bac_id	spacer_id	hit_phage_id	hit_phage_def	spacer_sequence	hit_phage_region	hit_phage_sequence	mismatch	coverage	hmm_mismatch
NC_012590	1.12|993684|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	MT553347	Mycobacterium phage Awesomesauce, complete genome	CTCTGCTGATGCGATGGCCGCTCTTGATGAGGC	465-497	GTTGAATGATGCGATGGCCGCTGGTGATGAGCT	2	0.7575757575757576	9
NC_012590	1.17|993989|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	GTCAGCGTCCTGGTCGATGGTGAAGCCTTCGTC	537640-537672	GACGAAGTCTTCACCTTCGACCAGGTGGGTCAG	2	0.7575757575757576	7
NC_012590	1.17|993989|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	MT188704	Mesorhizobium phage Cp1R7A-A1, complete genome	GTCAGCGTCCTGGTCGATGGTGAAGCCTTCGTC	41004-41036	GCCCGCGTCGAGGTCGATGGTGAAGCCTATCTC	2	0.7272727272727273	7
NC_012590	1.20|994172|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NC_022995	Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence	CCTACAGCCGCACAATCCGCGCAGCCCTCAAAA	487770-487802	CGGCCCACACTGCGCGGACTGTGCTGCTGTAGG	2	0.7272727272727273	11
NC_012590	1.24|994416|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NZ_CP040765	Paracoccus sp. 2251 plasmid unnamed1, complete sequence	CGACTCCGATACCGCGTGGCACGCCGCAAACCA	141674-141706	TCATTGGCGGCGCGCCACGCGGTATCGTCGCCG	2	0.7272727272727273	7
NC_012590	1.27|994599|33|NC_012590|CRISPRCasFinder,CRT	NZ_CP009155	Burkholderia pseudomallei strain TSV202 plasmid 1, complete sequence	CTCTCCGAGCTCGCCGGCATGCGCAAAGCGGAG	123458-123490	CGGTGGGAGCTCGCCGACATGCGCAAGGCGATC	2	0.7272727272727273	9
NC_012590	1.27|994599|33|NC_012590|CRISPRCasFinder,CRT	NZ_CP015038	Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence	CTCTCCGAGCTCGCCGGCATGCGCAAAGCGGAG	168742-168774	CGTTGGGAGCTCGCCGACATGCGCAAGGCGATT	2	0.7272727272727273	9
NC_012590	1.27|994599|33|NC_012590|CRISPRCasFinder,CRT	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	CTCTCCGAGCTCGCCGGCATGCGCAAAGCGGAG	1572018-1572050	ACGCGCCGGCTGGCCGACATGCGCAAAGCGGAA	2	0.7272727272727273	10
NC_012590	1.27|994599|33|NC_012590|CRISPRCasFinder,CRT	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	CTCTCCGAGCTCGCCGGCATGCGCAAAGCGGAG	167617-167649	ATCAAACTGCTCGCCGGCCTGCACAAAGCGGAC	2	0.7272727272727273	9
NC_012590	1.27|994599|33|NC_012590|CRISPRCasFinder,CRT	NZ_CP042332	Bosea sp. F3-2 plasmid pB32-1, complete sequence	CTCTCCGAGCTCGCCGGCATGCGCAAAGCGGAG	207839-207871	CTCTCCGACCTCGCCGGCAAGCGCGTCGGCGTC	2	0.7272727272727273	9
NC_012590	1.27|994599|33|NC_012590|CRISPRCasFinder,CRT	NZ_CP015032	Burkholderia cenocepacia strain 842 plasmid pBcn842-1, complete sequence	CTCTCCGAGCTCGCCGGCATGCGCAAAGCGGAG	26444-26476	GATCGCCTTGCGCATGTCGGCGAGCTCCCAACG	2	0.7272727272727273	9
NC_012590	1.27|994599|33|NC_012590|CRISPRCasFinder,CRT	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	CTCTCCGAGCTCGCCGGCATGCGCAAAGCGGAG	1081632-1081664	TTCCGCTTTGCGCATGTCGGCCAGCCGGCGCGT	2	0.7272727272727273	10
NC_012590	1.27|994599|33|NC_012590|CRISPRCasFinder,CRT	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	CTCTCCGAGCTCGCCGGCATGCGCAAAGCGGAG	1100042-1100074	TTCCGCTTTGCGCATGTCGGCCAGCCGGCGCGT	2	0.7272727272727273	10
NC_012590	1.27|994599|33|NC_012590|CRISPRCasFinder,CRT	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	CTCTCCGAGCTCGCCGGCATGCGCAAAGCGGAG	1458222-1458254	TTCCGCTTTGCGCATGTCGGCCAGCCGGCGCGT	2	0.7272727272727273	10
NC_012590	1.27|994599|33|NC_012590|CRISPRCasFinder,CRT	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	CTCTCCGAGCTCGCCGGCATGCGCAAAGCGGAG	223938-223970	TTCCGCTTTGCGCATGTCGGCCAGCCGGCGCGT	2	0.7272727272727273	10
