assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000021485.1_ASM2148v1	NC_011761	Acidithiobacillus ferrooxidans ATCC 23270, complete sequence	1	934317-934408	1	CRISPRCasFinder	no	cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f	Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	Type IV-A	CTTCTCAGCCGCGCGTGTGGCGGCATACCGC	31	0	0	NA	NA	NA	1	1	TypeV,TypeIV-A	Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	NA|85aa|up_9|NC_011761.1_928082_928337_+,NA|76aa|up_8|NC_011761.1_928342_928570_+,NA|71aa|up_5|NC_011761.1_930583_930796_-,NA|100aa|up_4|NC_011761.1_930795_931095_-,NA|151aa|up_3|NC_011761.1_931236_931689_+,NA|54aa|down_5|NC_011761.1_942757_942919_+,NA|130aa|down_6|NC_011761.1_942951_943341_+,NA|92aa|down_7|NC_011761.1_943512_943788_+,NA|233aa|down_9|NC_011761.1_946027_946726_+	NA|85aa|up_9|NC_011761.1_928082_928337_+	NA	NA|76aa|up_8|NC_011761.1_928342_928570_+	NA	NA|298aa|up_7|NC_011761.1_928853_929747_+	cd09128, PLDc_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized phospholipase D-like proteins	NA|228aa|up_6|NC_011761.1_929743_930427_+	COG3471, COG3471, Predicted periplasmic/secreted protein [Function unknown]	NA|71aa|up_5|NC_011761.1_930583_930796_-	NA	NA|100aa|up_4|NC_011761.1_930795_931095_-	NA	NA|151aa|up_3|NC_011761.1_931236_931689_+	NA	NA|217aa|up_2|NC_011761.1_931690_932341_+	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain	cas14i|502aa|up_1|NC_011761.1_932337_933843_+	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain	NA|117aa|up_0|NC_011761.1_933893_934244_+	cd08161, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily	DinG|744aa|down_0|NC_011761.1_935087_937319_-	TIGR03117, cas_csf4, CRISPR type AFERR-associated DEAD/DEAH-box helicase Csf4	csf1gr8|250aa|down_1|NC_011761.1_937391_938141_+	TIGR03114, cas8u_csf1, CRISPR type AFERR-associated protein Csf1	csf2gr7|354aa|down_2|NC_011761.1_938137_939199_+	TIGR03115, cas7_csf2, CRISPR type IV/AFERR-associated protein Csf2	csf3gr5|231aa|down_3|NC_011761.1_939195_939888_+	cd09707, Csf3_U, CRISPR/Cas system-associated RAMP superfamily protein Csf3	cas6f|188aa|down_4|NC_011761.1_940064_940628_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|54aa|down_5|NC_011761.1_942757_942919_+	NA	NA|130aa|down_6|NC_011761.1_942951_943341_+	NA	NA|92aa|down_7|NC_011761.1_943512_943788_+	NA	NA|712aa|down_8|NC_011761.1_943787_945923_+	TIGR01448, recD_rel, helicase, putative, RecD/TraA family	NA|233aa|down_9|NC_011761.1_946027_946726_+	NA
GCF_000021485.1_ASM2148v1	NC_011761	Acidithiobacillus ferrooxidans ATCC 23270, complete sequence	2	934674-934937	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2	Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	Type IV-A	CTTCTCAGCCGCGCGTGTGGCGGCATACCGC,CTTCTCAGCCGCGCNNNTGGCGGCANACCNC,TCTTCTCAGCCGCGCGTGTGGCGGCATACCGC	31,31,32	0	0	NA	NA	NA:NA:NA	4,4,2	4	TypeV,TypeIV-A	Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	NA|85aa|up_9|NC_011761.1_928082_928337_+,NA|76aa|up_8|NC_011761.1_928342_928570_+,NA|71aa|up_5|NC_011761.1_930583_930796_-,NA|100aa|up_4|NC_011761.1_930795_931095_-,NA|151aa|up_3|NC_011761.1_931236_931689_+,NA|54aa|down_5|NC_011761.1_942757_942919_+,NA|130aa|down_6|NC_011761.1_942951_943341_+,NA|92aa|down_7|NC_011761.1_943512_943788_+,NA|233aa|down_9|NC_011761.1_946027_946726_+	