The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_012988	Methylorubrum extorquens AM1, complete genome	5943768	767890	840442	5943768	transposase,tRNA,integrase	Aeromonas_phage(20.0%)	55	778649:778708	840452:841288
WP_012252470.1|767890_768934_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	45.0	6.8e-66
WP_015821224.1|769111_769825_+	uroporphyrinogen-III synthase	NA	NA	NA	NA	NA
WP_015821225.1|769980_772272_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015821226.1|772389_773925_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158020927.1|774700_775594_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_015821228.1|775755_776652_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041357411.1|776768_777404_+	NADPH-dependent F420 reductase	NA	NA	NA	NA	NA
WP_041357412.1|777505_778495_+	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
778649:778708	attL	TAGGCTCCGGACCCATAAGTTTGGCTTGGCGGGTGTGCCTGTGATTTCTTCCGGGTGAGG	NA	NA	NA	NA
WP_076611329.1|778717_779471_+|transposase	IS5-like element ISMex15 family transposase	transposase	NA	NA	NA	NA
WP_015821231.1|780310_781843_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015821232.1|782109_782730_-	recombinase family protein	NA	A0A219YB42	Aeromonas_phage	36.2	1.4e-15
WP_015821233.1|783113_786200_+	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.3	1.6e-14
WP_041357413.1|786332_788024_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_015821234.1|788350_789493_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015821235.1|789492_789840_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015821236.1|789885_790179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158020928.1|790297_791074_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041357414.1|791389_792193_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158020929.1|792355_792862_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015821232.1|793381_794002_+	recombinase family protein	NA	A0A219YB42	Aeromonas_phage	36.2	1.4e-15
WP_015821231.1|794268_795801_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015821240.1|796517_798377_-	recombinase family protein	NA	K4ICM1	Acidithiobacillus_phage	45.4	5.4e-90
WP_041358421.1|798369_798819_-	DUF2924 domain-containing protein	NA	K4I3X1	Acidithiobacillus_phage	42.4	7.7e-19
WP_085985081.1|798917_799301_-	DUF3489 domain-containing protein	NA	NA	NA	NA	NA
WP_015821243.1|800025_801039_-|transposase	IS110-like element ISMdi14B family transposase	transposase	NA	NA	NA	NA
WP_041357415.1|801507_802743_-	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_015821245.1|802745_803207_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080579848.1|805307_806012_+	glycerate-2-kinase family protein	NA	NA	NA	NA	NA
WP_041357416.1|806390_807155_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_041357417.1|807268_807718_-	response regulator	NA	NA	NA	NA	NA
WP_015821250.1|808396_808687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012252511.1|808942_809320_-	VOC family protein	NA	NA	NA	NA	NA
WP_080579849.1|809874_810390_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015821253.1|810457_811858_+	cytochrome P450	NA	A0A2I2L481	Orpheovirus	25.8	4.1e-34
WP_015821254.1|812547_813168_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_076611771.1|813521_814477_-|transposase	IS630-like element ISMdi1 family transposase	transposase	A0A1V0SCG6	Indivirus	19.7	1.1e-09
WP_012252516.1|815197_815455_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003599782.1|817219_817456_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015821258.1|817452_818583_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_015821259.1|818852_819566_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_015821260.1|819565_819826_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015821261.1|819873_820179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003599774.1|820221_820455_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015821262.1|820767_821478_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_015821264.1|822133_822856_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_015821265.1|822943_823180_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015821267.1|823390_824020_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WF93	Clostridium_phage	24.2	8.1e-06
WP_015821268.1|824566_825550_+	formylglycine-generating enzyme family protein	NA	NA	NA	NA	NA
