assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000093145.3_ASM9314v2	NC_013446	Comamonas thiooxydans, complete sequence	1	1014789-1014894	1	CRISPRCasFinder	no	DEDDh	DinG,DEDDh,WYL,Cas9_archaeal,csa3,cas3	Unclear	GGTGGCGAGCGTCAAGAGCGCAGCTTCG	28	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,WYL,Cas9_archaeal,csa3,cas3	NA,NA|277aa|down_9|NC_013446.2_1029618_1030449_-	NA|190aa|up_9|NC_013446.2_1004546_1005116_+	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|260aa|up_8|NC_013446.2_1005169_1005949_+	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|129aa|up_7|NC_013446.2_1006088_1006475_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|233aa|up_6|NC_013446.2_1006585_1007284_+	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|328aa|up_5|NC_013446.2_1007331_1008315_+	PRK07630, PRK07630, CobD/CbiB family protein; Provisional	NA|297aa|up_4|NC_013446.2_1008461_1009352_-	cd16896, LT_Slt70-like, uncharacterized lytic transglycosylase subfamily with similarity to Slt70	NA|329aa|up_3|NC_013446.2_1009495_1010482_-	PRK00098, PRK00098, GTPase RsgA; Reviewed	NA|113aa|up_2|NC_013446.2_1010487_1010826_-	PRK00823, phhB, pterin-4-alpha-carbinolamine dehydratase; Validated	NA|434aa|up_1|NC_013446.2_1010845_1012147_-	cd07343, M48A_Zmpste24p_like, Peptidase M48 subfamily A, a type 1 CaaX endopeptidase	DEDDh|175aa|up_0|NC_013446.2_1012261_1012786_+	PRK05359, PRK05359, oligoribonuclease; Provisional	NA|411aa|down_0|NC_013446.2_1015351_1016584_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|293aa|down_1|NC_013446.2_1017274_1018153_-	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]	NA|326aa|down_2|NC_013446.2_1018371_1019349_-	PRK05458, PRK05458, guanosine 5'-monophosphate oxidoreductase; Provisional	NA|216aa|down_3|NC_013446.2_1019548_1020196_-	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region	NA|499aa|down_4|NC_013446.2_1020302_1021799_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|391aa|down_5|NC_013446.2_1021924_1023097_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|509aa|down_6|NC_013446.2_1023158_1024685_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|828aa|down_7|NC_013446.2_1024867_1027351_+	PRK11773, uvrD, DNA-dependent helicase II; Provisional	NA|655aa|down_8|NC_013446.2_1027421_1029386_-	COG3211, PhoX, Predicted phosphatase [General function prediction only]	NA|277aa|down_9|NC_013446.2_1029618_1030449_-	NA
GCF_000093145.3_ASM9314v2	NC_013446	Comamonas thiooxydans, complete sequence	2	4716690-4716912	2	CRISPRCasFinder	no		DinG,DEDDh,WYL,Cas9_archaeal,csa3,cas3	Orphan	TCTTGCTGCCGCAATGTCTGACTTCAGCACTGGCTGAAGTCAGGGTGGCGTTTTT	55	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,WYL,Cas9_archaeal,csa3,cas3	NA|164aa|up_3|NC_013446.2_4713913_4714405_-,NA	NA|360aa|up_9|NC_013446.2_4706822_4707902_-	cd03532, Rieske_RO_Alpha_VanA_DdmC, Rieske non-heme iron oxygenase (RO) family, Vanillate-O-demethylase oxygenase (VanA) and dicamba O-demethylase oxygenase (DdmC) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth	NA|453aa|up_8|NC_013446.2_4707916_4709275_-	TIGR00895, transport_protein, benzoate transport	NA|160aa|up_7|NC_013446.2_4709436_4709916_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|359aa|up_6|NC_013446.2_4710023_4711100_-	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only]	NA|255aa|up_5|NC_013446.2_4711182_4711947_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|610aa|up_4|NC_013446.2_4712126_4713956_-	COG5265, ATM1, ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]	NA|164aa|up_3|NC_013446.2_4713913_4714405_-	NA	NA|156aa|up_2|NC_013446.2_4714617_4715085_+	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism]	NA|213aa|up_1|NC_013446.2_4715152_4715791_-	pfam04519, Bactofilin, Polymer-forming cytoskeletal	NA|171aa|up_0|NC_013446.2_4716032_4716545_-	PRK11688, PRK11688, thioesterase family protein	NA|265aa|down_0|NC_013446.2_4716964_4717759_-	PRK06688, PRK06688, enoyl-CoA hydratase; Provisional	NA|278aa|down_1|NC_013446.2_4717805_4718639_-	pfam13622, 4HBT_3, Thioesterase-like superfamily	NA|322aa|down_2|NC_013446.2_4718676_4719642_-	COG4757, COG4757, Predicted alpha/beta hydrolase [General function prediction only]	NA|399aa|down_3|NC_013446.2_4719656_4720853_-	PRK09052, PRK09052, acetyl-CoA C-acyltransferase	NA|808aa|down_4|NC_013446.2_4720874_4723298_-	COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]	NA|148aa|down_5|NC_013446.2_4723380_4723824_-	pfam09917, DUF2147, Uncharacterized protein conserved in bacteria (DUF2147)	NA|599aa|down_6|NC_013446.2_4723911_4725708_-	PTZ00456, PTZ00456, acyl-CoA dehydrogenase; Provisional	NA|213aa|down_7|NC_013446.2_4725785_4726424_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|232aa|down_8|NC_013446.2_4726767_4727463_-	PRK09480, slmA, division inhibitor protein; Provisional	NA|500aa|down_9|NC_013446.2_4727639_4729139_-	PRK10337, PRK10337, sensor protein QseC; Provisional