NC_012590	1.27|994599|33|NC_012590|CRISPRCasFinder,CRT	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	CTCTCCGAGCTCGCCGGCATGCGCAAAGCGGAG	1269028-1269060	TTCCGCTTTGCGCATGTCGGCCAGCCGGCGCGT	2	0.7272727272727273	10
NC_012590	1.32|994904|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NC_008383	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL8, complete sequence	CCTGGCGCTCGGTGTCGCCGGTGACGTTAAACG	143917-143949	TCGTAGTGGTCACCGCCGACACCGAGCGTCAGC	2	0.7272727272727273	10
NC_012590	1.32|994904|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NZ_CP050090	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b4, complete sequence	CCTGGCGCTCGGTGTCGCCGGTGACGTTAAACG	210863-210895	TCGTAGTGGTCACCGCCGACACCGAGCGTCAGC	2	0.7272727272727273	10
NC_012590	1.32|994904|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NZ_CP018231	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed3	CCTGGCGCTCGGTGTCGCCGGTGACGTTAAACG	21519-21551	GCTGACGCTCGGTGTCGGCGGTGACCACTACGA	2	0.7272727272727273	10
NC_012590	1.32|994904|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NZ_CP016292	Rhizobium leguminosarum strain Vaf10 plasmid unnamed4, complete sequence	CCTGGCGCTCGGTGTCGCCGGTGACGTTAAACG	92948-92980	GCTGACGCTCGGTGTCGGCGGTGACCACTACGA	2	0.7272727272727273	10
NC_012590	1.40|995392|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence	CGAAGGCGCATGGCTGGCGGCCAAGGGCTTCAA	429505-429537	GCGAAGCCCTTGTCCGCCAGCCAGGCGGCGACG	2	0.7575757575757576	7
NC_012590	1.50|996002|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	CCCCACCACGGCGGGATAGGCGCGGCCTCACCT	162099-162131	CCGAACAGCCGCGCCTCTCCCGCCGTGGCGGGC	2	0.7575757575757576	9
NC_012590	1.51|996063|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	MH940212	Salmonella phage PS5, complete genome	CACGTCCAACCCGTTTATTGATTTCACTGACAA	54061-54093	AGCGGTCAATCAGTTTATTGATTTCACTGAGAT	2	0.7272727272727273	8
NC_012590	1.51|996063|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	KC139524	Salmonella phage FSL SP-063 baseplate hub subunit and tail lysozyme, baseplate wedge subunit, hypothetical proteins, ribonucleotide reductase B subunit, hypothetical protein, ribonucleoside-diphosphate reductase subunit alpha, phosphate starvation-inducible protein, hypothetical proteins, DNA primase, hypothetical proteins, recombination endonuclease subunit, endonuclease subunit, RNA polymerase sigma factor, ribonuclease H, hypothetical protein, ATP-dependent helicase, DNA-binding HU protein, hypothetical proteins, putative membrane protein, hypothetical proteins, acyl carrier protein, hypothetical proteins, translation repressor protein, clamp loader subunit, clamp loader small subunit, sliding clamp, hypothetical protein, helicase, exonuclease, hypothetical protein, tail completion protein, hypothetical proteins, major capsid protein, prohead core protein, prohead core scaffolding protein and protease, hypothetical proteins, portal vertex protein, tail tube protein, GIY-YIG endonuclease, hypothetical protein, tail sheath protein, large terminase protein, hypothetical protein, tail sheath stabilizer and completion protein, neck protein, hypothetical protein, neck protein, hypothetical proteins, tail spike protein, and hypothetical protein genes, complete cds	CACGTCCAACCCGTTTATTGATTTCACTGACAA	34860-34892	AGCGGTCAATCAGTTTATTGATTTCACTGAGAT	2	0.7272727272727273	8
NC_012590	1.51|996063|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	FQ312032	Salmonella phage Vi01 complete sequence	CACGTCCAACCCGTTTATTGATTTCACTGACAA	82945-82977	AGCGGTCAATCAGTTTATTGATTTCACTGAGAT	2	0.7272727272727273	8
