The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_012926	Streptococcus suis BM407, complete genome	2146229	31436	41698	2146229		Microbacterium_phage(16.67%)	7	NA	NA
WP_012775466.1|31436_35156_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.9	8.6e-39
WP_011921648.1|35158_36613_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.4	3.2e-58
WP_012774882.1|36668_37691_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A127KMF9	Cyanophage	42.7	1.3e-58
WP_011922533.1|37687_38239_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.5	3.6e-26
WP_011921652.1|38248_39796_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.6	2.6e-74
WP_011921653.1|39921_41184_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_011921654.1|41209_41698_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.0	2.7e-17
>prophage 2
NC_012926	Streptococcus suis BM407, complete genome	2146229	535570	553093	2146229	integrase	Streptococcus_phage(100.0%)	20	533140:533171	554459:554490
533140:533171	attL	TAGTGATAATTAATAGTTATCGGTAGGAGAAT	NA	NA	NA	NA
WP_001291561.1|535570_536788_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000814511.1|536869_537073_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_000857133.1|537533_537764_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000804885.1|537760_538183_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_001227347.1|538687_539041_+	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000336323.1|539100_539268_-	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_002371500.1|539386_541306_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.2	0.0e+00
WP_001791010.1|541321_541438_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001224318.1|541682_542615_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_000769868.1|542611_543613_-	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_000804748.1|543609_545787_-	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000331160.1|545789_548237_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000506270.1|548220_548727_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000342539.1|548701_549199_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_001009056.1|549315_549537_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000398284.1|549579_550785_-	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_000879507.1|550807_550960_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813488.1|550962_552348_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000985015.1|552376_552763_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000420682.1|552778_553093_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
554459:554490	attR	ATTCTCCTACCGATAACTATTAATTATCACTA	NA	NA	NA	NA
>prophage 3
NC_012926	Streptococcus suis BM407, complete genome	2146229	664268	670049	2146229		Bacillus_phage(33.33%)	7	NA	NA
WP_012027304.1|664268_665030_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.4	5.0e-34
WP_004298854.1|665223_665928_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.8	1.1e-38
WP_012027301.1|665920_667270_+	cell wall metabolism sensor histidine kinase VicK	NA	W8CYF6	Bacillus_phage	34.5	2.1e-35
WP_012027300.1|667276_668080_+	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	35.6	2.8e-35
WP_014735627.1|668335_668608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012027299.1|668594_669137_+	ATP-binding cassette domain-containing protein	NA	A0A2I4R674	Erysipelothrix_phage	35.1	5.9e-21
WP_012027298.1|669299_670049_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A1B0RXA0	Streptococcus_phage	32.9	3.4e-27
>prophage 4
NC_012926	Streptococcus suis BM407, complete genome	2146229	1031088	1039655	2146229	transposase	Streptococcus_phage(88.89%)	10	NA	NA
WP_002321849.1|1031088_1031826_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	100.0	3.7e-135
WP_073459356.1|1031971_1032256_+	topoisomerase DNA-binding C4 zinc finger domain-containing protein	NA	A0A1X9I6W8	Streptococcus_phage	93.0	2.3e-40
WP_001140406.1|1032297_1032672_+	TnpV protein	NA	A0A1B0RXG6	Streptococcus_phage	100.0	2.0e-68
WP_012775603.1|1033038_1034958_+	tetracycline resistance ribosomal protection protein Tet(O)	NA	A0A1B0RXH7	Streptococcus_phage	99.5	0.0e+00
WP_079394308.1|1035009_1035198_+	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	90.9	2.7e-18
WP_002294505.1|1035370_1036234_-	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	A0A1X9I6F2	Streptococcus_phage	100.0	8.7e-168
WP_012775604.1|1036266_1036950_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	3.9e-131
WP_012775605.1|1037076_1037550_-	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	35.8	5.1e-21
WP_012775606.1|1037652_1038678_-|transposase	IS1595-like element ISSsu9 family transposase	transposase	NA	NA	NA	NA
WP_012775607.1|1038785_1039655_-	nucleotidyltransferase domain-containing protein	NA	A0A1X9I6C9	Streptococcus_phage	90.3	8.8e-152
>prophage 5
NC_012926	Streptococcus suis BM407, complete genome	2146229	1047761	1057636	2146229		Streptococcus_phage(88.89%)	9	NA	NA
WP_012775114.1|1047761_1049579_+	ATP-dependent helicase	NA	G3MA40	Bacillus_virus	21.0	7.5e-12
WP_012775608.1|1050334_1050649_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	99.0	6.8e-54
WP_000985015.1|1050664_1051051_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_012775609.1|1051079_1052462_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	99.3	3.0e-263
WP_000398284.1|1052640_1053846_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|1053888_1054110_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|1054226_1054724_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|1054698_1055205_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|1055188_1057636_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
>prophage 6
NC_012926	Streptococcus suis BM407, complete genome	2146229	1128693	1135723	2146229	protease	Bacillus_phage(33.33%)	8	NA	NA
