2809217_2810882_-	hypothetical protein	NA	X2KLG0	Campylobacter_phage	24.9	4.5e-11
WP_000698373.1|2811120_2811498_-	ASCH domain-containing protein	NA	Q6SE87	Lactobacillus_prophage	50.0	3.4e-28
WP_014344394.1|2811475_2812585_-	hypothetical protein	NA	Q6SE88	Lactobacillus_prophage	38.9	2.9e-67
WP_001217560.1|2812690_2812924_-	DinI family protein	NA	A0A1S6L014	Salmonella_phage	89.6	1.2e-31
WP_001154443.1|2812935_2813124_-	hypothetical protein	NA	A0A1S6L006	Salmonella_phage	98.4	6.1e-26
WP_000301162.1|2813447_2815691_-	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	96.1	0.0e+00
WP_000104120.1|2815681_2816539_-	DNA adenine methylase	NA	A0A1S6L011	Salmonella_phage	80.4	2.7e-129
WP_000785509.1|2816535_2816763_-	TraR/DksA family transcriptional regulator	NA	A0A1S6L007	Salmonella_phage	93.3	1.3e-35
WP_001244234.1|2816762_2816996_-	DUF2732 domain-containing protein	NA	A0A1S6L021	Salmonella_phage	84.4	2.0e-26
WP_000963195.1|2817063_2817405_-	DUF5347 domain-containing protein	NA	E5G6L5	Salmonella_phage	85.0	4.2e-49
WP_000166366.1|2817624_2818083_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000957776.1|2818030_2818264_-	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	59.1	4.7e-12
WP_000460862.1|2818271_2818781_-	phage regulatory CII family protein	NA	A0A1S6L008	Salmonella_phage	92.9	5.1e-83
WP_000102104.1|2818816_2819056_-	hypothetical protein	NA	A0A1S6KZZ6	Salmonella_phage	98.7	8.8e-38
WP_000052560.1|2819172_2819805_+	helix-turn-helix domain-containing protein	NA	A0A1S6KZZ7	Salmonella_phage	58.6	1.4e-66
WP_001536726.1|2819808_2820834_+|integrase	site-specific integrase	integrase	A0A1S6L016	Salmonella_phage	100.0	9.9e-203
WP_001650427.1|2821163_2821745_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A1B5FPC6	Escherichia_phage	55.8	1.5e-51
2827734:2827750	attR	CAGGCGGAGCTGGATGC	NA	NA	NA	NA
>prophage 6
NC_011149	Salmonella enterica subsp. enterica serovar Agona str. SL483, complete sequence	4798660	4337546	4384590	4798660	tRNA,holin,tail,plate	Burkholderia_phage(40.91%)	49	NA	NA
WP_000587738.1|4337546_4338275_-	hypothetical protein	NA	A0A077SLK3	Escherichia_phage	37.3	5.6e-35
WP_000084338.1|4339012_4339468_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023785434.1|4339464_4340070_-	DUF4376 domain-containing protein	NA	NA	NA	NA	NA
WP_001747515.1|4340074_4341820_-|tail	tail fiber protein	tail	A0A0M3ULF6	Salmonella_phage	51.7	1.2e-51
WP_000359502.1|4341822_4342455_-|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	56.4	1.1e-23
WP_000951740.1|4342447_4343563_-|plate	baseplate J/gp47 family protein	plate	Q6QI99	Burkholderia_phage	51.2	2.9e-99
WP_001093501.1|4343553_4343913_-	GPW/gp25 family protein	NA	Q6QIA0	Burkholderia_phage	64.2	2.8e-35
WP_000632050.1|4344076_4345624_-	hypothetical protein	NA	B9UDL6	Salmonella_phage	29.9	2.5e-48
WP_000703629.1|4345623_4346553_-	glycosyltransferase family 2 protein	NA	S5FKN0	Shigella_phage	84.1	7.9e-151
WP_000593184.1|4346549_4346912_-	GtrA family protein	NA	U5P0S6	Shigella_phage	70.8	9.6e-44
WP_000679392.1|4347239_4347962_-|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	42.0	3.9e-12
WP_000818151.1|4347971_4349015_-	phage late control D family protein	NA	Q6QIA2	Burkholderia_phage	45.3	8.5e-77
WP_001269716.1|4349002_4349212_-|tail	tail protein X	tail	A4JWL2	Burkholderia_virus	60.3	9.8e-17
WP_000271418.1|4349211_4350165_-|tail	phage tail protein	tail	A4JWL1	Burkholderia_virus	50.8	3.9e-36
WP_001262488.1|4350164_4352519_-|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	30.6	3.1e-66
WP_001185654.1|4352615_4352744_-|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_001003644.1|4352703_4353021_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_000907494.1|4353072_4353597_-|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	69.5	2.8e-68