WP_015821274.1|829295_829508_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041357420.1|829826_831701_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_150105696.1|832090_832321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041357421.1|832769_833759_-	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_015821278.1|833863_834748_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_015821280.1|836221_839419_-	PAS domain S-box protein	NA	W8CYM9	Bacillus_phage	24.1	9.2e-05
WP_076611329.1|839687_840442_-|transposase	IS5-like element ISMex15 family transposase	transposase	NA	NA	NA	NA
840452:841288	attR	CCTCACCCGGAAGAAATCACAGGCACACCCGCCAAGCCAAACTTATGGGTCCGGAGCCTAATACCCTAGCCTCTAAGGGGCTTCAGAACGACAATATCGAGTTCCCAGCGTATCACCACTTCCGGCACTGCCTTGCAGATCGGCCGCAGGCAATAGGCGTCGCCATCGAAGGTGTCCTATGCGGCGTGAGGCTGGAGGGTTGGCAAATCGACTGTCCGTTGAGTCTCACCCACCCTCCAGGCTCATTTAGTGCGAGCGTCTCCGGCCGCTGACACACGTTAGCCGGCCTTAACAGGTACTTACGCAACCACAGGCGGGACCATTTGGCAAAAAATCGGTACAAAACTGCCAGATCCCCGCATTCATAGCCTTCCTATCTGATCACGCCTCTGTGATCGTACGCCTCGTCCTTGGGGGAAGAACCTATGAAGTTAAGCGAGCGCCACTTTCTACAAGCGATGTGCATGCGCCATGAGACTTGGATCAACCGGCGCTCTCCTCATGTGGCCGCCGTCATTCACCGCGCAAAGCTCAAGAAGGCATCTTGTTCTAAGTCAAAGAACAAGTCTTTGCCTCACAACGACAATGTTATCGAATTAGCATTGCCTGACAAAACGGGACGATCGCTCTTCGGCAGCGGCGCGCCTCAGCCCAGCGAACTTGGCGCTCAGCTCACCACGGCAATTTTCTAAAAATAATCTTCAACGTCGGGGCGAGTCGCGTACAGAGCCGCCCTCGGCTGGCTCAGGTTCGGGACGATAATGTCGGACCTGCGGTGAGTGATCTCAACCTAAGATGTACCGCCGTGGTCCTACGTGATTTGCTCAAAGCTACCAA	NA	NA	NA	NA
>prophage 2
NC_012988	Methylorubrum extorquens AM1, complete genome	5943768	1141759	1198246	5943768	transposase	uncultured_virus(25.0%)	44	NA	NA
WP_003598648.1|1141759_1142683_-|transposase	IS110-like element ISMex31 family transposase	transposase	NA	NA	NA	NA
WP_085985055.1|1143824_1144785_+|transposase	IS630-like element ISMex30 family transposase	transposase	A0A1V0SCG6	Indivirus	25.5	7.5e-11
WP_003598652.1|1144953_1145121_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041357443.1|1145195_1145408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080515519.1|1145716_1145944_-	cytochrome C biogenesis protein	NA	NA	NA	NA	NA
WP_003598654.1|1146045_1147119_-	murein L,D-transpeptidase	NA	NA	NA	NA	NA
WP_012753610.1|1147207_1147729_-	signal peptidase II	NA	NA	NA	NA	NA
WP_003598656.1|1147725_1149921_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	38.7	3.2e-118
WP_003598658.1|1150021_1150423_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003598660.1|1151099_1153520_-	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.1	2.9e-67
WP_003598662.1|1153587_1154070_-	DUF305 domain-containing protein	NA	A0A218MND9	uncultured_virus	44.0	3.9e-08
WP_015821476.1|1154124_1154457_-	four-helix bundle copper-binding protein	NA	NA	NA	NA	NA
WP_003598665.1|1154636_1155035_-	DUF305 domain-containing protein	NA	A0A218MND9	uncultured_virus	50.7	6.9e-11
WP_003598666.1|1155061_1155427_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003598668.1|1155446_1158596_-	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA	NA
WP_003598670.1|1158609_1160349_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003598673.1|1160994_1161207_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_003598674.1|1161587_1162328_+	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_003598675.1|1162341_1162818_-	metal-binding protein	NA	NA	NA	NA	NA
WP_003598676.1|1162837_1166011_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003598677.1|1166007_1167525_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003598678.1|1167521_1167926_-	FixH family protein	NA	NA	NA	NA	NA
WP_003598679.1|1168007_1168406_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003598680.1|1169201_1169396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003598681.1|1169452_1169674_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173390153.1|1169939_1170299_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003598686.1|1171060_1171492_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050900019.1|1173290_1173860_-	DUF1109 family protein	NA	NA	NA	NA	NA
WP_003599784.1|1176096_1179213_+	alkaline phosphatase	NA	NA	NA	NA	NA
WP_085985056.1|1179441_1180582_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	36.0	6.5e-38
WP_012253152.1|1180768_1181698_+|transposase	IS110-like element ISMex17 family transposase	transposase	Q75QL1	Wolbachia_phage	33.7	2.2e-28
WP_015821487.1|1182097_1182352_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003599790.1|1183588_1185808_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003599791.1|1185811_1187251_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_003599792.1|1187832_1188216_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_003599794.1|1188849_1189830_-	arsenic resistance protein	NA	NA	NA	NA	NA
