The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_000907	Haemophilus influenzae Rd KW20, complete sequence	1830138	1105411	1117497	1830138		Escherichia_phage(71.43%)	12	NA	NA
WP_010869113.1|1105411_1106326_+	DNA cytosine methyltransferase	NA	M1PSQ0	Streptococcus_phage	30.6	6.0e-26
WP_080003770.1|1106471_1107911_-	meth protein	NA	NA	NA	NA	NA
WP_032828348.1|1107904_1108153_-	methionine synthase	NA	NA	NA	NA	NA
WP_010869114.1|1108430_1108931_-	ferredoxin-type protein NapF	NA	A0A077SLP0	Escherichia_phage	32.6	3.8e-14
WP_005693380.1|1108930_1109542_-	Tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	32.5	1.0e-21
WP_005693381.1|1109653_1110493_-	dimethyl sulfoxide reductase anchor subunit	NA	A0A077SK59	Escherichia_phage	31.4	5.5e-18
WP_005656008.1|1110494_1111112_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	56.8	2.2e-72
WP_005693382.1|1111122_1113543_-	molybdopterin-dependent oxidoreductase	NA	A0A077SK27	Escherichia_phage	50.6	4.8e-224
WP_010869115.1|1113796_1114906_+	transglutaminase family protein	NA	NA	NA	NA	NA
WP_010869116.1|1114947_1115241_+	membrane protein	NA	NA	NA	NA	NA
WP_005662887.1|1115249_1115528_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_005686318.1|1115652_1117497_-	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	29.3	2.8e-22
>prophage 2
NC_000907	Haemophilus influenzae Rd KW20, complete sequence	1830138	1500121	1513073	1830138	terminase,holin,integrase	Haemophilus_phage(45.45%)	16	1498816:1498829	1513211:1513224
1498816:1498829	attL	TGGTGCCTAGGGTC	NA	NA	NA	NA
WP_005693957.1|1500121_1501222_-	DUF2213 domain-containing protein	NA	Q7Y5U2	Haemophilus_phage	85.9	3.1e-138
WP_005693956.1|1501282_1501639_-	DUF2513 domain-containing protein	NA	NA	NA	NA	NA
WP_005693954.1|1503393_1504704_-	DUF1073 domain-containing protein	NA	Q7Y5U6	Haemophilus_phage	84.2	1.3e-210
WP_005693952.1|1506034_1506550_-|terminase	terminase small subunit	terminase	A0A1X9SFE5	Acinetobacter_phage	40.9	5.6e-21
WP_010869207.1|1506559_1507081_-	Rha family transcriptional regulator	NA	A0A0P0HSR5	Acinetobacter_phage	34.9	2.8e-20
WP_005693951.1|1507208_1507490_-	hypothetical protein	NA	Q776X1	Haemophilus_phage	73.3	9.4e-31
WP_005693950.1|1507401_1507677_-	DUF2570 family protein	NA	Q7Y5U9	Haemophilus_phage	47.2	2.5e-12
WP_005693948.1|1507669_1508272_-	glycoside hydrolase family 19 protein	NA	Q7Y5V0	Haemophilus_phage	53.4	2.1e-56
WP_005650535.1|1508240_1508597_-|holin	phage holin, lambda family	holin	NA	NA	NA	NA
WP_165442161.1|1508720_1508858_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005693946.1|1509961_1510261_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	45.3	7.9e-20
WP_005643896.1|1510257_1510551_+	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	46.6	8.3e-14
WP_050396694.1|1510581_1510944_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005693944.1|1511012_1511588_+	hypothetical protein	NA	A0A0M3LQ72	Mannheimia_phage	55.2	5.2e-52
WP_005693943.1|1511873_1512158_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005693942.1|1512158_1513073_-|integrase	site-specific integrase	integrase	A0A0M3LQN1	Mannheimia_phage	52.2	1.5e-80
1513211:1513224	attR	TGGTGCCTAGGGTC	NA	NA	NA	NA
>prophage 3
NC_000907	Haemophilus influenzae Rd KW20, complete sequence	1830138	1558773	1597183	1830138	tail,head,capsid,transposase,plate	Shigella_phage(29.41%)	47	NA	NA
WP_005645090.1|1558773_1559373_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	30.6	5.3e-15
WP_005693492.1|1559961_1560681_-	helix-turn-helix transcriptional regulator	NA	F6MII3	Haemophilus_phage	53.1	1.0e-65
WP_005693493.1|1560908_1561178_+	transcriptional regulator	NA	F6MII4	Haemophilus_phage	60.5	4.6e-19
WP_010869221.1|1561211_1563275_+|transposase	transposase	transposase	A0A2P9JZG7	Alteromonadaceae_phage	42.9	2.6e-125
WP_005693495.1|1563331_1563604_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005693497.1|1563536_1564007_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010869222.1|1564040_1564904_+	AAA family ATPase	NA	M4M9P4	Vibrio_phage	44.3	1.9e-61
