assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000092565.1_ASM9256v1	NC_004342	Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	1	1347143-1347585	1	CRISPRCasFinder	no		WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Orphan	TTCCTAAAGAAATCGGAAAACTAC	24	0	0	NA	NA	NA	6	6	Orphan	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|70aa|up_7|NC_004342.2_1337367_1337577_+,NA|64aa|up_2|NC_004342.2_1343518_1343710_+,NA|60aa|down_0|NC_004342.2_1347782_1347962_+	NA|310aa|up_9|NC_004342.2_1334996_1335926_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|289aa|up_8|NC_004342.2_1336234_1337101_-	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only]	NA|70aa|up_7|NC_004342.2_1337367_1337577_+	NA	NA|236aa|up_6|NC_004342.2_1337911_1338619_+	cd07983, LPLAT_DUF374-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374	NA|620aa|up_5|NC_004342.2_1338951_1340811_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|152aa|up_4|NC_004342.2_1341050_1341506_-	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains	NA|463aa|up_3|NC_004342.2_1341498_1342887_-	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms]	NA|64aa|up_2|NC_004342.2_1343518_1343710_+	NA	NA|288aa|up_1|NC_004342.2_1343769_1344633_-	pfam13489, Methyltransf_23, Methyltransferase domain	NA|343aa|up_0|NC_004342.2_1344719_1345748_+	cd07381, MPP_CapA, CapA and related proteins, metallophosphatase domain	NA|60aa|down_0|NC_004342.2_1347782_1347962_+	NA	NA|704aa|down_1|NC_004342.2_1348280_1350392_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|388aa|down_2|NC_004342.2_1350393_1351557_+	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|219aa|down_3|NC_004342.2_1352180_1352837_+	sd00045, ANK, ankyrin repeats	NA|151aa|down_4|NC_004342.2_1353314_1353767_+	cd07814, SRPBCC_CalC_Aha1-like, Putative hydrophobic ligand-binding SRPBCC domain of Micromonospora echinospora CalC, human Aha1, and related proteins	NA|358aa|down_5|NC_004342.2_1354826_1355900_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|172aa|down_6|NC_004342.2_1356119_1356635_+	pfam08877, MepB, MepB protein	NA|399aa|down_7|NC_004342.2_1356808_1358005_+	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|124aa|down_8|NC_004342.2_1358011_1358383_+	pfam02410, RsfS, Ribosomal silencing factor during starvation	NA|511aa|down_9|NC_004342.2_1358418_1359951_+	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane]
GCF_000092565.1_ASM9256v1	NC_004342	Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	2	2269996-2270086	2	CRISPRCasFinder	no		WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Orphan	TGAACTCAATGCATCACTTCCTA	23	0	0	NA	NA	NA	1	1	Orphan	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|209aa|up_8|NC_004342.2_2261611_2262238_+,NA|244aa|up_7|NC_004342.2_2262268_2263000_+,NA|103aa|up_5|NC_004342.2_2263975_2264284_+,NA|100aa|up_0|NC_004342.2_2269618_2269918_+,NA|89aa|down_4|NC_004342.2_2276813_2277080_-	NA|512aa|up_9|NC_004342.2_2260073_2261609_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|209aa|up_8|NC_004342.2_2261611_2262238_+	NA	NA|244aa|up_7|NC_004342.2_2262268_2263000_+	NA	NA|215aa|up_6|NC_004342.2_2263179_2263824_+	PRK01362, PRK01362, fructose-6-phosphate aldolase	NA|103aa|up_5|NC_004342.2_2263975_2264284_+	NA	NA|349aa|up_4|NC_004342.2_2265410_2266457_-	pfam07611, DUF1574, Protein of unknown function (DUF1574)	NA|473aa|up_3|NC_004342.2_2266470_2267889_-	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane]	NA|247aa|up_2|NC_004342.2_2267885_2268626_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|302aa|up_1|NC_004342.2_2268725_2269631_+	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|100aa|up_0|NC_004342.2_2269618_2269918_+	NA	NA|358aa|down_0|NC_004342.2_2270436_2271510_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|389aa|down_1|NC_004342.2_2272542_2273709_-	NF033165, lipo_LipL45, lipoprotein LipL45	NA|445aa|down_2|NC_004342.2_2273808_2275143_-	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase	NA|437aa|down_3|NC_004342.2_2275383_2276694_+	TIGR04043, hypothetical_protein_WH5701_02349, radical