assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000023265.1_ASM2326v1	NC_013124	Acidimicrobium ferrooxidans DSM 10331, complete sequence	1	444592-444691	1	CRISPRCasFinder	no		cas14k,cas14i,c2c9_V-U4,csa3,WYL,cas4,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csx1	Orphan	CGAGAAGGAGTGAGGTCTGTGAGGAGCGTCGACATG	36	0	0	NA	NA	NA	1	1	Orphan	cas14k,cas14i,c2c9_V-U4,csa3,WYL,cas4,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csx1	NA,NA	NA|481aa|up_9|NC_013124.1_435557_437000_+	cd01171, YXKO-related, B	NA|364aa|up_8|NC_013124.1_436996_438088_+	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase	NA|206aa|up_7|NC_013124.1_438026_438644_+	cd10030, UDG-F4_TTUDGA_SPO1dp_like, Uracil DNA glycosylase family 4, includes Thermotoga maritima TTUDGA, Bacillus phage SPO1 DNA polymerase, and similar proteins	NA|154aa|up_6|NC_013124.1_438640_439102_+	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE	NA|216aa|up_5|NC_013124.1_439098_439746_+	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|168aa|up_4|NC_013124.1_439742_440246_+	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|348aa|up_3|NC_013124.1_440242_441286_+	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	NA|100aa|up_2|NC_013124.1_441353_441653_+	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|545aa|up_1|NC_013124.1_441655_443290_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|164aa|up_0|NC_013124.1_443589_444081_-	COG4803, COG4803, Predicted membrane protein [Function unknown]	NA|107aa|down_0|NC_013124.1_444887_445208_+	pfam01527, HTH_Tnp_1, Transposase	NA|290aa|down_1|NC_013124.1_445207_446077_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|210aa|down_2|NC_013124.1_446082_446712_+	COG3889, COG3889, Predicted solute binding protein [General function prediction only]	NA|306aa|down_3|NC_013124.1_446708_447626_+	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein	NA|681aa|down_4|NC_013124.1_447622_449665_+	COG5650, COG5650, Predicted integral membrane protein [Function unknown]	NA|690aa|down_5|NC_013124.1_449666_451736_+	pfam09852, DUF2079, Predicted membrane protein (DUF2079)	NA|329aa|down_6|NC_013124.1_451817_452804_+	cd05828, Sortase_D_1, Sortase domain found in subfamily 1 of the class D family of sortases	NA|224aa|down_7|NC_013124.1_453107_453779_+	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|259aa|down_8|NC_013124.1_453757_454534_-	pfam13622, 4HBT_3, Thioesterase-like superfamily	NA|126aa|down_9|NC_013124.1_454577_454955_-	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning]
GCF_000023265.1_ASM2326v1	NC_013124	Acidimicrobium ferrooxidans DSM 10331, complete sequence	2	996601-998276	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas14k,cas14i,c2c9_V-U4,csa3,WYL,cas4,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csx1	Type I-E	GGATCACCCCCGCCTGCGCGGGGAGCAC,GGATCACCCCCGCCTGCGCGGGGAGCAC,GGATCACCCCCGCCTGCGCGGGGAGCAC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	27,27,26	27	TypeI-E	cas14k,cas14i,c2c9_V-U4,csa3,WYL,cas4,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csx1	NA|231aa|up_9|NC_013124.1_987512_988205_+,NA|114aa|up_4|NC_013124.1_993440_993782_+,NA	NA|231aa|up_9|NC_013124.1_987512_988205_+	NA	NA|438aa|up_8|NC_013124.1_988204_989518_+	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|258aa|up_7|NC_013124.1_989528_990302_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|317aa|up_6|NC_013124.1_990313_991264_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|724aa|up_5|NC_013124.1_991272_993444_+	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|114aa|up_4|NC_013124.1_993440_993782_+	NA	NA|145aa|up_3|NC_013124.1_993880_994315_+	PRK13380, PRK13380, glycine cleavage system protein H; Provisional	