WP_003599795.1|1189826_1190213_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_041357445.1|1190662_1192351_+	MCP four helix bundle domain-containing protein	NA	NA	NA	NA	NA
WP_015821493.1|1193132_1193879_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	65.7	6.3e-82
WP_003599807.1|1193929_1194289_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003599806.1|1194281_1194809_+	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	43.9	6.9e-27
WP_015821494.1|1194808_1195234_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	63.0	6.6e-44
WP_085985057.1|1195989_1197130_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	36.0	8.5e-38
WP_012253152.1|1197316_1198246_+|transposase	IS110-like element ISMex17 family transposase	transposase	Q75QL1	Wolbachia_phage	33.7	2.2e-28
>prophage 3
NC_012988	Methylorubrum extorquens AM1, complete genome	5943768	1273694	1296317	5943768	integrase,transposase	Leptospira_phage(33.33%)	17	1267482:1267498	1295933:1295949
1267482:1267498	attL	CCACGCCCGGCACCGTC	NA	NA	NA	NA
WP_015821540.1|1273694_1274303_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_015821541.1|1274426_1275095_+	Abi family protein	NA	NA	NA	NA	NA
WP_085985060.1|1276250_1277392_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	36.7	9.4e-37
WP_015821545.1|1278381_1279395_-|transposase	IS110-like element ISMdi14 family transposase	transposase	NA	NA	NA	NA
WP_015821546.1|1279791_1280112_-	DUF736 domain-containing protein	NA	NA	NA	NA	NA
WP_015821548.1|1280609_1282769_-	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_015821549.1|1283120_1284128_-	DUF1738 domain-containing protein	NA	A0A1V0EEV1	Caulobacter_phage	38.1	6.8e-47
WP_041357458.1|1284307_1284523_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015821550.1|1284770_1285856_-|transposase	IS110-like element ISMdi10 family transposase	transposase	NA	NA	NA	NA
WP_015821551.1|1286119_1286362_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158020932.1|1286663_1286960_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015821555.1|1288803_1289829_-|transposase	IS110-like element ISMdi12 family transposase	transposase	A0A1S7J231	Thermus_phage	37.0	9.4e-12
WP_015821557.1|1290481_1290760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015821558.1|1291280_1293413_+	amylo-alpha-1,6-glucosidase	NA	NA	NA	NA	NA
WP_080579857.1|1293489_1293774_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158020932.1|1294531_1294828_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015821561.1|1295177_1296317_+|transposase	IS110-like element ISMdi9 family transposase	transposase	NA	NA	NA	NA
1295933:1295949	attR	GACGGTGCCGGGCGTGG	NA	NA	NA	NA
>prophage 4
NC_012988	Methylorubrum extorquens AM1, complete genome	5943768	1958370	1969881	5943768	protease,tail,head	Paracoccus_phage(33.33%)	13	NA	NA
WP_015822048.1|1958370_1958934_-	lysozyme	NA	W6E9Q2	Rhizobium_phage	41.4	9.1e-25
WP_015822051.1|1960159_1964062_-|tail	glycoside hydrolase/phage tail family protein	tail	A0A0B5A7K5	Paracoccus_phage	35.6	5.6e-190
WP_015822052.1|1964085_1964550_-	peptidase P60	NA	A0A1V0DYB6	Dinoroseobacter_phage	46.1	8.5e-29
WP_015822053.1|1964557_1965451_-	DUF2163 domain-containing protein	NA	A0A0K0PVK1	Roseobacter_phage	41.2	1.9e-56
WP_015822054.1|1965461_1966103_-	DUF2460 domain-containing protein	NA	A0A0B5A2K3	Paracoccus_phage	49.5	1.1e-45
WP_041357584.1|1966114_1966741_-|tail	phage tail tape measure protein	tail	G9JXH3	Shigella_phage	67.4	1.1e-07
WP_015822056.1|1966740_1966971_-|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_041357586.1|1966967_1967294_-	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_041357588.1|1967296_1967707_-|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_015822059.1|1967736_1968156_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_015822060.1|1968152_1968494_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_015822061.1|1968516_1969092_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015822062.1|1969125_1969881_+|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
>prophage 5
NC_012988	Methylorubrum extorquens AM1, complete genome	5943768	2500950	2561211	5943768	integrase,transposase	uncultured_Caudovirales_phage(22.22%)	57	2505735:2505751	2510813:2510829
WP_015822435.1|2500950_2502123_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_015822436.1|2502136_2503225_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015822437.1|2503221_2503659_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_015822438.1|2503655_2503934_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_015822439.1|2504055_2504355_+	hypothetical protein	NA	NA	NA	NA	NA
2505735:2505751	attL	CCTCGTCGCCGAGCTCG	NA	NA	NA	NA