SAM protein, MSMEG_0568 family	NA|89aa|down_4|NC_004342.2_2276813_2277080_-	NA	NA|366aa|down_5|NC_004342.2_2277563_2278661_+	COG4335, COG4335, DNA alkylation repair enzyme [DNA replication, recombination, and repair]	NA|227aa|down_6|NC_004342.2_2278986_2279667_-	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|225aa|down_7|NC_004342.2_2279679_2280354_-	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|222aa|down_8|NC_004342.2_2280369_2281035_-	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|223aa|down_9|NC_004342.2_2281117_2281786_+	cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs
GCF_000092565.1_ASM9256v1	NC_004342	Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	3	2415309-2415408	3	CRISPRCasFinder	no		WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Orphan	TTAGTGGTAGTTCCTACATTTTAG	24	0	0	NA	NA	NA	1	1	Orphan	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|113aa|up_8|NC_004342.2_2402167_2402506_+,NA|103aa|up_3|NC_004342.2_2410218_2410527_-,NA|227aa|up_2|NC_004342.2_2410816_2411497_+,NA|145aa|down_7|NC_004342.2_2431165_2431600_+	NA|348aa|up_9|NC_004342.2_2400706_2401750_+	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB	NA|113aa|up_8|NC_004342.2_2402167_2402506_+	NA	NA|915aa|up_7|NC_004342.2_2402579_2405324_-	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|551aa|up_6|NC_004342.2_2405330_2406983_-	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|110aa|up_5|NC_004342.2_2407074_2407404_-	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|939aa|up_4|NC_004342.2_2407387_2410204_-	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|103aa|up_3|NC_004342.2_2410218_2410527_-	NA	NA|227aa|up_2|NC_004342.2_2410816_2411497_+	NA	NA|179aa|up_1|NC_004342.2_2411499_2412036_+	PRK12846, PRK12846, peptide deformylase; Reviewed	NA|1081aa|up_0|NC_004342.2_2412055_2415298_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|361aa|down_0|NC_004342.2_2415449_2416532_-	pfam03929, PepSY_TM, PepSY-associated TM region	NA|501aa|down_1|NC_004342.2_2420415_2421918_-	PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional	NA|324aa|down_2|NC_004342.2_2422083_2423055_-	TIGR04327, hypothetical_protein_LlicsVM_10020, outer membrane protein, LA_2444/LA_4059 family	NA|429aa|down_3|NC_004342.2_2425400_2426687_-	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|634aa|down_4|NC_004342.2_2426896_2428798_-	PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional	NA|282aa|down_5|NC_004342.2_2429007_2429853_-	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|313aa|down_6|NC_004342.2_2430206_2431145_-	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|145aa|down_7|NC_004342.2_2431165_2431600_+	NA	NA|306aa|down_8|NC_004342.2_2432605_2433523_-	COG3766, COG3766, Predicted membrane protein [Function unknown]	NA|253aa|down_9|NC_004342.2_2433533_2434292_-	PRK05716, PRK05716, methionine aminopeptidase; Validated
GCF_000092565.1_ASM9256v1	NC_004342	Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	4	2677849-2677942	4	CRISPRCasFinder	no		WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Orphan	AAAACTCAACACAACGCTTTCCT	23	1	2	2677872-2677919|2677872-2677919	NC_004342.2_2711096-2711049|NC_004342.2_2711167-2711120	NA	1	1	Orphan	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_9|NC_004342.2_2668795_2669347_-,NA|160aa|up_8|NC_004342.2_2669432_2669912_-,NA|135aa|down_7|NC_004342.2_2685422_2685827_-,NA|54aa|down_9|NC_004342.2_2688019_2688181_-	NA|184aa|up_9|NC_004342.2_2668795_2669347_-	NA	NA|160aa|up_8|NC_004342.2_2669432_2669912_-	NA	NA|176aa|up_7|NC_004342.2_2669978_2670506_-	pfam07693, KAP_NTPase, KAP family P-loop domain	NA|114aa|up_6|NC_004342.2_2670550_2670892_-	pfam07600, DUF1564, Protein of unknown function (DUF1564)	NA|430aa|up_5|NC_004342.2_2671243_2672533_-	cd01087, Prolidase, Prolidase	NA|344aa|up_4|NC_004342.2_2672529_2673561_-	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins	NA|373aa|up_3|NC_004342.2_2673574_2674693_-	cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2  has multiple