NA|85aa|up_9|NC_011761.1_928082_928337_+	NA	NA|76aa|up_8|NC_011761.1_928342_928570_+	NA	NA|298aa|up_7|NC_011761.1_928853_929747_+	cd09128, PLDc_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized phospholipase D-like proteins	NA|228aa|up_6|NC_011761.1_929743_930427_+	COG3471, COG3471, Predicted periplasmic/secreted protein [Function unknown]	NA|71aa|up_5|NC_011761.1_930583_930796_-	NA	NA|100aa|up_4|NC_011761.1_930795_931095_-	NA	NA|151aa|up_3|NC_011761.1_931236_931689_+	NA	NA|217aa|up_2|NC_011761.1_931690_932341_+	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain	cas14i|502aa|up_1|NC_011761.1_932337_933843_+	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain	NA|117aa|up_0|NC_011761.1_933893_934244_+	cd08161, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily	DinG|744aa|down_0|NC_011761.1_935087_937319_-	TIGR03117, cas_csf4, CRISPR type AFERR-associated DEAD/DEAH-box helicase Csf4	csf1gr8|250aa|down_1|NC_011761.1_937391_938141_+	TIGR03114, cas8u_csf1, CRISPR type AFERR-associated protein Csf1	csf2gr7|354aa|down_2|NC_011761.1_938137_939199_+	TIGR03115, cas7_csf2, CRISPR type IV/AFERR-associated protein Csf2	csf3gr5|231aa|down_3|NC_011761.1_939195_939888_+	cd09707, Csf3_U, CRISPR/Cas system-associated RAMP superfamily protein Csf3	cas6f|188aa|down_4|NC_011761.1_940064_940628_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|54aa|down_5|NC_011761.1_942757_942919_+	NA	NA|130aa|down_6|NC_011761.1_942951_943341_+	NA	NA|92aa|down_7|NC_011761.1_943512_943788_+	NA	NA|712aa|down_8|NC_011761.1_943787_945923_+	TIGR01448, recD_rel, helicase, putative, RecD/TraA family	NA|233aa|down_9|NC_011761.1_946027_946726_+	NA
GCF_000021485.1_ASM2148v1	NC_011761	Acidithiobacillus ferrooxidans ATCC 23270, complete sequence	3	940769-941144	3	CRISPRCasFinder	no	cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2	Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	Type IV-A	CCGCCATGTGTGCGGCTGAGAAC	23	0	0	NA	NA	NA	6	6	TypeV,TypeIV-A	Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	NA|100aa|up_9|NC_011761.1_930795_931095_-,NA|151aa|up_8|NC_011761.1_931236_931689_+,NA|54aa|down_0|NC_011761.1_942757_942919_+,NA|130aa|down_1|NC_011761.1_942951_943341_+,NA|92aa|down_2|NC_011761.1_943512_943788_+,NA|233aa|down_4|NC_011761.1_946027_946726_+,NA|81aa|down_5|NC_011761.1_946744_946987_+,NA|166aa|down_6|NC_011761.1_947029_947527_-,NA|297aa|down_8|NC_011761.1_949566_950457_+,NA|198aa|down_9|NC_011761.1_950407_951001_+	NA|100aa|up_9|NC_011761.1_930795_931095_-	NA	NA|151aa|up_8|NC_011761.1_931236_931689_+	NA	NA|217aa|up_7|NC_011761.1_931690_932341_+	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain	cas14i|502aa|up_6|NC_011761.1_932337_933843_+	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain	NA|117aa|up_5|NC_011761.1_933893_934244_+	cd08161, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily	DinG|744aa|up_4|NC_011761.1_935087_937319_-	TIGR03117, cas_csf4, CRISPR type AFERR-associated DEAD/DEAH-box helicase Csf4	csf1gr8|250aa|up_3|NC_011761.1_937391_938141_+	TIGR03114, cas8u_csf1, CRISPR type AFERR-associated protein Csf1	csf2gr7|354aa|up_2|NC_011761.1_938137_939199_+	