The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_014125	Legionella pneumophila 2300/99 Alcoy, complete sequence	3516334	955233	995911	3516334	transposase,tRNA,protease	Pseudomonas_phage(25.0%)	34	NA	NA
WP_011945914.1|955233_956529_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_013101193.1|956792_957329_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_013101194.1|957526_958498_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_079996937.1|958494_958980_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_013101196.1|959168_960335_+	DUF1574 family protein	NA	NA	NA	NA	NA
WP_013101197.1|960331_961774_+	MBOAT family protein	NA	A0A125RNP0	Pseudomonas_phage	40.2	1.9e-71
WP_011945918.1|961872_963249_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_011213317.1|963453_964155_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_011945919.1|964320_965568_+	MFS transporter	NA	NA	NA	NA	NA
WP_011945920.1|965953_966337_+	DUF3757 domain-containing protein	NA	NA	NA	NA	NA
WP_013101198.1|966614_967958_-	quinolinate synthase NadA	NA	NA	NA	NA	NA
WP_011945922.1|968032_969682_-	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_011945923.1|969678_971049_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	49.9	7.4e-113
WP_011945924.1|971201_972905_+	sulfate permease	NA	A0A2H4J153	uncultured_Caudovirales_phage	26.5	6.5e-42
WP_011945925.1|973106_974810_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_013101199.1|975038_976037_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_013101200.1|976261_978649_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	38.2	3.1e-175
WP_010946542.1|978889_980329_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_013101201.1|980325_981168_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA	NA
WP_013101202.1|981164_982256_+	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_010946545.1|982230_983646_+	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_011945930.1|983737_984055_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011213320.1|984250_985288_+	rod shape-determining protein	NA	NA	NA	NA	NA
WP_010946548.1|985265_986174_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_011945932.1|986170_986650_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_013101203.1|986585_987188_-	pseudouridine synthase	NA	NA	NA	NA	NA
WP_011945934.1|987448_988147_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011945935.1|988260_989517_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	74.1	1.9e-14
WP_011215007.1|989918_990254_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A218MMY6	uncultured_virus	36.5	5.8e-11
WP_011945936.1|990285_992553_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.1	1.9e-166
WP_011945937.1|992776_993556_+	glycosyltransferase family 2 protein	NA	S5WBE2	Pseudomonas_phage	30.1	1.2e-06
WP_013101205.1|993558_994809_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_014326787.1|994809_995184_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011945940.1|995314_995911_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
>prophage 2
NC_014125	Legionella pneumophila 2300/99 Alcoy, complete sequence	3516334	1006238	1013076	3516334		Acinetobacter_phage(42.86%)	9	NA	NA
WP_011215021.1|1006238_1007015_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	48.6	3.9e-58
WP_027219650.1|1007007_1008042_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	47.6	6.0e-75
WP_010946571.1|1008019_1008598_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	53.2	1.0e-55
WP_010946572.1|1008631_1009357_-	LPS export ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.3	3.1e-17
WP_027219648.1|1009353_1009863_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_011215025.1|1009843_1010413_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_011945955.1|1010409_1010937_-	3-deoxy-manno-octulosonate-8-phosphatase KdsC	NA	A0A140XBD6	Dickeya_phage	47.7	1.4e-27
WP_010946576.1|1010950_1011913_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	34.1	4.2e-38
WP_010946577.1|1012278_1013076_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	33.8	1.3e-21
>prophage 3
NC_014125	Legionella pneumophila 2300/99 Alcoy, complete sequence	3516334	1294348	1369020	3516334	transposase,integrase	Acidithiobacillus_phage(14.29%)	58	1290511:1290526	1359981:1359996
1290511:1290526	attL	AAAATAAGTAACAATC	NA	NA	NA	NA
WP_011946163.1|1294348_1295530_-|integrase	site-specific integrase	integrase	A0A0M4QX09	Salmonella_phage	29.7	5.9e-42
WP_011946164.1|1296249_1296435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011946165.1|1296714_1297140_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011946166.1|1297233_1297737_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013101380.1|1298113_1299493_-	P-loop ATPase	NA	R9TRQ8	Vibrio_phage	25.8	9.1e-18
WP_013101137.1|1299924_1300800_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011946169.1|1300796_1301285_+	DUF4760 domain-containing protein	NA	NA	NA	NA	NA
WP_011946170.1|1301479_1303234_-	DUF927 domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	30.5	2.4e-55
WP_027264490.1|1303310_1303562_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_154219819.1|1303931_1304108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011946173.1|1304258_1304705_+	helix-turn-helix domain-containing protein	NA	K4ICM4	Acidithiobacillus_phage	43.8	1.2e-24
WP_011946174.1|1304708_1305278_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	58.5	1.6e-53
WP_013101382.1|1305912_1307472_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	51.5	2.5e-133