roles in intracellular lipid circulation and metabolism	NA|156aa|up_2|NC_004342.2_2674839_2675307_+	cd00907, Bacterioferritin, Bacterioferritin, ferritin-like diiron-binding domain	NA|417aa|up_1|NC_004342.2_2675303_2676554_+	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA|371aa|up_0|NC_004342.2_2676569_2677682_+	PRK04531, PRK04531, acetylglutamate kinase; Provisional	NA|115aa|down_0|NC_004342.2_2679097_2679442_+	pfam04134, DUF393, Protein of unknown function, DUF393	NA|229aa|down_1|NC_004342.2_2679418_2680105_-	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme	NA|375aa|down_2|NC_004342.2_2680117_2681242_-	TIGR01205, D-alanine--D-alanine_ligase, D-alanine--D-alanine ligase	NA|417aa|down_3|NC_004342.2_2681234_2682485_-	COG1509, KamA, Lysine 2,3-aminomutase [Amino acid transport and metabolism]	NA|225aa|down_4|NC_004342.2_2682568_2683243_+	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|270aa|down_5|NC_004342.2_2683286_2684096_+	smart00909, Germane, Sporulation and spore germination	NA|410aa|down_6|NC_004342.2_2684209_2685439_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|135aa|down_7|NC_004342.2_2685422_2685827_-	NA	NA|368aa|down_8|NC_004342.2_2686650_2687754_-	TIGR03699, menaquin_MqnC, dehypoxanthine futalosine cyclase	NA|54aa|down_9|NC_004342.2_2688019_2688181_-	NA
GCF_000092565.1_ASM9256v1	NC_004342	Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	5	3145771-3145866	5	CRISPRCasFinder	no	cas6,cas1,cas2	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	AGGAAAGCGTTGTGTTGAGTTTTCC	25	1	2	3145796-3145841|3145796-3145841	NC_004342.2_2711051-2711096|NC_004342.2_2711122-2711167	NA	1	1	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|111aa|up_9|NC_004342.2_3132512_3132845_+,NA|78aa|up_2|NC_004342.2_3142487_3142721_-,NA|80aa|up_1|NC_004342.2_3142710_3142950_-,NA|28aa|down_1|NC_004342.2_3147522_3147606_-,NA|184aa|down_7|NC_004342.2_3156932_3157484_+,NA|129aa|down_8|NC_004342.2_3157826_3158213_+,NA|71aa|down_9|NC_004342.2_3158396_3158609_-	NA|111aa|up_9|NC_004342.2_3132512_3132845_+	NA	NA|778aa|up_8|NC_004342.2_3132890_3135224_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|125aa|up_7|NC_004342.2_3135234_3135609_+	PHA03334, PHA03334, putative DNA polymerase catalytic subunit; Provisional	NA|179aa|up_6|NC_004342.2_3136152_3136689_-	pfam07600, DUF1564, Protein of unknown function (DUF1564)	NA|171aa|up_5|NC_004342.2_3138602_3139115_+	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease	NA|456aa|up_4|NC_004342.2_3139467_3140835_+	pfam00743, FMO-like, Flavin-binding monooxygenase-like	NA|338aa|up_3|NC_004342.2_3141259_3142273_-	cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|78aa|up_2|NC_004342.2_3142487_3142721_-	NA	NA|80aa|up_1|NC_004342.2_3142710_3142950_-	NA	NA|664aa|up_0|NC_004342.2_3143059_3145051_+	PRK02048, PRK02048, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional	NA|222aa|down_0|NC_004342.2_3146621_3147287_-	COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown]	NA|28aa|down_1|NC_004342.2_3147522_3147606_-	NA	NA|298aa|down_2|NC_004342.2_3147587_3148481_-	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain	NA|358aa|down_3|NC_004342.2_3148486_3149560_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|589aa|down_4|NC_004342.2_3150302_3152069_+	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|279aa|down_5|NC_004342.2_3153295_3154132_+	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins	NA|499aa|down_6|NC_004342.2_3154497_3155994_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|down_7|NC_004342.2_3156932_3157484_+	NA	NA|129aa|down_8|NC_004342.2_3157826_3158213_+	NA	NA|71aa|down_9|NC_004342.2_3158396_3158609_-	NA
