The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_013722	Xanthomonas albilineans GPE PC73, complete genome	3768695	230790	271644	3768695	portal,capsid,head,integrase,terminase,tail	Pseudomonas_phage(31.82%)	52	249062:249077	276127:276142
WP_045756658.1|230790_231309_-	hypothetical protein	NA	A0A076FRD7	Pseudomonas_phage	29.5	1.1e-08
WP_012914757.1|231510_231744_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012914758.1|231936_232464_+	hypothetical protein	NA	B7SYH6	Stenotrophomonas_phage	48.2	1.7e-36
WP_012914759.1|232465_232681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045756660.1|232677_233022_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914761.1|233258_235727_+	toprim domain-containing protein	NA	B7SYD0	Stenotrophomonas_phage	51.1	1.4e-239
WP_012914762.1|236083_236710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_155393622.1|236782_236941_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045756661.1|236942_237311_+	hypothetical protein	NA	Q3HQV8	Burkholderia_phage	58.1	3.3e-07
WP_045756662.1|237307_237589_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914765.1|237585_238029_+	DNA methyltransferase	NA	W0LI41	Edwardsiella_phage	40.9	2.1e-16
WP_155393623.1|238025_238259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045756663.1|238372_239617_+	DNA cytosine methyltransferase	NA	Q6V7R9	Burkholderia_virus	40.0	4.2e-54
WP_155393624.1|239613_240066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914768.1|240062_240320_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080931542.1|240325_242512_+|terminase	phage terminase large subunit family protein	terminase	B7SYD3	Stenotrophomonas_phage	56.6	1.2e-210
WP_012914770.1|242524_242878_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914771.1|243007_243223_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914772.1|243224_244853_+|portal	phage portal protein	portal	A0A067ZJA4	Vibrio_phage	39.8	6.0e-85
WP_012914773.1|244849_246151_+	S49 family peptidase	NA	A0A219YAK4	Aeromonas_phage	41.9	3.9e-63
WP_012914774.1|246160_246526_+|head	head decoration protein	head	NA	NA	NA	NA
WP_045757145.1|246552_247578_+|capsid	major capsid protein	capsid	A0A2H4J890	uncultured_Caudovirales_phage	37.6	2.5e-52
WP_155393625.1|247678_247960_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914777.1|247956_248337_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049887157.1|248339_249155_+	hypothetical protein	NA	V5Q8V7	Xylella_phage	49.7	1.1e-42
249062:249077	attL	GCAATTGCGCGCGCAG	NA	NA	NA	NA
WP_012914779.1|249210_249657_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914780.1|249658_249952_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914781.1|249948_250260_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914782.1|250252_250687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914783.1|250683_251298_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914784.1|251294_251483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914785.1|251523_252282_+	hypothetical protein	NA	Q5ZQX2	Pseudomonas_phage	46.5	1.1e-52
WP_155393846.1|252363_252804_+	hypothetical protein	NA	Q5ZQX1	Pseudomonas_phage	35.2	4.2e-09
WP_012914787.1|252931_256642_+|tail	phage tail length tape measure family protein	tail	A0A0S4L7E6	Pseudomonas_phage	31.7	2.1e-16
WP_012914788.1|256641_257565_+	hypothetical protein	NA	A0A2D1GMZ0	Marinobacter_phage	32.1	4.6e-34
WP_012914789.1|257564_258473_+	hypothetical protein	NA	A0A0A1IVS5	Pseudomonas_phage	27.3	8.1e-07
WP_012914790.1|258469_260173_+	hypothetical protein	NA	L7P813	Pseudomonas_phage	47.2	5.0e-127
WP_012914791.1|260169_260997_+	phage BR0599 family protein	NA	Q6UYJ5	Burkholderia_phage	34.4	3.0e-40
WP_012914792.1|260996_263471_+	hypothetical protein	NA	J9RWA5	Pseudomonas_phage	40.0	1.1e-151