TIGR03115, cas7_csf2, CRISPR type IV/AFERR-associated protein Csf2	csf3gr5|231aa|up_1|NC_011761.1_939195_939888_+	cd09707, Csf3_U, CRISPR/Cas system-associated RAMP superfamily protein Csf3	cas6f|188aa|up_0|NC_011761.1_940064_940628_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|54aa|down_0|NC_011761.1_942757_942919_+	NA	NA|130aa|down_1|NC_011761.1_942951_943341_+	NA	NA|92aa|down_2|NC_011761.1_943512_943788_+	NA	NA|712aa|down_3|NC_011761.1_943787_945923_+	TIGR01448, recD_rel, helicase, putative, RecD/TraA family	NA|233aa|down_4|NC_011761.1_946027_946726_+	NA	NA|81aa|down_5|NC_011761.1_946744_946987_+	NA	NA|166aa|down_6|NC_011761.1_947029_947527_-	NA	NA|546aa|down_7|NC_011761.1_947932_949570_+	TIGR03183, DNA_S_dndC, putative sulfurtransferase DndC	NA|297aa|down_8|NC_011761.1_949566_950457_+	NA	NA|198aa|down_9|NC_011761.1_950407_951001_+	NA
GCF_000021485.1_ASM2148v1	NC_011761	Acidithiobacillus ferrooxidans ATCC 23270, complete sequence	4	941242-941384	4	CRISPRCasFinder	no	cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2	Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	Type IV-A	CCGCCATGTGTGCGGCTGAGAAC	23	0	0	NA	NA	NA	2	2	TypeV,TypeIV-A	Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	NA|100aa|up_9|NC_011761.1_930795_931095_-,NA|151aa|up_8|NC_011761.1_931236_931689_+,NA|54aa|down_0|NC_011761.1_942757_942919_+,NA|130aa|down_1|NC_011761.1_942951_943341_+,NA|92aa|down_2|NC_011761.1_943512_943788_+,NA|233aa|down_4|NC_011761.1_946027_946726_+,NA|81aa|down_5|NC_011761.1_946744_946987_+,NA|166aa|down_6|NC_011761.1_947029_947527_-,NA|297aa|down_8|NC_011761.1_949566_950457_+,NA|198aa|down_9|NC_011761.1_950407_951001_+	NA|100aa|up_9|NC_011761.1_930795_931095_-	NA	NA|151aa|up_8|NC_011761.1_931236_931689_+	NA	NA|217aa|up_7|NC_011761.1_931690_932341_+	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain	cas14i|502aa|up_6|NC_011761.1_932337_933843_+	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain	NA|117aa|up_5|NC_011761.1_933893_934244_+	cd08161, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily	DinG|744aa|up_4|NC_011761.1_935087_937319_-	TIGR03117, cas_csf4, CRISPR type AFERR-associated DEAD/DEAH-box helicase Csf4	csf1gr8|250aa|up_3|NC_011761.1_937391_938141_+	TIGR03114, cas8u_csf1, CRISPR type AFERR-associated protein Csf1	csf2gr7|354aa|up_2|NC_011761.1_938137_939199_+	TIGR03115, cas7_csf2, CRISPR type IV/AFERR-associated protein Csf2	csf3gr5|231aa|up_1|NC_011761.1_939195_939888_+	cd09707, Csf3_U, CRISPR/Cas system-associated RAMP superfamily protein Csf3	cas6f|188aa|up_0|NC_011761.1_940064_940628_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|54aa|down_0|NC_011761.1_942757_942919_+	NA	NA|130aa|down_1|NC_011761.1_942951_943341_+	NA	NA|92aa|down_2|NC_011761.1_943512_943788_+	NA	NA|712aa|down_3|NC_011761.1_943787_945923_+	TIGR01448, recD_rel, helicase, putative, RecD/TraA family	NA|233aa|down_4|NC_011761.1_946027_946726_+	NA	NA|81aa|down_5|NC_011761.1_946744_946987_+	NA	NA|166aa|down_6|NC_011761.1_947029_947527_-	NA	NA|546aa|down_7|NC_011761.1_947932_949570_+	TIGR03183, DNA_S_dndC, putative sulfurtransferase DndC	NA|297aa|down_8|NC_011761.1_949566_950457_+	NA	NA|198aa|down_9|NC_011761.1_950407_951001_+	NA