GCF_000092565.1_ASM9256v1	NC_004342	Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	6	3163253-3163502	1,1,6	PILER-CR,CRT,CRISPRCasFinder	no	cas6,cas1,cas2,cas3,cas8b3,cas7,cas5	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	TCTGAATATAACTTTGATGCCGTTAGGCGTTGAGCACAC,TCTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC,CTGAATATAACTTTGATGCCGTTAGGCG	39,37,28	0	0	NA	NA	I-A,I-B,II-B:I-A,I-B,II-B:I-A,I-B,II-B	2,3,3	3	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_8|NC_004342.2_3156932_3157484_+,NA|129aa|up_7|NC_004342.2_3157826_3158213_+,NA|71aa|up_6|NC_004342.2_3158396_3158609_-,NA|99aa|up_4|NC_004342.2_3159897_3160194_+,NA|69aa|up_0|NC_004342.2_3163004_3163211_-,NA|74aa|down_5|NC_004342.2_3173425_3173647_-,NA|61aa|down_8|NC_004342.2_3175999_3176182_-	NA|499aa|up_9|NC_004342.2_3154497_3155994_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|up_8|NC_004342.2_3156932_3157484_+	NA	NA|129aa|up_7|NC_004342.2_3157826_3158213_+	NA	NA|71aa|up_6|NC_004342.2_3158396_3158609_-	NA	NA|292aa|up_5|NC_004342.2_3158870_3159746_+	pfam14284, PcfJ, PcfJ-like protein	NA|99aa|up_4|NC_004342.2_3159897_3160194_+	NA	cas6|70aa|up_3|NC_004342.2_3160269_3160479_+	pfam09559, Cas6, Cas6 Crispr	cas1|542aa|up_2|NC_004342.2_3160978_3162604_+	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas2|95aa|up_1|NC_004342.2_3162603_3162888_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|69aa|up_0|NC_004342.2_3163004_3163211_-	NA	cas6|211aa|down_0|NC_004342.2_3166680_3167313_+	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cas3|753aa|down_1|NC_004342.2_3167309_3169568_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas8b3|628aa|down_2|NC_004342.2_3169569_3171453_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|280aa|down_3|NC_004342.2_3171517_3172357_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|208aa|down_4|NC_004342.2_3172377_3173001_+	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	NA|74aa|down_5|NC_004342.2_3173425_3173647_-	NA	NA|358aa|down_6|NC_004342.2_3174203_3175277_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|143aa|down_7|NC_004342.2_3175578_3176007_+	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_8|NC_004342.2_3175999_3176182_-	NA	NA|514aa|down_9|NC_004342.2_3176356_3177898_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)
GCF_000092565.1_ASM9256v1	NC_004342	Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	7	3163660-3163980	2,2,7	CRT,PILER-CR,CRISPRCasFinder	no	cas6,cas1,cas2,cas3,cas8b3,cas7,cas5	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC,CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC,CTGAATATAACTTTGATGCCGTTAGGCG	36,36,28	0	0	NA	NA	I-A,I-B,II-B:I-A,I-B,II-B:I-A,I-B,II-B	4,2,3	4	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_8|NC_004342.2_3156932_3157484_+,NA|129aa|up_7|NC_004342.2_3157826_3158213_+,NA|71aa|up_6|NC_004342.2_3158396_3158609_-,NA|99aa|up_4|NC_004342.2_3159897_3160194_+,NA|69aa|up_0|NC_004342.2_3163004_3163211_-,NA|74aa|down_5|NC_004342.2_3173425_3173647_-,NA|61aa|down_8|NC_004342.2_3175999_3176182_-	NA|499aa|up_9|NC_004342.2_3154497_3155994_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|up_8|NC_004342.2_3156932_3157484_+	NA	NA|129aa|up_7|NC_004342.2_3157826_3158213_+	NA	NA|71aa|up_6|NC_004342.2_3158396_3158609_-	NA	NA|292aa|up_5|NC_004342.2_3158870_3159746_+	pfam14284, PcfJ, PcfJ-like protein	NA|99aa|up_4|NC_004342.2_3159897_3160194_+	NA	cas6|70aa|up_3|NC_004342.2_3160269_3160479_+	pfam09559, Cas6, Cas6 Crispr	cas1|542aa|up_2|NC_004342.2_3160978_3162604_+	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas2|95aa|up_1|NC_004342.2_3162603_3162888_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|69aa|up_0|NC_004342.2_3163004_3163211_-	NA	cas6|211aa|down_0|NC_004342.2_3166680_3167313_+	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cas3|753aa|down_1|NC_004342.2_3167309_3169568_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas8b3|628aa|down_2|NC_004342.2_3169569_3171453_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|280aa|down_3|NC_004342.2_3171517_3172357_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|208aa|down_4|NC_004342.2_3172377_3173001_+	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	NA|74aa|down_5|NC_004342.2_3173425_3173647_-	NA	NA|358aa|down_6|NC_004342.2_3174203_3175277_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|143aa|down_7|NC_004342.2_3175578_3176007_+	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_8|NC_004342.2_3175999_3176182_-	NA	NA|514aa|down_9|NC_004342.2_3176356_3177898_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)