WP_012914793.1|263473_264292_+	hypothetical protein	NA	A0A1I9L2F4	Xanthomonas_phage	31.5	1.1e-15
WP_012914794.1|264349_265141_+	DNA adenine methylase	NA	B7SYF3	Stenotrophomonas_phage	74.2	2.9e-117
WP_012914795.1|265339_265717_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914796.1|265709_266282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045756667.1|266278_266866_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_012914798.1|266862_267306_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914799.1|267439_267883_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914800.1|268038_268413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914801.1|268412_268703_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914802.1|268728_269193_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012914803.1|269219_269699_+	hypothetical protein	NA	NA	NA	NA	NA
WP_155393725.1|270142_270520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045757151.1|270639_271644_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1GMX8	Marinobacter_phage	42.7	1.2e-67
276127:276142	attR	CTGCGCGCGCAATTGC	NA	NA	NA	NA
>prophage 2
NC_013722	Xanthomonas albilineans GPE PC73, complete genome	3768695	1785832	1795818	3768695	coat	Xanthomonas_phage(75.0%)	12	NA	NA
WP_045756851.1|1785832_1788517_+	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	30.9	2.7e-50
WP_161525142.1|1788690_1789086_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_045756853.1|1789498_1789852_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080928201.1|1790049_1790370_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045756854.1|1790322_1790988_-	conjugal transfer protein	NA	A0A077JBM8	Xanthomonas_phage	55.6	8.7e-59
WP_012916043.1|1790987_1792169_-	hypothetical protein	NA	A0A1W6DXR3	Xanthomonas_phage	62.3	1.7e-129
WP_012916044.1|1792168_1792495_-	DUF2523 domain-containing protein	NA	A0A1D6ZIU0	Xanthomonas_phage	76.1	1.5e-40
WP_146084103.1|1792494_1793859_-	hypothetical protein	NA	A0A1D6ZIU5	Xanthomonas_phage	50.0	1.2e-62
WP_012916047.1|1794002_1794221_-|coat	phage coat protein	coat	A0A1D6ZIT7	Xanthomonas_phage	62.7	2.4e-10
WP_012916048.1|1794231_1794435_-	hypothetical protein	NA	A0A1D6ZIU2	Xanthomonas_phage	77.6	1.5e-22
WP_012916049.1|1794451_1794751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012916050.1|1794738_1795818_-	replication initiation factor domain-containing protein	NA	S0F3F7	Stenotrophomonas_phage	44.0	5.0e-72
>prophage 3
NC_013722	Xanthomonas albilineans GPE PC73, complete genome	3768695	2842254	2850926	3768695		Acidithiobacillus_phage(100.0%)	13	NA	NA
WP_012916858.1|2842254_2842626_-	hypothetical protein	NA	K4HZX2	Acidithiobacillus_phage	59.7	4.6e-33
WP_012916859.1|2842625_2844014_-	recombinase family protein	NA	K4ICM1	Acidithiobacillus_phage	82.4	6.0e-219
WP_012916860.1|2844010_2844463_-	DUF2924 domain-containing protein	NA	K4I3X1	Acidithiobacillus_phage	74.5	2.2e-58
WP_012916861.1|2844459_2844651_-	hypothetical protein	NA	K4HZ94	Acidithiobacillus_phage	63.9	2.4e-09
WP_045756974.1|2844744_2844990_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012916862.1|2845053_2845317_+	hypothetical protein	NA	K4I3X3	Acidithiobacillus_phage	85.3	1.9e-25
WP_012916863.1|2845430_2845706_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045756975.1|2845708_2845960_+	hypothetical protein	NA	K4I1D6	Acidithiobacillus_phage	68.1	4.8e-18
WP_012916865.1|2845956_2848221_+	hypothetical protein	NA	K4HZY1	Acidithiobacillus_phage	72.1	0.0e+00
WP_012916866.1|2848365_2848830_+	hypothetical protein	NA	K4ICN3	Acidithiobacillus_phage	70.6	1.8e-58
WP_012916867.1|2848834_2849038_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012916868.1|2849030_2849459_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045756976.1|2849669_2850926_+	site-specific DNA-methyltransferase	NA	K4HZA5	Acidithiobacillus_phage	68.3	1.8e-161