WP_015822441.1|2505900_2507145_-	TniQ family protein	NA	NA	NA	NA	NA
WP_015822442.1|2507141_2508020_-	TniB family NTP-binding protein	NA	NA	NA	NA	NA
WP_015822443.1|2508021_2509680_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_050983370.1|2509820_2510882_+	DUF1612 and helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
2510813:2510829	attR	CCTCGTCGCCGAGCTCG	NA	NA	NA	NA
WP_015822445.1|2510881_2512393_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015822446.1|2512605_2513814_+	ATP-binding protein	NA	A0A1V0SG63	Hokovirus	30.9	4.2e-11
WP_015822447.1|2513803_2516332_+	S8 family peptidase	NA	NA	NA	NA	NA
WP_015822448.1|2516449_2517640_+	abortive infection family protein	NA	NA	NA	NA	NA
WP_015822449.1|2517707_2518358_+	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
WP_015822450.1|2518363_2519320_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041357690.1|2519347_2520814_+	caspase family protein	NA	NA	NA	NA	NA
WP_041357692.1|2520874_2521153_-	DUF2285 domain-containing protein	NA	NA	NA	NA	NA
WP_015822453.1|2521290_2522187_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015822454.1|2522286_2522628_+	type II toxin-antitoxin system PrlF family antitoxin	NA	NA	NA	NA	NA
WP_015822455.1|2522624_2523128_+	type II toxin-antitoxin system YhaV family toxin	NA	NA	NA	NA	NA
WP_158020948.1|2523182_2523386_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015822457.1|2523455_2524157_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080579881.1|2524279_2524519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015822458.1|2524545_2524857_-	DUF736 domain-containing protein	NA	NA	NA	NA	NA
WP_015822460.1|2525899_2527309_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_041358596.1|2527332_2528178_-	hypothetical protein	NA	C8CHK2	Thermus_virus	45.6	2.9e-59
WP_015822462.1|2528210_2529137_-	DUF1738 domain-containing protein	NA	A0A1V0EEV1	Caulobacter_phage	49.8	2.9e-76
WP_015822463.1|2529486_2530074_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015822464.1|2530467_2530794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041357695.1|2530790_2531042_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015822466.1|2531038_2531242_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015822467.1|2531245_2532118_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015822468.1|2532114_2532588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015822469.1|2532674_2534357_-	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_015822470.1|2534607_2539704_-	DEAD/DEAH box helicase family protein	NA	I6NW45	Burkholderia_virus	41.8	0.0e+00
WP_015822471.1|2539808_2540003_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015822472.1|2540019_2540622_-	DUF1419 domain-containing protein	NA	NA	NA	NA	NA
WP_015822473.1|2540913_2541207_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015822474.1|2541238_2541901_-	hypothetical protein	NA	A0A0F6YR75	Sinorhizobium_phage	44.1	5.7e-18
WP_015822475.1|2541940_2543734_-	PcfJ domain-containing protein	NA	NA	NA	NA	NA
WP_015822476.1|2543730_2544162_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015822478.1|2544848_2545142_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015822479.1|2545138_2545552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015822480.1|2545684_2546611_-	toprim domain-containing protein	NA	NA	NA	NA	NA
WP_015822481.1|2546815_2546992_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015822482.1|2547540_2548344_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_085985082.1|2548346_2549150_-	xanthine dehydrogenase	NA	NA	NA	NA	NA
WP_041358600.1|2549172_2549913_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	34.1	1.5e-22
WP_015822485.1|2549905_2550574_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_111772103.1|2550589_2551327_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_015822487.1|2551650_2552604_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_015822488.1|2552811_2553660_-	universal stress protein	NA	A0A2H4J154	uncultured_Caudovirales_phage	41.8	1.6e-49
WP_041357698.1|2553671_2555156_-	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	62.5	1.4e-162
WP_085985065.1|2556693_2557531_+|transposase	IS5-like element ISMdi21 family transposase	transposase	NA	NA	NA	NA
WP_013214472.1|2557644_2558910_-|transposase	IS256-like element IS1354 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	26.7	1.2e-27
WP_085985066.1|2559071_2559909_+|transposase	IS5-like element IS1355 family transposase	transposase	NA	NA	NA	NA