GCF_000092565.1_ASM9256v1	NC_004342	Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	8	3164138-3164239	8	CRISPRCasFinder	no	cas6,cas1,cas2,cas3,cas8b3,cas7,cas5	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	CTGAATATAACTTTGATGCCGTTAGGCG	28	0	0	NA	NA	I-A,I-B,II-B	1	1	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_8|NC_004342.2_3156932_3157484_+,NA|129aa|up_7|NC_004342.2_3157826_3158213_+,NA|71aa|up_6|NC_004342.2_3158396_3158609_-,NA|99aa|up_4|NC_004342.2_3159897_3160194_+,NA|69aa|up_0|NC_004342.2_3163004_3163211_-,NA|74aa|down_5|NC_004342.2_3173425_3173647_-,NA|61aa|down_8|NC_004342.2_3175999_3176182_-	NA|499aa|up_9|NC_004342.2_3154497_3155994_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|up_8|NC_004342.2_3156932_3157484_+	NA	NA|129aa|up_7|NC_004342.2_3157826_3158213_+	NA	NA|71aa|up_6|NC_004342.2_3158396_3158609_-	NA	NA|292aa|up_5|NC_004342.2_3158870_3159746_+	pfam14284, PcfJ, PcfJ-like protein	NA|99aa|up_4|NC_004342.2_3159897_3160194_+	NA	cas6|70aa|up_3|NC_004342.2_3160269_3160479_+	pfam09559, Cas6, Cas6 Crispr	cas1|542aa|up_2|NC_004342.2_3160978_3162604_+	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas2|95aa|up_1|NC_004342.2_3162603_3162888_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|69aa|up_0|NC_004342.2_3163004_3163211_-	NA	cas6|211aa|down_0|NC_004342.2_3166680_3167313_+	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cas3|753aa|down_1|NC_004342.2_3167309_3169568_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas8b3|628aa|down_2|NC_004342.2_3169569_3171453_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|280aa|down_3|NC_004342.2_3171517_3172357_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|208aa|down_4|NC_004342.2_3172377_3173001_+	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	NA|74aa|down_5|NC_004342.2_3173425_3173647_-	NA	NA|358aa|down_6|NC_004342.2_3174203_3175277_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|143aa|down_7|NC_004342.2_3175578_3176007_+	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_8|NC_004342.2_3175999_3176182_-	NA	NA|514aa|down_9|NC_004342.2_3176356_3177898_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)
GCF_000092565.1_ASM9256v1	NC_004342	Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	9	3164474-3164726	3,9,3	PILER-CR,CRISPRCasFinder,CRT	no	cas6,cas1,cas2,cas3,cas8b3,cas7,cas5	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	CTCTGAATATAACTTTGATGCCGTTAGGCGTTGAGCACA,CTGAATATAACTTTGATGCCGTTAGGCG,CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC	39,28,36	0	0	NA	NA	I-A,I-B,II-B:I-A,I-B,II-B:I-A,I-B,II-B	2,3,3	3	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_8|NC_004342.2_3156932_3157484_+,NA|129aa|up_7|NC_004342.2_3157826_3158213_+,NA|71aa|up_6|NC_004342.2_3158396_3158609_-,NA|99aa|up_4|NC_004342.2_3159897_3160194_+,NA|69aa|up_0|NC_004342.2_3163004_3163211_-,NA|74aa|down_5|NC_004342.2_3173425_3173647_-,NA|61aa|down_8|NC_004342.2_3175999_3176182_-	NA|499aa|up_9|NC_004342.2_3154497_3155994_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|up_8|NC_004342.2_3156932_3157484_+	NA	NA|129aa|up_7|NC_004342.2_3157826_3158213_+	NA	NA|71aa|up_6|NC_004342.2_3158396_3158609_-	NA	NA|292aa|up_5|NC_004342.2_3158870_3159746_+	pfam14284, PcfJ, PcfJ-like protein	NA|99aa|up_4|NC_004342.2_3159897_3160194_+	NA	cas6|70aa|up_3|NC_004342.2_3160269_3160479_+	pfam09559, Cas6, Cas6 Crispr	cas1|542aa|up_2|NC_004342.2_3160978_3162604_+	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas2|95aa|up_1|NC_004342.2_3162603_3162888_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|69aa|up_0|NC_004342.2_3163004_3163211_-	NA	cas6|211aa|down_0|NC_004342.2_3166680_3167313_+	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cas3|753aa|down_1|NC_004342.2_3167309_3169568_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas8b3|628aa|down_2|NC_004342.2_3169569_3171453_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|280aa|down_3|NC_004342.2_3171517_3172357_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|208aa|down_4|NC_004342.2_3172377_3173001_+	