>prophage 4
NC_013722	Xanthomonas albilineans GPE PC73, complete genome	3768695	3047888	3118673	3768695	protease,transposase,terminase	Acidithiobacillus_phage(46.67%)	60	NA	NA
WP_155393200.1|3047888_3049232_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A2H5BJT2	Erwinia_phage	29.5	4.6e-43
WP_012917048.1|3049440_3049992_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_012917049.1|3050332_3051223_-	tyrosine recombinase XerC	NA	A0A2D1G8E2	Mycobacterium_phage	33.5	1.6e-15
WP_012917050.1|3051303_3051969_-	DUF484 family protein	NA	NA	NA	NA	NA
WP_012917051.1|3051965_3052826_-	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_045757003.1|3052812_3053052_-	lipoprotein	NA	NA	NA	NA	NA
WP_012917052.1|3053257_3055339_-	oligopeptidase B	NA	F2Y2Z7	Organic_Lake_phycodnavirus	26.2	4.4e-32
WP_012917053.1|3055535_3056747_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_012917054.1|3056883_3058995_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_012917055.1|3059062_3059353_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012917056.1|3059478_3060066_+	lipocalin family protein	NA	NA	NA	NA	NA
WP_045757005.1|3060224_3060587_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_012917058.1|3060620_3061592_-	YafY family transcriptional regulator	NA	NA	NA	NA	NA
WP_012917059.1|3061770_3062556_+	DUF481 domain-containing protein	NA	NA	NA	NA	NA
WP_012917060.1|3062646_3063555_-	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
WP_012917061.1|3063613_3064339_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_012917062.1|3064442_3065108_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_012917063.1|3065146_3067078_-	glucans biosynthesis glucosyltransferase MdoH	NA	NA	NA	NA	NA
WP_012917064.1|3067417_3068716_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_045757006.1|3068833_3069211_+	response regulator	NA	NA	NA	NA	NA
WP_045757007.1|3069668_3071273_+	glycogen synthase GlgA	NA	NA	NA	NA	NA
WP_012917066.1|3071370_3073164_+	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
WP_012917067.1|3073324_3075301_+	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
WP_012917068.1|3075297_3077919_+	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
WP_012917069.1|3077933_3078131_+	DUF2934 domain-containing protein	NA	NA	NA	NA	NA
WP_012917070.1|3078143_3080312_+	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_012917071.1|3080519_3081272_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012917072.1|3081458_3082796_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_012917073.1|3082780_3084217_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_155393146.1|3084329_3084488_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012917074.1|3084572_3085697_-	acyl-CoA desaturase	NA	NA	NA	NA	NA
WP_012917075.1|3085708_3086785_-	ferredoxin reductase	NA	NA	NA	NA	NA
WP_012917076.1|3086879_3087524_+	HTH-type transcriptional repressor FabR	NA	NA	NA	NA	NA
WP_155393649.1|3087824_3088630_-|transposase	IS5 family transposase	transposase	A0A0M5M147	Mycobacterium_phage	33.9	2.5e-28
WP_155393694.1|3088689_3089106_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045757010.1|3089530_3090961_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_012917082.1|3092946_3098865_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012917083.1|3099189_3100002_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012917084.1|3100377_3101310_-	RDD family protein	NA	NA	NA	NA	NA
WP_012917085.1|3101433_3101802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012917086.1|3101806_3103501_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA	NA
WP_012917087.1|3103604_3105953_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012917088.1|3105949_3106807_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012917089.1|3107140_3107668_-	hypothetical protein	NA	K4I1C7	Acidithiobacillus_phage	46.5	1.5e-29