WP_013214745.1|2559975_2561211_+|transposase	IS701-like element IS1357 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NC_012988	Methylorubrum extorquens AM1, complete genome	5943768	4270855	4305780	5943768	integrase,transposase	Indivirus(28.57%)	37	4266424:4266441	4289181:4289198
4266424:4266441	attL	CACGCCTTGGCGCTCGCA	NA	NA	NA	NA
WP_085985069.1|4270855_4271816_+|transposase	IS630 family transposase	transposase	A0A1V0SCG6	Indivirus	24.1	2.3e-12
WP_015823672.1|4273949_4274873_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_076611329.1|4274967_4275721_+|transposase	IS5-like element ISMex15 family transposase	transposase	NA	NA	NA	NA
WP_076611771.1|4275823_4276778_+|transposase	IS630-like element ISMdi1 family transposase	transposase	A0A1V0SCG6	Indivirus	19.7	1.1e-09
WP_041357996.1|4277581_4278157_-	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_041357997.1|4278429_4278660_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015823677.1|4278819_4279302_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017484448.1|4279298_4279487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015823679.1|4279701_4280265_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015823680.1|4280451_4281150_-	TIGR02594 family protein	NA	H6WBN0	Rhodobacter_phage	43.7	4.7e-39
WP_041358001.1|4281681_4282563_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015823684.1|4282758_4283718_+	hypothetical protein	NA	A0A068CCA6	Rhizobium_phage	38.9	5.3e-41
WP_111772148.1|4283692_4284832_-|integrase	tyrosine-type recombinase/integrase	integrase	B4UTU2	Rhizobium_phage	37.4	3.9e-51
WP_158020962.1|4285371_4285965_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015823688.1|4286249_4287056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158020963.1|4287066_4287234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015823690.1|4287230_4288061_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015823691.1|4288060_4288273_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_015823692.1|4288269_4288749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015823693.1|4289034_4289754_+	hypothetical protein	NA	NA	NA	NA	NA
4289181:4289198	attR	TGCGAGCGCCAAGGCGTG	NA	NA	NA	NA
WP_015823694.1|4289750_4290680_+	DNA adenine methylase	NA	A0A0K1LM14	Caulobacter_phage	45.5	1.6e-58
WP_041358003.1|4291117_4292494_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_015823696.1|4292814_4295544_+	N-6 DNA methylase	NA	NA	NA	NA	NA
WP_015823697.1|4295540_4296212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041358004.1|4296850_4297102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358005.1|4297177_4298182_+|transposase	IS481-like element ISMdi4 family transposase	transposase	NA	NA	NA	NA
WP_012252226.1|4298186_4298393_-	DUF2934 domain-containing protein	NA	NA	NA	NA	NA
WP_158020964.1|4298479_4298668_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041358758.1|4298849_4299440_-	DUF1003 domain-containing protein	NA	NA	NA	NA	NA
WP_041358007.1|4299451_4299676_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012778891.1|4300684_4300897_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012778892.1|4301093_4301471_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041358008.1|4302096_4302489_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015823707.1|4302800_4303109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158020965.1|4303179_4303542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158020966.1|4304137_4304380_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085985070.1|4304680_4305780_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.4	1.0e-51
>prophage 1
NC_012987	Methylorubrum extorquens AM1 plasmid p1METDI, complete sequence	141504	12843	66825	141504	transposase,integrase	Escherichia_phage(26.67%)	41	2950:2966	68189:68205
2950:2966	attL	GGCCCGCACCGCGGCCG	NA	NA	NA	NA
WP_012778770.1|12843_14343_+|transposase	IS21-like element ISMdi7 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	28.1	1.3e-17
WP_003596510.1|14339_15182_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	38.3	3.3e-39
WP_050983430.1|15317_15797_+	TniB family NTP-binding protein	NA	NA	NA	NA	NA
WP_158020992.1|15891_16632_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012778771.1|16628_18164_-|transposase	ISL3-like element ISMdi2 family transposase	transposase	NA	NA	NA	NA
WP_009867550.1|18597_19866_-|transposase	IS256-like element ISMex3 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	45.7	2.5e-91
WP_085985084.1|19973_21114_+|transposase	IS3-like element ISMex5 family transposase	transposase	S5WIU1	Leptospira_phage	32.4	7.0e-32
WP_012778773.1|22670_23045_+	DUF485 domain-containing protein	NA	NA	NA	NA	NA