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	NA|74aa|down_5|NC_004342.2_3173425_3173647_-	NA	NA|358aa|down_6|NC_004342.2_3174203_3175277_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|143aa|down_7|NC_004342.2_3175578_3176007_+	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_8|NC_004342.2_3175999_3176182_-	NA	NA|514aa|down_9|NC_004342.2_3176356_3177898_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)
GCF_000092565.1_ASM9256v1	NC_004342	Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	10	3164839-3165161	10,4,4	CRISPRCasFinder,CRT,PILER-CR	no	cas6,cas1,cas2,cas3,cas8b3,cas7,cas5	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	CTGAATATAACTTTGATGCCGTTAGGCG,CTGAATATAACTTTGATGCCGNTAGGCGTTGAGCAC,CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCACAGCAT	28,36,41	0	0	NA	NA	I-A,I-B,II-B:I-A,I-B,II-B:I-A,I-B,II-B	4,4,2	4	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_8|NC_004342.2_3156932_3157484_+,NA|129aa|up_7|NC_004342.2_3157826_3158213_+,NA|71aa|up_6|NC_004342.2_3158396_3158609_-,NA|99aa|up_4|NC_004342.2_3159897_3160194_+,NA|69aa|up_0|NC_004342.2_3163004_3163211_-,NA|74aa|down_5|NC_004342.2_3173425_3173647_-,NA|61aa|down_8|NC_004342.2_3175999_3176182_-	NA|499aa|up_9|NC_004342.2_3154497_3155994_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|up_8|NC_004342.2_3156932_3157484_+	NA	NA|129aa|up_7|NC_004342.2_3157826_3158213_+	NA	NA|71aa|up_6|NC_004342.2_3158396_3158609_-	NA	NA|292aa|up_5|NC_004342.2_3158870_3159746_+	pfam14284, PcfJ, PcfJ-like protein	NA|99aa|up_4|NC_004342.2_3159897_3160194_+	NA	cas6|70aa|up_3|NC_004342.2_3160269_3160479_+	pfam09559, Cas6, Cas6 Crispr	cas1|542aa|up_2|NC_004342.2_3160978_3162604_+	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas2|95aa|up_1|NC_004342.2_3162603_3162888_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|69aa|up_0|NC_004342.2_3163004_3163211_-	NA	cas6|211aa|down_0|NC_004342.2_3166680_3167313_+	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cas3|753aa|down_1|NC_004342.2_3167309_3169568_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas8b3|628aa|down_2|NC_004342.2_3169569_3171453_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|280aa|down_3|NC_004342.2_3171517_3172357_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|208aa|down_4|NC_004342.2_3172377_3173001_+	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	NA|74aa|down_5|NC_004342.2_3173425_3173647_-	NA	NA|358aa|down_6|NC_004342.2_3174203_3175277_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|143aa|down_7|NC_004342.2_3175578_3176007_+	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_8|NC_004342.2_3175999_3176182_-	NA	NA|514aa|down_9|NC_004342.2_3176356_3177898_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)
GCF_000092565.1_ASM9256v1	NC_004342	Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	11	3165387-3165487	11	CRISPRCasFinder	no	cas6,cas1,cas2,cas3,cas8b3,cas7,cas5	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	CTGAATATAACTTTGATGCCGTTAGGCG	28	0	0	NA	NA	I-A,I-B,II-B	1	1	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_8|NC_004342.2_3156932_3157484_+,NA|129aa|up_7|NC_004342.2_3157826_3158213_+,NA|71aa|up_6|NC_004342.2_3158396_3158609_-,NA|99aa|up_4|NC_004342.2_3159897_3160194_+,NA|69aa|up_0|NC_004342.2_3163004_3163211_-,NA|74aa|down_5|NC_004342.2_3173425_3173647_-,NA|61aa|down_8|NC_004342.2_3175999_3176182_-	NA|499aa|up_9|NC_004342.2_3154497_3155994_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|up_8|NC_004342.2_3156932_3157484_+	NA	NA|129aa|up_7|NC_004342.2_3157826_3158213_+	NA	NA|71aa|up_6|NC_004342.2_3158396_3158609_-	NA	NA|292aa|up_5|NC_004342.2_3158870_3159746_+	pfam14284, PcfJ, PcfJ-like protein	NA|99aa|up_4|NC_004342.2_3159897_3160194_+	NA	cas6|70aa|up_3|NC_004342.2_3160269_3160479_+	pfam09559, Cas6, Cas6 Crispr	cas1|542aa|up_2|NC_004342.2_3160978_3162604_+	