WP_000729845.1|4353596_4355024_-|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	71.6	2.8e-195
WP_000875314.1|4355013_4355211_-	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
WP_000449437.1|4355207_4355663_-	Gp37 family protein	NA	NA	NA	NA	NA
WP_000777266.1|4355821_4356136_-	membrane protein	NA	Q6QIC4	Burkholderia_phage	49.1	6.4e-20
WP_001270445.1|4356148_4356754_-	lytic transglycosylase domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	61.0	5.9e-62
WP_001226439.1|4356756_4357044_-|holin	putative holin	holin	Q6QIC8	Burkholderia_phage	48.1	3.0e-16
WP_000615248.1|4357620_4357968_+	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	51.5	4.9e-21
WP_000136394.1|4358098_4359448_-	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
WP_000790027.1|4359792_4361442_+	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_023165043.1|4361885_4362128_+	hypothetical protein	NA	NA	NA	NA	NA
WP_125469230.1|4362161_4362830_+	YjbF family lipoprotein	NA	NA	NA	NA	NA
WP_000977889.1|4362826_4363564_+	capsule biosynthesis GfcC family protein	NA	NA	NA	NA	NA
WP_000750800.1|4363563_4365660_+	YjbH domain-containing protein	NA	NA	NA	NA	NA
WP_000982752.1|4365802_4366213_+	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
WP_001252085.1|4366378_4367269_-	maltose ABC transporter permease MalG	NA	NA	NA	NA	NA
WP_000382563.1|4367283_4368828_-	maltose ABC transporter permease MalF	NA	NA	NA	NA	NA
WP_000695420.1|4368959_4370150_-	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA	NA
WP_000179176.1|4370511_4371621_+	maltose/maltodextrin ABC transporter ATP-binding protein MalK	NA	Q6GZ03	Mycoplasma_phage	47.2	6.2e-17
WP_000973644.1|4371709_4373068_+	maltoporin	NA	NA	NA	NA	NA
WP_000782497.1|4373231_4374149_+	maltose operon protein MalM	NA	NA	NA	NA	NA
WP_000019230.1|4374329_4374827_+	chorismate lyase	NA	NA	NA	NA	NA
WP_000455249.1|4374840_4375713_+	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
WP_000017360.1|4375811_4378232_-	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA	NA
WP_000002900.1|4378402_4378771_+	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_000646079.1|4378879_4379488_+	repressor LexA	NA	Q9G0C2	Lactococcus_phage	38.0	1.0e-13
WP_001128112.1|4379666_4380992_+	MATE family efflux transporter DinF	NA	NA	NA	NA	NA
WP_001575282.1|4380988_4381102_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001030592.1|4381123_4381333_+	CsbD family protein	NA	NA	NA	NA	NA
WP_000416271.1|4381431_4381947_-	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA	NA
WP_001039322.1|4382193_4383504_+	conjugal transfer protein TraF	NA	NA	NA	NA	NA
WP_001182229.1|4383591_4384590_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
>prophage 7
NC_011149	Salmonella enterica subsp. enterica serovar Agona str. SL483, complete sequence	4798660	4635215	4679596	4798660	integrase,transposase,tail,tRNA	Enterobacteria_phage(25.0%)	48	4661013:4661028	4677560:4677575
WP_000252549.1|4635215_4635662_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000047544.1|4635736_4636123_-	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA	NA
WP_000148570.1|4636199_4636661_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_000013055.1|4636673_4637609_-	aspartate carbamoyltransferase	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	39.2	6.5e-52
WP_000249504.1|4637644_4637746_-	pyr operon leader peptide	NA	NA	NA	NA	NA
WP_001518160.1|4637725_4637866_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000666051.1|4637835_4638324_-	arginine repressor	NA	NA	NA	NA	NA