WP_012778774.1|23041_24733_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_012778776.1|27579_28797_+	FIST C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_012778777.1|29292_30546_+	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	41.2	1.9e-86
WP_012778778.1|30565_31993_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_085985085.1|32295_33100_+|transposase	IS5-like element ISMdi24 family transposase	transposase	NA	NA	NA	NA
WP_012778779.1|33124_34303_+	CHAT domain-containing protein	NA	NA	NA	NA	NA
WP_173390191.1|34431_35832_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	33.3	1.3e-27
WP_012778781.1|37077_38136_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	49.4	2.4e-87
WP_012778782.1|38153_39044_+	dTDP-4-dehydrorhamnose reductase	NA	A0A1D7XFA3	Escherichia_phage	34.4	1.4e-24
WP_012778783.1|39059_39950_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	55.6	2.1e-92
WP_080579950.1|40064_41210_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_080579951.1|41209_42529_+	glycosyltransferase	NA	A0A2P1ELT8	Moumouvirus	23.9	9.0e-07
WP_158020993.1|42586_43543_+	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
WP_158020994.1|43535_44177_+	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_050983432.1|44157_44577_+	WxcM-like domain-containing protein	NA	NA	NA	NA	NA
WP_041359143.1|44576_45692_+	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	E5ES42	Bathycoccus_sp._RCC1105_virus	35.1	7.3e-50
WP_041359080.1|47354_48806_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012778786.1|48954_50313_+|transposase	IS701-like element ISMdi28 family transposase	transposase	NA	NA	NA	NA
WP_041359084.1|50991_51723_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	37.3	1.9e-30
WP_012778788.1|51722_53222_-|transposase	IS21-like element ISMdi27 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	24.2	1.1e-11
WP_158020995.1|54263_55397_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_158020996.1|57032_57839_-	sulfotransferase	NA	NA	NA	NA	NA
WP_158020997.1|58099_58909_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012778789.1|60182_60542_-	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA	NA
WP_012778790.1|60923_61985_-|integrase	tyrosine-type recombinase/integrase	integrase	Q5QBN6	Enterobacteria_phage	28.3	1.8e-21
WP_080579955.1|62173_62473_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_111772158.1|62462_62855_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_162129466.1|63284_64172_+	metallo-hydrolase/oxidoreductase	NA	NA	NA	NA	NA
WP_012778793.1|64185_64653_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158020999.1|64730_65003_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	Q9ZXG3	Shigella_phage	61.5	9.7e-25
WP_158021000.1|65021_65360_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158021001.1|65756_65915_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_012778795.1|65865_66825_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
68189:68205	attR	CGGCCGCGGTGCGGGCC	NA	NA	NA	NA
>prophage 2
NC_012987	Methylorubrum extorquens AM1 plasmid p1METDI, complete sequence	141504	75726	94082	141504	transposase	Acinetobacter_phage(16.67%)	16	NA	NA
WP_085985087.1|75726_76910_-|transposase	IS3-like element ISMdi5 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	43.6	1.5e-53
WP_012778804.1|77046_78372_-	polyhydroxyalkanoate depolymerase	NA	NA	NA	NA	NA
WP_012778805.1|78695_79139_+	phasin	NA	NA	NA	NA	NA
WP_085985089.1|79629_80800_+|transposase	IS3-like element ISMdi16 family transposase	transposase	S5WIU1	Leptospira_phage	36.8	1.8e-38
WP_158021002.1|80917_81496_+	hypothetical protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	50.6	2.7e-08
WP_041359162.1|81577_82387_-|transposase	IS5-like element ISMdi26 family transposase	transposase	NA	NA	NA	NA
WP_158021003.1|82411_82636_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158021004.1|82719_82956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012778808.1|83072_83951_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012778809.1|84122_85061_+	EamA family transporter	NA	NA	NA	NA	NA
WP_012778810.1|85090_86107_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_076611539.1|86855_88207_-|transposase	IS3-like element ISMex16 family transposase	transposase	Q6J1X2	Lactobacillus_phage	25.5	2.6e-09
WP_041359169.1|89813_91289_+	diguanylate cyclase	NA	G3MA91	Bacillus_virus	28.6	2.0e-10
WP_158021005.1|91480_92236_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012778812.1|92417_93428_+|transposase	IS110-like element ISMex29 family transposase	transposase	A0A1S7J231	Thermus_phage	29.0	9.9e-14
WP_080579959.1|93590_94082_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