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas2|95aa|up_1|NC_004342.2_3162603_3162888_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|69aa|up_0|NC_004342.2_3163004_3163211_-	NA	cas6|211aa|down_0|NC_004342.2_3166680_3167313_+	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cas3|753aa|down_1|NC_004342.2_3167309_3169568_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas8b3|628aa|down_2|NC_004342.2_3169569_3171453_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|280aa|down_3|NC_004342.2_3171517_3172357_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|208aa|down_4|NC_004342.2_3172377_3173001_+	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	NA|74aa|down_5|NC_004342.2_3173425_3173647_-	NA	NA|358aa|down_6|NC_004342.2_3174203_3175277_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|143aa|down_7|NC_004342.2_3175578_3176007_+	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_8|NC_004342.2_3175999_3176182_-	NA	NA|514aa|down_9|NC_004342.2_3176356_3177898_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)
GCF_000092565.1_ASM9256v1	NC_004342	Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	12	3165651-3165821	12	CRISPRCasFinder	no	cas6,cas1,cas2,cas3,cas8b3,cas7,cas5	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Unclear	CTGAATATAACTTTGATGCCGTTAGGCG	28	0	0	NA	NA	I-A,I-B,II-B	2	2	Unclear	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|184aa|up_8|NC_004342.2_3156932_3157484_+,NA|129aa|up_7|NC_004342.2_3157826_3158213_+,NA|71aa|up_6|NC_004342.2_3158396_3158609_-,NA|99aa|up_4|NC_004342.2_3159897_3160194_+,NA|69aa|up_0|NC_004342.2_3163004_3163211_-,NA|74aa|down_5|NC_004342.2_3173425_3173647_-,NA|61aa|down_8|NC_004342.2_3175999_3176182_-	NA|499aa|up_9|NC_004342.2_3154497_3155994_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|184aa|up_8|NC_004342.2_3156932_3157484_+	NA	NA|129aa|up_7|NC_004342.2_3157826_3158213_+	NA	NA|71aa|up_6|NC_004342.2_3158396_3158609_-	NA	NA|292aa|up_5|NC_004342.2_3158870_3159746_+	pfam14284, PcfJ, PcfJ-like protein	NA|99aa|up_4|NC_004342.2_3159897_3160194_+	NA	cas6|70aa|up_3|NC_004342.2_3160269_3160479_+	pfam09559, Cas6, Cas6 Crispr	cas1|542aa|up_2|NC_004342.2_3160978_3162604_+	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN	cas2|95aa|up_1|NC_004342.2_3162603_3162888_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|69aa|up_0|NC_004342.2_3163004_3163211_-	NA	cas6|211aa|down_0|NC_004342.2_3166680_3167313_+	TIGR02807, hypothetical_protein_LA_3189, CRISPR-associated protein Cas6, subtype MYXAN	cas3|753aa|down_1|NC_004342.2_3167309_3169568_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas8b3|628aa|down_2|NC_004342.2_3169569_3171453_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|280aa|down_3|NC_004342.2_3171517_3172357_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|208aa|down_4|NC_004342.2_3172377_3173001_+	TIGR02586, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5/DevS, subtype MYXAN	NA|74aa|down_5|NC_004342.2_3173425_3173647_-	NA	NA|358aa|down_6|NC_004342.2_3174203_3175277_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|143aa|down_7|NC_004342.2_3175578_3176007_+	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_8|NC_004342.2_3175999_3176182_-	NA	NA|514aa|down_9|NC_004342.2_3176356_3177898_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)
GCF_000092565.1_ASM9256v1	NC_004342	Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	13	3487606-3487730	13	CRISPRCasFinder	no	csa3	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Type I-A	GATCTTGAGATAACACTTGTGGGTTGGTTATGG	33	0	0	NA	NA	NA	1	1	Orphan	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA,NA|60aa|down_0|NC_004342.2_3487791_3487971_+,NA|230aa|down_2|NC_004342.2_3489139_3489829_+	NA|120aa|up_9|NC_004342.2_3478793_3479153_-	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III	NA|106aa|up_8|NC_004342.2_3479152_3479470_-	cd04221, MauL, Methylamine utilization protein MauL	NA|340aa|up_7|NC_004342.2_3479502_3480522_-	TIGR03791, TTQ_mauG, tryptophan tryptophylquinone biosynthesis enzyme