WP_011946190.1|1308712_1309237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041932044.1|1309623_1311231_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_011946192.1|1311546_1313352_+	GNAT family N-acetyltransferase	NA	A0A2K5B2B6	Erysipelothrix_phage	34.7	2.6e-17
WP_013101388.1|1313464_1314070_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011946194.1|1314110_1314605_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011946195.1|1315248_1315635_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013101389.1|1315719_1316931_-|transposase	IS4 family transposase	transposase	A4KWT9	Enterobacteria_phage	36.7	1.1e-72
WP_011946196.1|1317109_1319017_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_013101390.1|1319038_1320319_-	DUF2130 domain-containing protein	NA	NA	NA	NA	NA
WP_013101391.1|1320702_1321812_+	Fic family protein	NA	D7RWK9	Brochothrix_phage	25.5	1.7e-06
WP_179110303.1|1321895_1322351_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011946201.1|1323051_1323720_+	HAD family phosphatase	NA	A0A1D8KNV9	Synechococcus_phage	26.2	3.1e-08
WP_011946202.1|1323839_1324079_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011946203.1|1324226_1324685_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011946204.1|1324807_1325410_+	exopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_013101393.1|1325909_1327886_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011946206.1|1328129_1328546_+|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
WP_115251546.1|1328672_1329841_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	44.3	4.8e-60
WP_032802361.1|1330756_1331620_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027264513.1|1331924_1333136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011946212.1|1333179_1334172_-	phosphotransferase	NA	NA	NA	NA	NA
WP_011946213.1|1334370_1334874_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_011946214.1|1334972_1336235_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011946215.1|1336566_1337865_-	DUF2254 domain-containing protein	NA	NA	NA	NA	NA
WP_011946216.1|1338059_1338479_-	EamA family transporter	NA	NA	NA	NA	NA
WP_011946217.1|1338664_1339546_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_013101395.1|1342138_1342273_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011946220.1|1342405_1343101_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011946221.1|1343194_1343833_-	Dot/Icm T4SS effector RavN	NA	NA	NA	NA	NA
WP_011946222.1|1344048_1344759_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013101396.1|1345130_1347515_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_011946224.1|1347523_1347796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013101399.1|1349850_1352205_+	hypothetical protein	NA	A0A2K9L6L9	Tupanvirus	56.3	1.6e-115
WP_011946228.1|1352314_1352788_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011946229.1|1352879_1353995_-	serine hydrolase	NA	A0A1D8EXR7	Mycobacterium_phage	27.6	1.4e-21
WP_011946230.1|1354262_1355327_+	histidine-type phosphatase	NA	NA	NA	NA	NA
WP_079995362.1|1355488_1356259_+	Dot/Icm T4SS effector Ceg19	NA	NA	NA	NA	NA
WP_011946232.1|1356460_1356913_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011946233.1|1357122_1358451_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_011946234.1|1358576_1359338_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_011946235.1|1359573_1360164_-	hypothetical protein	NA	NA	NA	NA	NA
1359981:1359996	attR	GATTGTTACTTATTTT	NA	NA	NA	NA
WP_011946236.1|1360445_1361141_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_013101402.1|1361324_1364756_+	cation-transporting P-type ATPase	NA	NA	NA	NA	NA
WP_011946238.1|1365015_1366710_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_011946243.1|1367985_1369020_-|transposase	IS481 family transposase	transposase	A0A077SLK2	Escherichia_phage	79.5	2.1e-160
>prophage 4
NC_014125	Legionella pneumophila 2300/99 Alcoy, complete sequence	3516334	1422468	1432203	3516334		Staphylococcus_phage(42.86%)	9	NA	NA
WP_011946288.1|1422468_1423797_+	sigma-54-dependent Fis family transcriptional regulator	NA	W8CYM9	Bacillus_phage	28.1	4.3e-09
WP_011213531.1|1424225_1424471_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011946289.1|1424767_1426204_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_011946290.1|1426266_1427340_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	28.1	2.8e-30
WP_011946291.1|1427324_1427939_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	37.9	1.0e-21
WP_011946292.1|1427935_1429144_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	48.5	1.6e-98
WP_010946914.1|1429151_1429619_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.1	9.2e-23
WP_010946915.1|1429744_1431382_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.3	3.6e-154
WP_010946916.1|1431378_1432203_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	43.9	1.8e-53
>prophage 5
NC_014125	Legionella pneumophila 2300/99 Alcoy, complete sequence	3516334	2361395	2371518	3516334		Bacillus_phage(16.67%)	7	NA	NA
WP_011946921.1|2361395_2363084_-	S8 family serine peptidase	NA	A0A1B0T6A2	Bacillus_phage	30.4	8.0e-16
WP_011946922.1|2363215_2364223_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_013101644.1|2364346_2365672_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	31.2	3.1e-47
WP_011214269.1|2365690_2366839_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	58.5	7.6e-127
WP_011946924.1|2367047_2368160_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	5.0e-51
WP_010947740.1|2368255_2369395_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	26.9	1.6e-23
WP_011946925.1|2369583_2371518_-	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	49.6	1.3e-147