GCF_000021485.1_ASM2148v1	NC_011761	Acidithiobacillus ferrooxidans ATCC 23270, complete sequence	5	1028928-1029108	2	PILER-CR	no	Cas9_archaeal	Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	Type II-A, or Type II-C?, Type II-B	CCGACGCTCTGCCAACTGAGCTAA	24	0	0	NA	NA	NA	2	2	TypeII-A,orTypeII-C?,TypeII-B	Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	NA|121aa|up_8|NC_011761.1_1023248_1023611_+,NA|89aa|up_7|NC_011761.1_1023622_1023889_+,NA|185aa|up_6|NC_011761.1_1023900_1024455_+,NA|146aa|up_5|NC_011761.1_1024641_1025079_-,NA|181aa|up_4|NC_011761.1_1025219_1025762_-,NA|76aa|up_2|NC_011761.1_1026497_1026725_-,NA|133aa|up_1|NC_011761.1_1026724_1027123_-,NA|83aa|up_0|NC_011761.1_1028605_1028854_-,NA|106aa|down_0|NC_011761.1_1029650_1029968_-,NA|93aa|down_1|NC_011761.1_1030241_1030520_-,NA|114aa|down_2|NC_011761.1_1030762_1031104_-,NA|106aa|down_3|NC_011761.1_1031544_1031862_-,NA|221aa|down_4|NC_011761.1_1031929_1032592_-,NA|77aa|down_6|NC_011761.1_1037414_1037645_-,NA|208aa|down_8|NC_011761.1_1038370_1038994_-	NA|302aa|up_9|NC_011761.1_1022136_1023042_-	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|121aa|up_8|NC_011761.1_1023248_1023611_+	NA	NA|89aa|up_7|NC_011761.1_1023622_1023889_+	NA	NA|185aa|up_6|NC_011761.1_1023900_1024455_+	NA	NA|146aa|up_5|NC_011761.1_1024641_1025079_-	NA	NA|181aa|up_4|NC_011761.1_1025219_1025762_-	NA	Cas9_archaeal|182aa|up_3|NC_011761.1_1025906_1026452_-	pfam14279, HNH_5, HNH endonuclease	NA|76aa|up_2|NC_011761.1_1026497_1026725_-	NA	NA|133aa|up_1|NC_011761.1_1026724_1027123_-	NA	NA|83aa|up_0|NC_011761.1_1028605_1028854_-	NA	NA|106aa|down_0|NC_011761.1_1029650_1029968_-	NA	NA|93aa|down_1|NC_011761.1_1030241_1030520_-	NA	NA|114aa|down_2|NC_011761.1_1030762_1031104_-	NA	NA|106aa|down_3|NC_011761.1_1031544_1031862_-	NA	NA|221aa|down_4|NC_011761.1_1031929_1032592_-	NA	NA|280aa|down_5|NC_011761.1_1036578_1037418_-	pfam14216, DUF4326, Domain of unknown function (DUF4326)	NA|77aa|down_6|NC_011761.1_1037414_1037645_-	NA	NA|146aa|down_7|NC_011761.1_1037912_1038350_-	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes	NA|208aa|down_8|NC_011761.1_1038370_1038994_-	NA	NA|277aa|down_9|NC_011761.1_1039165_1039996_+	pfam08722, Tn7_Tnp_TnsA_N, TnsA endonuclease N terminal
GCF_000021485.1_ASM2148v1	NC_011761	Acidithiobacillus ferrooxidans ATCC 23270, complete sequence	6	1061556-1061658	5	CRISPRCasFinder	no	c2c8_V-U2	Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	Type V-U2	GCCGGTGGAACCATTAGCGGCAGCA	25	0	0	NA	NA	NA	1	1	TypeV-U2	Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	NA|77aa|up_9|NC_011761.1_1037414_1037645_-,NA|208aa|up_7|NC_011761.1_1038370_1038994_-,NA|556aa|up_2|NC_011761.1_1045660_1047328_+,NA|146aa|down_3|NC_011761.1_1068679_1069117_+,NA|155aa|down_4|NC_011761.1_1069933_1070398_-,NA|117aa|down_6|NC_011761.1_1071810_1072161_-	NA|77aa|up_9|NC_011761.1_1037414_1037645_-	NA	NA|146aa|up_8|NC_011761.1_1037912_1038350_-	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes	NA|208aa|up_7|NC_011761.1_1038370_1038994_-	NA	NA|277aa|up_6|NC_011761.1_1039165_1039996_+	pfam08722, Tn7_Tnp_TnsA_N, TnsA endonuclease N terminal	NA|723aa|up_5|NC_011761.1_1039992_1042161_+	pfam00665, rve, Integrase