WP_012917090.1|3107664_3108036_-	hypothetical protein	NA	K4HZX2	Acidithiobacillus_phage	59.7	4.6e-33
WP_012917091.1|3108035_3109424_-	recombinase family protein	NA	K4ICM1	Acidithiobacillus_phage	81.7	2.8e-216
WP_012917092.1|3109420_3109873_-	DUF2924 domain-containing protein	NA	K4I3X1	Acidithiobacillus_phage	73.1	5.5e-57
WP_012917093.1|3109869_3110061_-	hypothetical protein	NA	K4HZ94	Acidithiobacillus_phage	62.3	2.0e-08
WP_045757014.1|3110133_3110508_+	hypothetical protein	NA	NA	NA	NA	NA
WP_155393695.1|3111172_3111322_+	hypothetical protein	NA	K4ICN3	Acidithiobacillus_phage	75.5	3.6e-13
WP_012916802.1|3111382_3111676_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_012917096.1|3111720_3112533_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.1	7.6e-41
WP_012917098.1|3112898_3113102_+	hypothetical protein	NA	NA	NA	NA	NA
WP_187388453.1|3113079_3113523_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_012917100.1|3113733_3114990_+	site-specific DNA-methyltransferase	NA	K4HZA5	Acidithiobacillus_phage	68.3	1.4e-161
WP_012917101.1|3115104_3115368_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045764710.1|3115526_3115997_-	DUF3489 domain-containing protein	NA	A0A2H4JE21	uncultured_Caudovirales_phage	63.1	3.1e-26
WP_012916872.1|3116104_3116470_+	HNH endonuclease	NA	Q8W6N0	Burkholderia_virus	53.0	2.2e-32
WP_012917103.1|3116927_3117392_+|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
WP_155393589.1|3117441_3118673_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	81.8	1.6e-130
>prophage 5
NC_013722	Xanthomonas albilineans GPE PC73, complete genome	3768695	3191142	3201245	3768695		Escherichia_phage(28.57%)	10	NA	NA
WP_012917162.1|3191142_3192489_+	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	26.9	7.7e-30
WP_012917163.1|3192544_3193948_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	28.5	1.1e-42
WP_012917164.1|3194022_3194937_-	dTDP-4-dehydrorhamnose reductase	NA	A0A1D7XFA3	Escherichia_phage	33.2	1.6e-26
WP_012917165.1|3194933_3195491_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.9	5.6e-43
WP_012917166.1|3195487_3196375_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	57.4	3.6e-92
WP_012917167.1|3196436_3197492_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	47.9	3.6e-83
WP_012917168.1|3197728_3198475_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_012917169.1|3198474_3199416_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_012917170.1|3199591_3200290_+	hypothetical protein	NA	NA	NA	NA	NA
WP_155393697.1|3200267_3201245_+	glycosyltransferase	NA	B9UDL7	Salmonella_phage	26.0	8.7e-23
>prophage 6
NC_013722	Xanthomonas albilineans GPE PC73, complete genome	3768695	3277745	3284878	3768695		Escherichia_phage(16.67%)	10	NA	NA
WP_012917236.1|3277745_3278657_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	A0A0A0YRJ8	Escherichia_phage	36.2	9.0e-06
WP_012917237.1|3278678_3279188_-	dihydrofolate reductase	NA	A0A1B2IBQ4	Erwinia_phage	43.2	2.4e-24
WP_045757027.1|3279175_3279526_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012917238.1|3279522_3280317_-	thymidylate synthase	NA	A6M9A2	Geobacillus_virus	66.3	5.3e-103
WP_012917239.1|3280313_3281192_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_012917240.1|3281373_3282120_-	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	43.9	4.6e-40
WP_012917241.1|3282159_3282540_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_162596417.1|3282442_3282739_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045757405.1|3282775_3284056_-	HAMP domain-containing histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	28.2	2.0e-11
WP_012917243.1|3284164_3284878_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.2	1.9e-27