WP_000514438.1|4638510_4639914_-	YfcC family protein	NA	NA	NA	NA	NA
WP_000237031.1|4639969_4640974_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_000428749.1|4641085_4642018_-	carbamate kinase	NA	NA	NA	NA	NA
WP_000410847.1|4642028_4643249_-	arginine deiminase	NA	NA	NA	NA	NA
WP_000583453.1|4643924_4644377_+	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA	NA
WP_000103041.1|4644450_4645455_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_000002940.1|4645620_4646037_+	ribonuclease E inhibitor RraB	NA	NA	NA	NA	NA
WP_000218447.1|4646048_4646861_+|tRNA	tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE	tRNA	NA	NA	NA	NA
WP_000826193.1|4647105_4647594_-	DUF3617 domain-containing protein	NA	NA	NA	NA	NA
WP_001747736.1|4647701_4648205_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001066989.1|4648399_4649587_+	DUF898 domain-containing protein	NA	NA	NA	NA	NA
WP_000416337.1|4649728_4652584_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.4	9.3e-142
WP_001523689.1|4652583_4653027_-	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
WP_000397158.1|4653163_4654675_-	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	38.7	8.3e-49
WP_000584132.1|4655068_4656169_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
WP_001182242.1|4656168_4657251_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_001244060.1|4657446_4658445_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_001128356.1|4658508_4659828_-	gnt-II system L-idonate transporter	NA	NA	NA	NA	NA
WP_000998688.1|4659889_4660654_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_000453362.1|4660678_4661710_-	L-idonate 5-dehydrogenase	NA	NA	NA	NA	NA
4661013:4661028	attL	TTTTCTGCTTTCCAGC	NA	NA	NA	NA
WP_000896759.1|4661926_4662457_+	gluconokinase	NA	NA	NA	NA	NA
WP_000152567.1|4662484_4663504_-	NAD(P)-dependent alcohol dehydrogenase	NA	A0A2K9L7I1	Tupanvirus	30.5	3.9e-42
WP_000772651.1|4663975_4665238_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	Q7M297	Enterobacteria_phage	35.6	2.8e-66
WP_001066528.1|4665268_4665907_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000455466.1|4666277_4666508_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_000190567.1|4666604_4666790_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001118612.1|4666977_4667154_+	host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	55.6	4.2e-05
WP_001247004.1|4667146_4667506_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001027149.1|4667537_4667822_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001075576.1|4667818_4668202_+	DUF5375 family protein	NA	NA	NA	NA	NA
WP_000211874.1|4668198_4670871_+	TOPRIM and DUF927 domain-containing protein	NA	A0A1B0VP75	Pseudomonas_phage	34.4	2.1e-58
WP_001066192.1|4671271_4672033_+	septation initiation protein	NA	NA	NA	NA	NA
WP_001185338.1|4672032_4672305_+	ogr/Delta-like zinc finger family protein	NA	A0A2I8TV89	Erwinia_phage	46.9	6.3e-08
WP_001292737.1|4672681_4672993_+|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	66.0	2.4e-27
WP_001747644.1|4673007_4673127_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
WP_001280979.1|4673119_4675753_+|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	31.3	5.8e-106
WP_096323101.1|4676858_4676978_+	DUF4942 domain-containing protein	NA	NA	NA	NA	NA
WP_000254751.1|4677054_4677303_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_000016244.1|4677411_4677651_+	type II toxin-antitoxin system CcdA family antitoxin	NA	NA	NA	NA	NA
4677560:4677575	attR	GCTGGAAAGCAGAAAA	NA	NA	NA	NA
WP_001199743.1|4677653_4677962_+	CcdB family protein	NA	NA	NA	NA	NA
WP_096322988.1|4678341_4679596_+|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	2.2e-18