core domain	NA|553aa|up_4|NC_011761.1_1042141_1043800_+	pfam13401, AAA_22, AAA domain	NA|610aa|up_3|NC_011761.1_1043811_1045641_+	pfam15978, TnsD, Tn7-like transposition protein D	NA|556aa|up_2|NC_011761.1_1045660_1047328_+	NA	NA|1143aa|up_1|NC_011761.1_1047409_1050838_-	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|992aa|up_0|NC_011761.1_1051041_1054017_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|197aa|down_0|NC_011761.1_1064691_1065282_+	smart00702, P4Hc, Prolyl 4-hydroxylase alpha subunit homologues	NA|687aa|down_1|NC_011761.1_1065301_1067362_+	pfam13469, Sulfotransfer_3, Sulfotransferase family	NA|386aa|down_2|NC_011761.1_1067358_1068516_+	COG0859, RfaF, ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]	NA|146aa|down_3|NC_011761.1_1068679_1069117_+	NA	NA|155aa|down_4|NC_011761.1_1069933_1070398_-	NA	c2c8_V-U2|409aa|down_5|NC_011761.1_1070499_1071726_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|117aa|down_6|NC_011761.1_1071810_1072161_-	NA	NA|204aa|down_7|NC_011761.1_1072192_1072804_-	cd10030, UDG-F4_TTUDGA_SPO1dp_like, Uracil DNA glycosylase family 4, includes Thermotoga maritima TTUDGA, Bacillus phage SPO1 DNA polymerase, and similar proteins	NA|239aa|down_8|NC_011761.1_1072803_1073520_-	pfam14243, DUF4343, Domain of unknown function (DUF4343)	NA|168aa|down_9|NC_011761.1_1073540_1074044_-	pfam07505, DUF5131, Protein of unknown function (DUF5131)
GCF_000021485.1_ASM2148v1	NC_011761	Acidithiobacillus ferrooxidans ATCC 23270, complete sequence	7	1235306-1235384	6	CRISPRCasFinder	no		Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	Orphan	GGGCGATTCGTTTCACCTCCTCCGC	25	0	0	NA	NA	NA	1	1	Orphan	Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	NA|483aa|up_3|NC_011761.1_1231480_1232929_+,NA	NA|91aa|up_9|NC_011761.1_1225516_1225789_-	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|71aa|up_8|NC_011761.1_1225869_1226082_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|274aa|up_7|NC_011761.1_1226865_1227687_-	cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain	NA|82aa|up_6|NC_011761.1_1227927_1228173_+	pfam11154, DUF2934, Protein of unknown function (DUF2934)	NA|379aa|up_5|NC_011761.1_1228367_1229504_+	cd03814, GT4-like, glycosyltransferase family 4 proteins	NA|405aa|up_4|NC_011761.1_1229537_1230752_+	cd03817, GT4_UGDG-like, UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins	NA|483aa|up_3|NC_011761.1_1231480_1232929_+	NA	NA|214aa|up_2|NC_011761.1_1232943_1233585_+	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|323aa|up_1|NC_011761.1_1233658_1234627_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|79aa|up_0|NC_011761.1_1234730_1234967_+	cd04784, HTH_CadR-PbrR, Helix-Turn-Helix DNA binding domain of the CadR and PbrR transcription regulators	NA|419aa|down_0|NC_011761.1_1235719_1236976_+	PRK10590, PRK10590, ATP-dependent RNA helicase RhlE; Provisional	NA|244aa|down_1|NC_011761.1_1237095_1237827_+	TIGR02154, PhoB, phosphate regulon transcriptional regulatory protein PhoB	NA|443aa|down_2|NC_011761.1_1237888_1239217_+	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR	NA|340aa|down_3|NC_011761.1_1239286_1240306_+	PRK10918, PRK10918, phosphate ABC transporter