WP_002943192.1|1128693_1130526_-	elongation factor 4	NA	A0A2K9L2P9	Tupanvirus	38.8	2.2e-19
WP_012775626.1|1130807_1131479_-	membrane protein	NA	A0A1S5SAM6	Streptococcus_phage	35.2	3.0e-06
WP_012028095.1|1131582_1131996_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	42.5	4.3e-24
WP_012775089.1|1132018_1132606_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_002934974.1|1132661_1133888_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.2	1.2e-133
WP_002934972.1|1133909_1134083_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011922360.1|1134085_1134598_-	dihydrofolate reductase	NA	A0A076GDN3	Bacillus_phage	36.6	1.6e-20
WP_011922359.1|1134883_1135723_-	thymidylate synthase	NA	U5J9N5	Bacillus_phage	55.7	1.7e-88
>prophage 7
NC_012926	Streptococcus suis BM407, complete genome	2146229	1286821	1302166	2146229		Streptococcus_phage(100.0%)	16	NA	NA
WP_012775042.1|1286821_1287649_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	100.0	2.9e-152
WP_011922204.1|1287835_1288735_+	cation transporter	NA	M1Q1N9	Streptococcus_phage	99.7	5.1e-163
WP_002935368.1|1288751_1289105_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	100.0	1.9e-60
WP_011922203.1|1289088_1289595_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	97.0	7.0e-93
WP_011922202.1|1289597_1290779_-	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	99.7	7.8e-220
WP_011922201.1|1290832_1291390_-	GNAT family acetyltransferase	NA	M1PSC3	Streptococcus_phage	94.6	5.9e-93
WP_011922200.1|1291389_1292481_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	100.0	2.4e-207
WP_002935362.1|1292950_1293814_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	99.7	2.1e-158
WP_012775637.1|1293815_1294133_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	99.0	5.2e-54
WP_012775638.1|1294152_1295037_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	99.0	4.3e-154
WP_012775041.1|1295033_1295672_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	98.1	1.0e-112
WP_002935357.1|1295846_1296713_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	99.7	4.6e-153
WP_012775639.1|1296749_1298021_-	toxic anion resistance protein	NA	M1PLC8	Streptococcus_phage	98.3	3.3e-208
WP_011922194.1|1298026_1298854_-	hypothetical protein	NA	M1PFV6	Streptococcus_phage	98.5	1.0e-133
WP_011922763.1|1298947_1299604_-	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	98.6	2.7e-113
WP_012775640.1|1299928_1302166_-	DNA internalization-related competence protein ComEC/Rec2	NA	M1PSD2	Streptococcus_phage	96.7	1.2e-99
>prophage 8
NC_012926	Streptococcus suis BM407, complete genome	2146229	1383079	1396192	2146229		Streptococcus_phage(100.0%)	12	NA	NA
WP_012775429.1|1383079_1383757_-	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	99.1	8.1e-121
WP_011922111.1|1383766_1384456_-	capsular polysaccharide biosynthesis protein CpsC	NA	A0A1X9I5E1	Streptococcus_phage	96.1	1.3e-110
WP_012775020.1|1384473_1385919_-	LCP family protein	NA	A0A1X9I5X1	Streptococcus_phage	99.5	2.4e-226
WP_012775019.1|1386023_1386758_-	peroxide stress protein YaaA	NA	A0A1X9I5I0	Streptococcus_phage	99.5	1.5e-120
WP_011922108.1|1386880_1388140_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	98.8	1.2e-239
WP_002938910.1|1388238_1389090_-	DegV family protein	NA	A0A1X9I5J4	Streptococcus_phage	98.6	1.3e-152
WP_011922106.1|1389216_1389621_+	TetR/AcrR family transcriptional regulator	NA	A0A1X9I6A2	Streptococcus_phage	99.3	3.2e-64
WP_011922105.1|1389643_1390429_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	95.4	1.0e-130
WP_011922104.1|1390438_1391677_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	96.8	1.0e-217
WP_011922103.1|1391741_1392818_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	99.2	1.5e-193
WP_011922102.1|1392977_1395491_-	bifunctional DnaQ family exonuclease/ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	98.5	0.0e+00
WP_011922101.1|1395553_1396192_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	99.5	1.0e-125
>prophage 9
NC_012926	Streptococcus suis BM407, complete genome	2146229	1503702	1513765	2146229	integrase	Streptococcus_phage(90.0%)	18	1495064:1495078	1521175:1521189
1495064:1495078	attL	TGACAAGATATTTTC	NA	NA	NA	NA
WP_012775260.1|1503702_1504245_-|integrase	site-specific integrase	integrase	A0A1S5SCL7	Streptococcus_phage	78.9	1.1e-80
WP_014636468.1|1504231_1504417_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012027449.1|1504735_1506268_-	primase	NA	A0A1X9I717	Streptococcus_phage	42.3	4.9e-105
WP_012027450.1|1506282_1506855_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012027451.1|1506847_1507048_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012775262.1|1507059_1507263_-	membrane protein	NA	A0A1X9I5T6	Streptococcus_phage	73.1	2.4e-20
WP_012027452.1|1507283_1507601_-	hypothetical protein	NA	A0A1X9I5Z6	Streptococcus_phage	41.0	1.3e-09
WP_012027454.1|1507954_1508218_-	hypothetical protein	NA	A0A1S5S7M1	Streptococcus_phage	43.8	1.0e-07
WP_012775263.1|1508348_1508756_-	hypothetical protein	NA	A0A1X9I5V7	Streptococcus_phage	52.2	1.8e-35
WP_012027456.1|1508767_1509085_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012027457.1|1509071_1509293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012027458.1|1509289_1509532_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012027459.1|1509528_1509729_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014636470.1|1509718_1510009_-	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	40.7	1.8e-08
WP_012027461.1|1510326_1510515_-	helix-turn-helix transcriptional regulator	NA	R9QNG3	Lactococcus_phage	42.4	2.0e-05
WP_012027462.1|1510666_1511188_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I723	Streptococcus_phage	65.1	8.7e-14
WP_012028388.1|1511243_1511936_+	DUF3800 domain-containing protein	NA	NA	NA	NA	NA
WP_012775654.1|1512622_1513765_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	39.5	5.5e-69
1521175:1521189	attR	GAAAATATCTTGTCA	NA	NA	NA	NA