MauG	NA|220aa|up_6|NC_004342.2_3481865_3482525_-	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|83aa|up_5|NC_004342.2_3482521_3482770_-	pfam02700, PurS, Phosphoribosylformylglycinamidine (FGAM) synthase	NA|286aa|up_4|NC_004342.2_3482745_3483603_-	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional	NA|378aa|up_3|NC_004342.2_3483599_3484733_-	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]	NA|231aa|up_2|NC_004342.2_3484739_3485432_-	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC	NA|224aa|up_1|NC_004342.2_3485488_3486160_-	COG2386, CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component [Posttranslational modification, protein turnover, chaperones]	NA|215aa|up_0|NC_004342.2_3486131_3486776_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|60aa|down_0|NC_004342.2_3487791_3487971_+	NA	NA|379aa|down_1|NC_004342.2_3488006_3489143_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|230aa|down_2|NC_004342.2_3489139_3489829_+	NA	NA|255aa|down_3|NC_004342.2_3489829_3490594_-	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|192aa|down_4|NC_004342.2_3491510_3492086_+	pfam14066, DUF4256, Protein of unknown function (DUF4256)	NA|96aa|down_5|NC_004342.2_3492765_3493053_-	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional	NA|302aa|down_6|NC_004342.2_3493058_3493964_-	COG1715, Mrr, Restriction endonuclease [Defense mechanisms]	NA|139aa|down_7|NC_004342.2_3494088_3494505_-	cd00586, 4HBT, 4-hydroxybenzoyl-CoA thioesterase (4HBT)	csa3|127aa|down_8|NC_004342.2_3496097_3496478_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|131aa|down_9|NC_004342.2_3496458_3496851_+	pfam13564, DoxX_2, DoxX-like family
GCF_000092565.1_ASM9256v1	NC_004342	Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	14	4059671-4059766	14	CRISPRCasFinder	no		WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	Orphan	AGGAAAGCGTTGTGTTGAGTTTTCC	25	1	2	4059696-4059741|4059696-4059741	NC_004342.2_2711051-2711096|NC_004342.2_2711122-2711167	NA	1	1	Orphan	WYL,Cas9_archaeal,cas1,cas4,cas7,cas8c,cas5,csa3,DinG,cas3,cas6,cas2,cas8b3	NA|140aa|up_9|NC_004342.2_4048234_4048654_+,NA|372aa|up_8|NC_004342.2_4048685_4049801_+,NA|58aa|up_7|NC_004342.2_4049833_4050007_-,NA|124aa|up_0|NC_004342.2_4059073_4059445_+,NA|163aa|down_0|NC_004342.2_4060652_4061141_-,NA|112aa|down_1|NC_004342.2_4061150_4061486_-,NA|48aa|down_8|NC_004342.2_4067250_4067394_+	NA|140aa|up_9|NC_004342.2_4048234_4048654_+	NA	NA|372aa|up_8|NC_004342.2_4048685_4049801_+	NA	NA|58aa|up_7|NC_004342.2_4049833_4050007_-	NA	NA|358aa|up_6|NC_004342.2_4050257_4051331_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|463aa|up_5|NC_004342.2_4051918_4053307_-	pfam07588, DUF1554, Protein of unknown function (DUF1554)	NA|163aa|up_4|NC_004342.2_4054405_4054894_-	pfam15428, Imm26, Immunity protein 26	NA|596aa|up_3|NC_004342.2_4055042_4056830_-	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed	NA|433aa|up_2|NC_004342.2_4057080_4058379_+	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|219aa|up_1|NC_004342.2_4058375_4059032_+	cd16373, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family	NA|124aa|up_0|NC_004342.2_4059073_4059445_+	NA	NA|163aa|down_0|NC_004342.2_4060652_4061141_-	NA	NA|112aa|down_1|NC_004342.2_4061150_4061486_-	NA	NA|184aa|down_2|NC_004342.2_4061952_4062504_-	pfam03168, LEA_2, Late embryogenesis abundant protein	NA|341aa|down_3|NC_004342.2_4062508_4063531_-	cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1	NA|109aa|down_4|NC_004342.2_4063527_4063854_-	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE)	NA|156aa|down_5|NC_004342.2_4064274_4064742_+	pfam11827, DUF3347, Protein of unknown function (DUF3347)	NA|330aa|down_6|NC_004342.2_4064720_4065710_+	pfam11916, Vac14_Fig4_bd, Vacuolar protein 14 C-terminal Fig4p binding	NA|261aa|down_7|NC_004342.2_4065718_4066501_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|48aa|down_8|NC_004342.2_4067250_4067394_+	NA	NA|491aa|down_9|NC_004342.2_4067554_4069027_-	PRK09123, PRK09123, amidophosphoribosyltransferase; Provisional