WP_010869223.1|1564964_1565282_+	hypothetical protein	NA	A0A0M3LQH1	Mannheimia_phage	50.5	1.1e-16
WP_005693500.1|1565296_1565806_+	nuclease inhibitor	NA	F6MIJ0	Haemophilus_phage	77.7	1.6e-65
WP_005693501.1|1565802_1565964_+	hypothetical protein	NA	NA	NA	NA	NA
WP_164927869.1|1565963_1566233_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005693504.1|1566435_1566657_+	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005693505.1|1566656_1566830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005693506.1|1566832_1567393_+	DUF5420 family protein	NA	A0A0M3LP85	Mannheimia_phage	35.2	7.2e-22
WP_010869224.1|1567566_1568124_+	gp16 family protein	NA	A0A2I7S9B8	Vibrio_phage	30.6	4.2e-14
WP_005693508.1|1568120_1568675_+	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	54.6	8.3e-47
WP_005693510.1|1569308_1569815_+	hypothetical protein	NA	A0A1I9KF52	Aeromonas_phage	33.5	1.9e-13
WP_005693512.1|1570447_1570708_+	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	56.7	1.8e-12
WP_005693513.1|1570704_1570959_+	DUF2681 domain-containing protein	NA	NA	NA	NA	NA
WP_005693516.1|1571076_1571304_+	TraR/DksA family transcriptional regulator	NA	NA	NA	NA	NA
WP_032828368.1|1571303_1571630_+	DUF2730 domain-containing protein	NA	NA	NA	NA	NA
WP_010869227.1|1571634_1571943_+	hypothetical protein	NA	A0A2I7S9D8	Vibrio_phage	61.5	1.3e-17
WP_010869228.1|1571954_1572524_+	DUF3486 family protein	NA	A0A2I7S9D1	Vibrio_phage	44.3	7.2e-38
WP_005693520.1|1572523_1574050_+	hypothetical protein	NA	A0A2I7S9C5	Vibrio_phage	58.7	1.0e-158
WP_010869229.1|1574061_1575624_+	DUF935 domain-containing protein	NA	A0A0C4UQR8	Shigella_phage	53.1	9.9e-146
WP_010869230.1|1575714_1576959_+|capsid	minor capsid protein	capsid	C9DGN7	Escherichia_phage	40.9	1.4e-81
WP_005693523.1|1577096_1577537_+	phage virion morphogenesis protein	NA	NA	NA	NA	NA
WP_005693524.1|1577767_1578835_+	hypothetical protein	NA	A0A0C4UQU6	Shigella_phage	47.8	4.3e-76
WP_005693526.1|1578834_1579761_+|head	phage head protein	head	A0SMP3	Pseudomonas_virus	52.9	1.3e-76
WP_032828369.1|1580234_1580657_+	gp436 family protein	NA	A0A0C4UR02	Shigella_phage	37.6	7.5e-16
WP_005693530.1|1580656_1581208_+	DUF1834 family protein	NA	A0A0C4UQU7	Shigella_phage	42.0	2.6e-32
WP_005693531.1|1581220_1581412_+	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
WP_005693532.1|1581411_1582875_+|tail	phage tail sheath protein	tail	A0A0C4UQS0	Shigella_phage	46.6	6.3e-118
WP_005693533.1|1582884_1583241_+|tail	phage tail tube protein	tail	A0A0C4UQZ1	Shigella_phage	36.0	4.3e-12
WP_005693534.1|1583253_1583637_+	hypothetical protein	NA	C9DGP9	Escherichia_phage	49.6	5.6e-18
WP_010869233.1|1583717_1585613_+	tape measure domain-containing protein	NA	A0A2I7S9D9	Vibrio_phage	33.7	2.2e-54
WP_010869234.1|1585612_1586980_+	DNA circularization protein	NA	A0A0C4UR32	Shigella_phage	29.8	8.4e-40
WP_164927870.1|1586979_1587765_+|tail	phage tail protein	tail	A0A0C4UQS1	Shigella_phage	37.9	1.9e-44
WP_005693539.1|1588276_1588825_+|plate	phage baseplate assembly protein V	plate	A0A2I7S9F6	Vibrio_phage	44.0	4.7e-26
WP_005693540.1|1588833_1589241_+	hypothetical protein	NA	A0A0C4UR04	Shigella_phage	43.3	2.3e-22
WP_005693541.1|1589240_1590308_+|plate	baseplate J/gp47 family protein	plate	A0A0C4UQU9	Shigella_phage	43.1	4.6e-70
WP_165442165.1|1590333_1590900_+	YmfQ family protein	NA	A0A2I7S9L6	Vibrio_phage	34.6	1.3e-23
WP_005693543.1|1590899_1592771_+|tail	phage tail fiber protein	tail	A0A0M3LRW6	Mannheimia_phage	45.2	2.8e-46
WP_005693545.1|1593254_1593374_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_032828356.1|1593429_1594275_+	hypothetical protein	NA	F6MIM2	Haemophilus_phage	72.1	2.6e-116
WP_005693547.1|1594828_1595566_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005693548.1|1595752_1597183_-	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	NA	E3SJ88	Synechococcus_phage	44.6	4.1e-21