NC_012590	1.51|996063|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NC_015296	Salmonella phage Vi01, complete genome	CACGTCCAACCCGTTTATTGATTTCACTGACAA	82945-82977	AGCGGTCAATCAGTTTATTGATTTCACTGAGAT	2	0.7272727272727273	8
NC_012590	1.51|996063|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NC_042061	Salmonella phage STML-13-1, partial genome	CACGTCCAACCCGTTTATTGATTTCACTGACAA	55967-55999	AGCGGTCAATCAGTTTATTGATTTCACTGAGAT	2	0.7272727272727273	8
NC_012590	1.51|996063|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	JN673056	Escherichia phage PhaxI, complete genome	CACGTCCAACCCGTTTATTGATTTCACTGACAA	80732-80764	AGCGGTCAATCAGTTTATTGATTTCACTGAGAT	2	0.7272727272727273	8
NC_012590	1.51|996063|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	MH688040	Salmonella phage Mooltan, complete genome	CACGTCCAACCCGTTTATTGATTTCACTGACAA	77451-77483	ATCTCAGTGAAATCAATAAACTGATTGACCGCT	2	0.7272727272727273	8
NC_012590	1.51|996063|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NC_025446	Escherichia phage ECML-4, complete genome	CACGTCCAACCCGTTTATTGATTTCACTGACAA	133277-133309	ATCTCAGTGAAATCAATAAACTGATTGACCGCT	2	0.7272727272727273	8
NC_012590	1.51|996063|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	MN342150	Escherichia phage vB_EcoM_3HA11, complete genome	CACGTCCAACCCGTTTATTGATTTCACTGACAA	45669-45701	ATCTCAGTGAAATCAATAAACTGATTGACCGCT	2	0.7272727272727273	8
NC_012590	1.51|996063|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	MT074477	Salmonella phage barely, complete genome	CACGTCCAACCCGTTTATTGATTTCACTGACAA	56443-56475	ATCTCAGTGAAATCAATAAACTGATTGACCGCT	2	0.7272727272727273	8
NC_012590	1.51|996063|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NC_023856	Salmonella phage vB_SalM_SJ2, complete genome	CACGTCCAACCCGTTTATTGATTTCACTGACAA	1870-1902	ATCTCAGTGAAATCAATAAACTGATTGACCGCT	2	0.7272727272727273	8
NC_012590	1.51|996063|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	MH427377	Escherichia phage vB_EcoM Sa157lw, complete genome	CACGTCCAACCCGTTTATTGATTTCACTGACAA	45915-45947	ATCTCAGTGAAATCAATAAACTGATTGACCGCT	2	0.7272727272727273	8
NC_012590	1.51|996063|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	MG428992	Salmonella phage Mutine, complete genome	CACGTCCAACCCGTTTATTGATTTCACTGACAA	81054-81086	ATCTCAGTGAAATCAATAAACTGATTGACCGCT	2	0.7272727272727273	8
NC_012590	1.51|996063|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	MN066127	Salmonella phage Matapan, complete genome	CACGTCCAACCCGTTTATTGATTTCACTGACAA	77439-77471	ATCTCAGTGAAATCAATAAACTGATTGACCGCT	2	0.7272727272727273	8
NC_012590	1.53|996185|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	MT457475	Arthronema virus TR020, complete genome	CACGAAAAGGATGACATGAACACCCCAAACCAG	43615-43647	AGTCAGTGGGTTGTTCATGTCGTCCTTTTCGTT	2	0.7878787878787878	7
NC_012590	1.54|996246|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	CGTCGCCGGATAGTCCGACCCCGTTTGGTGAGA	1780331-1780363	CGTCTCCGGACAGTCCGACCCCGTCGACATATA	2	0.7272727272727273	9
NC_012590	1.59|996551|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	CCACGATGCGCTCGGATGGTTCAAGGGCATCCA	530175-530207	GTAAGGAGCGCGCGGATGATTCAAGGGCATCGC	2	0.7272727272727273	9
NC_012590	1.65|996917|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NZ_CP042915	Rhodococcus qingshengii strain RL1 plasmid unnamed2	GTCTCCACCCCGGAACTGGACGAGGTACGGGGC	395665-395697	GAACCTGTCCCGGTACTGGACGAGGTGCGGGGC	2	0.7575757575757576	8