NA|159aa|up_2|NC_013124.1_994324_994801_+	PRK13380, PRK13380, glycine cleavage system protein H; Provisional	NA|164aa|up_1|NC_013124.1_995141_995633_+	pfam13686, DrsE_2, DsrE/DsrF/DrsH-like family	NA|213aa|up_0|NC_013124.1_995632_996271_+	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes	NA|277aa|down_0|NC_013124.1_998344_999175_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|293aa|down_1|NC_013124.1_999193_1000072_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|110aa|down_2|NC_013124.1_1000068_1000398_-	pfam01527, HTH_Tnp_1, Transposase	NA|110aa|down_3|NC_013124.1_1000504_1000834_-	pfam01527, HTH_Tnp_1, Transposase	cas2|93aa|down_4|NC_013124.1_1003366_1003645_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|315aa|down_5|NC_013124.1_1003641_1004586_-	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas6e|227aa|down_6|NC_013124.1_1004582_1005263_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|254aa|down_7|NC_013124.1_1005264_1006026_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|387aa|down_8|NC_013124.1_1006022_1007183_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|191aa|down_9|NC_013124.1_1007179_1007752_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)
GCF_000023265.1_ASM2326v1	NC_013124	Acidimicrobium ferrooxidans DSM 10331, complete sequence	3	1000880-1003348	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas14k,cas14i,c2c9_V-U4,csa3,WYL,cas4,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csx1	Type I-E	GGATCACCCCCGCCTGCGCGGGGAGCAC,GGATCACCCCCGCCTGCGCGGGGAGCAC,GGATCACCCCCGCCTGCGCGGGGAGCAC	28,28,28	2	3	1001030-1001062|1001457-1001490|1001457-1001490	NC_013124.1_998277-998309|NC_013124.1_1116825-1116792|NC_013124.1_1616730-1616697	I-E:I-E:I-E	40,40,40	40	TypeI-E	cas14k,cas14i,c2c9_V-U4,csa3,WYL,cas4,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csx1	NA|114aa|up_8|NC_013124.1_993440_993782_+,NA|46aa|down_8|NC_013124.1_1013815_1013953_+	NA|724aa|up_9|NC_013124.1_991272_993444_+	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|114aa|up_8|NC_013124.1_993440_993782_+	NA	NA|145aa|up_7|NC_013124.1_993880_994315_+	PRK13380, PRK13380, glycine cleavage system protein H; Provisional	NA|159aa|up_6|NC_013124.1_994324_994801_+	PRK13380, PRK13380, glycine cleavage system protein H; Provisional	NA|164aa|up_5|NC_013124.1_995141_995633_+	pfam13686, DrsE_2, DsrE/DsrF/DrsH-like family	NA|213aa|up_4|NC_013124.1_995632_996271_+	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes	NA|277aa|up_3|NC_013124.1_998344_999175_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|293aa|up_2|NC_013124.1_999193_1000072_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|110aa|up_1|NC_013124.1_1000068_1000398_-	pfam01527, HTH_Tnp_1, Transposase	NA|110aa|up_0|NC_013124.1_1000504_1000834_-	pfam01527, HTH_Tnp_1, Transposase	cas2|93aa|down_0|NC_013124.1_1003366_1003645_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|315aa|down_1|NC_013124.1_1003641_1004586_-	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas6e|227aa|down_2|NC_013124.1_1004582_1005263_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|254aa|down_3|NC_013124.1_1005264_1006026_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|387aa|down_4|NC_013124.1_1006022_1007183_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|191aa|down_5|NC_013124.1_1007179_1007752_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|537aa|down_6|NC_013124.1_1007748_1009359_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|923aa|down_7|NC_013124.1_1009360_1012129_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|46aa|down_8|NC_013124.1_1013815_1013953_+	NA	NA|258aa|down_9|NC_013124.1_1014609_1015383_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