substrate-binding protein PstS	NA|330aa|down_4|NC_011761.1_1240350_1241340_+	PRK11275, pstC, phosphate ABC transporter permease PstC	NA|285aa|down_5|NC_011761.1_1241336_1242191_+	PRK11268, pstA, phosphate ABC transporter permease PstA	NA|256aa|down_6|NC_011761.1_1242190_1242958_+	PRK10744, pstB, phosphate ABC transporter ATP-binding protein PstB	NA|238aa|down_7|NC_011761.1_1242969_1243683_+	PRK11115, PRK11115, phosphate signaling complex protein PhoU	NA|504aa|down_8|NC_011761.1_1243685_1245197_+	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]	NA|197aa|down_9|NC_011761.1_1245450_1246041_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]
GCF_000021485.1_ASM2148v1	NC_011761	Acidithiobacillus ferrooxidans ATCC 23270, complete sequence	8	1475517-1475608	7	CRISPRCasFinder	no		Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	Orphan	CCTGGTCAGTACAACAACGGCTACGG	26	0	0	NA	NA	NA	1	1	Orphan	Cas9_archaeal,DEDDh,cas3,cas14i,DinG,csf1gr8,csf2gr7,csf3gr5,cas6f,c2c8_V-U2,c2c10_CAS-V-U3,csa3,PrimPol	NA|101aa|up_3|NC_011761.1_1471091_1471394_+,NA|65aa|up_0|NC_011761.1_1474686_1474881_+,NA|165aa|down_0|NC_011761.1_1476180_1476675_+,NA|111aa|down_3|NC_011761.1_1481793_1482126_-,NA|141aa|down_4|NC_011761.1_1482239_1482662_+,NA|63aa|down_7|NC_011761.1_1486743_1486932_-,NA|86aa|down_9|NC_011761.1_1488396_1488654_-	NA|309aa|up_9|NC_011761.1_1464224_1465151_+	cd08419, PBP2_CbbR_RubisCO_like, The C-terminal substrate binding of LysR-type transcriptional regulator (CbbR) of RubisCO operon, which is involved in the carbon dioxide fixation, contains the type 2 periplasmic binding fold	NA|286aa|up_8|NC_011761.1_1465594_1466452_+	pfam09995, DUF2236, Uncharacterized protein conserved in bacteria (DUF2236)	NA|223aa|up_7|NC_011761.1_1466761_1467430_+	pfam04335, VirB8, VirB8 protein	NA|382aa|up_6|NC_011761.1_1467442_1468588_+	pfam03524, CagX, Conjugal transfer protein	NA|334aa|up_5|NC_011761.1_1468589_1469591_+	TIGR02775, probable_conjugal_transfer_protein_TrbG, P-type conjugative transfer protein TrbG	NA|496aa|up_4|NC_011761.1_1469593_1471081_+	cd16429, VirB10, VirB10 forms part of core complex in Type IV secretion system (T4SS)	NA|101aa|up_3|NC_011761.1_1471091_1471394_+	NA	NA|224aa|up_2|NC_011761.1_1471390_1472062_+	cd16892, LT_VirB1-like, VirB1-like subfamily	NA|835aa|up_1|NC_011761.1_1472072_1474577_+	PRK13880, PRK13880, conjugal transfer coupling protein TraG; Provisional	NA|65aa|up_0|NC_011761.1_1474686_1474881_+	NA	NA|165aa|down_0|NC_011761.1_1476180_1476675_+	NA	NA|546aa|down_1|NC_011761.1_1479768_1481406_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|116aa|down_2|NC_011761.1_1481455_1481803_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|111aa|down_3|NC_011761.1_1481793_1482126_-	NA	NA|141aa|down_4|NC_011761.1_1482239_1482662_+	NA	NA|237aa|down_5|NC_011761.1_1482798_1483509_-	pfam07238, PilZ, PilZ domain	NA|880aa|down_6|NC_011761.1_1483679_1486319_-	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|63aa|down_7|NC_011761.1_1486743_1486932_-	NA	NA|300aa|down_8|NC_011761.1_1487169_1488069_-	cd09128, PLDc_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized phospholipase D-like proteins	NA|86aa|down_9|NC_011761.1_1488396_1488654_-	NA