NC_012590	1.68|997100|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NZ_CP017759	Cupriavidus necator strain NH9 plasmid pENH92, complete sequence	GCGAAAGCCCTTGCCTAGTCCGAGGTCGTCAGT	14216-14248	CCCTATGACGTCGCACTAGGCAAGGGCTTTCAG	2	0.7575757575757576	8
NC_012590	1.88|998320|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	CTTCACTCGGCCGATGTCGGCGGGGACCGTGAC	378898-378930	CACCCACACCCCGCCGGCATCGGCCGAGCGAAC	2	0.7272727272727273	9
NC_012590	1.88|998320|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	CTTCACTCGGCCGATGTCGGCGGGGACCGTGAC	210219-210251	CACCCACACCCCGCCGGCATCGGCCGAGCGAAC	2	0.7272727272727273	9
NC_012590	1.88|998320|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	CTTCACTCGGCCGATGTCGGCGGGGACCGTGAC	1792297-1792329	GTTCGCTCGGCCGATGCCGGCGGGGTGTGGGTG	2	0.7272727272727273	9
NC_012590	1.89|998381|33|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NZ_CP040761	Paracoccus sp. 2251 plasmid unnamed5, complete sequence	CCAGGTCCGTCGGGAGGAACTTCTCGGGCTTCA	190285-190317	GCGATTCCGTCTGGATGAACTTCTCGGGCTCGG	2	0.7575757575757576	9
NC_012590	1.93|998625|32|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	CCCCAACCTTCTGATCCGTAGAGAGAAGGTAA	527009-527040	CCCCAACCTTCTGATCCGTAGTCAGATGCTCT	2	0.8125	6
NC_012590	1.93|998625|32|NC_012590|CRISPRCasFinder,CRT,PILER-CR	KY613597	Corynebacterium phage LGCM-V2, complete genome	CCCCAACCTTCTGATCCGTAGAGAGAAGGTAA	36619-36650	TTCTTATCTGACTACGGATCAGAAGGTTGGGG	2	0.8125	6
NC_012590	1.93|998625|32|NC_012590|CRISPRCasFinder,CRT,PILER-CR	KY624612	Corynebacterium phage LGCM-V6, complete genome	CCCCAACCTTCTGATCCGTAGAGAGAAGGTAA	36619-36650	TTCTTATCTGACTACGGATCAGAAGGTTGGGG	2	0.8125	6
NC_012590	1.93|998625|32|NC_012590|CRISPRCasFinder,CRT,PILER-CR	KY566218	Corynebacterium phage LGCM-VI, complete genome	CCCCAACCTTCTGATCCGTAGAGAGAAGGTAA	36619-36650	TTCTTATCTGACTACGGATCAGAAGGTTGGGG	2	0.8125	6
NC_012590	1.93|998625|32|NC_012590|CRISPRCasFinder,CRT,PILER-CR	KY624613	Corynebacterium phage LGCM-V5, complete genome	CCCCAACCTTCTGATCCGTAGAGAGAAGGTAA	36619-36650	TTCTTATCTGACTACGGATCAGAAGGTTGGGG	2	0.8125	6
NC_012590	1.93|998625|32|NC_012590|CRISPRCasFinder,CRT,PILER-CR	KY624615	Corynebacterium phage LGCM-V8, complete genome	CCCCAACCTTCTGATCCGTAGAGAGAAGGTAA	36619-36650	TTCTTATCTGACTACGGATCAGAAGGTTGGGG	2	0.8125	6
NC_012590	1.93|998625|32|NC_012590|CRISPRCasFinder,CRT,PILER-CR	KY624611	Corynebacterium phage LGCM-V4, complete genome	CCCCAACCTTCTGATCCGTAGAGAGAAGGTAA	36622-36653	TTCTTATCTGACTACGGATCAGAAGGTTGGGG	2	0.8125	6
NC_012590	1.93|998625|32|NC_012590|CRISPRCasFinder,CRT,PILER-CR	K01723	Corynebacteriophage beta (C.diphtheriae) tox228 gene, complete cds	CCCCAACCTTCTGATCCGTAGAGAGAAGGTAA	2058-2089	TTCGAATCTGACTACGGATCAGAAGGTTGGGG	2	0.8125	6
NC_012590	1.93|998625|32|NC_012590|CRISPRCasFinder,CRT,PILER-CR	KY624616	Corynebacterium phage LGCM-V9, complete genome	CCCCAACCTTCTGATCCGTAGAGAGAAGGTAA	36619-36650	TTCTTATCTGACTACGGATCAGAAGGTTGGGG	2	0.8125	6
NC_012590	1.93|998625|32|NC_012590|CRISPRCasFinder,CRT,PILER-CR	KY624610	Corynebacterium phage LGCM-V3, complete genome	CCCCAACCTTCTGATCCGTAGAGAGAAGGTAA	36619-36650	TTCTTATCTGACTACGGATCAGAAGGTTGGGG	2	0.8125	6
NC_012590	1.93|998625|32|NC_012590|CRISPRCasFinder,CRT,PILER-CR	KY624614	Corynebacterium phage LGCM-V7, complete genome	CCCCAACCTTCTGATCCGTAGAGAGAAGGTAA	36619-36650	TTCTTATCTGACTACGGATCAGAAGGTTGGGG	2	0.8125	6
NC_012590	1.93|998625|32|NC_012590|CRISPRCasFinder,CRT,PILER-CR	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	CCCCAACCTTCTGATCCGTAGAGAGAAGGTAA	95619-95650	AGAGCATCTGACTACGGATCAGAAGGTTGCAG	2	0.71875	8
