The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_014364	Sediminispirochaeta smaragdinae DSM 11293, complete sequence	4653970	402145	435121	4653970	integrase,transposase	Virus_Rctr41k(50.0%)	39	405159:405178	433339:433358
WP_041865946.1|402145_402505_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	51.7	1.2e-30
WP_049784571.1|402486_403263_-|integrase	phage integrase N-terminal SAM-like domain-containing protein	integrase	A0A1P8DJJ6	Virus_Rctr41k	39.3	3.0e-10
WP_013253006.1|403842_404571_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013253007.1|404567_405002_+	hypothetical protein	NA	NA	NA	NA	NA
405159:405178	attL	CTCAATTGGATGTTATGTTG	NA	NA	NA	NA
WP_013253008.1|405192_405876_+	NERD domain-containing protein	NA	NA	NA	NA	NA
WP_013253009.1|405872_406436_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013253010.1|406635_408267_+	putative DNA binding domain-containing protein	NA	NA	NA	NA	NA
WP_013253011.1|408461_409388_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013253012.1|410186_410729_+	TIR domain-containing protein	NA	NA	NA	NA	NA
WP_013253013.1|410721_411363_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013253014.1|411619_411874_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013253015.1|411866_412292_+	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_013253016.1|412659_413004_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_013253017.1|412993_413389_+	HEPN domain-containing protein	NA	NA	NA	NA	NA
WP_013253018.1|414086_414989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013253019.1|415133_416135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148224013.1|416311_416527_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171814748.1|416872_417358_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013253020.1|417621_418287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013253021.1|418562_419750_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_013253022.1|419996_420905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013253023.1|421115_421517_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013253024.1|421533_422013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013253025.1|422206_422860_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_013253026.1|422856_423276_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095522519.1|423336_423504_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_148224015.1|423591_424455_+|transposase	IS3 family transposase	transposase	Q716C2	Shigella_phage	32.7	9.6e-26
WP_013253027.1|424834_425089_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013253028.1|425081_425507_+	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_171814749.1|425938_426070_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083771438.1|426249_426738_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_041865951.1|426956_427907_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083771439.1|427930_428539_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_171814750.1|429026_429248_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013253031.1|429321_430680_-	MATE family efflux transporter	NA	NA	NA	NA	NA
WP_013253032.1|431105_432038_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_013253033.1|432218_433304_+	Fic family protein	NA	D7RWK9	Brochothrix_phage	29.4	7.1e-26
WP_013253034.1|433564_434089_+	DUF4468 domain-containing protein	NA	NA	NA	NA	NA
433339:433358	attR	CTCAATTGGATGTTATGTTG	NA	NA	NA	NA
WP_041865953.1|434917_435121_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 2
NC_014364	Sediminispirochaeta smaragdinae DSM 11293, complete sequence	4653970	1842198	1853457	4653970		Bacillus_phage(16.67%)	8	NA	NA
WP_049784607.1|1842198_1844673_+	helicase c2	NA	A0A127AW80	Bacillus_phage	30.9	1.1e-77
WP_013254304.1|1844901_1845165_-	co-chaperone GroES	NA	A0A221S4G8	uncultured_virus	47.7	9.4e-17
WP_013254305.1|1845328_1845676_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013254306.1|1845883_1846759_+	RNA polymerase sigma factor RpoD/SigA	NA	A0A248SJA5	Salicola_phage	25.2	2.4e-16
WP_013254307.1|1846937_1849604_+	pyruvate, phosphate dikinase	NA	A0A2D2W2B1	Stenotrophomonas_phage	44.4	1.4e-94
WP_041866021.1|1849723_1850413_+	base excision DNA repair protein	NA	NA	NA	NA	NA
WP_013254309.1|1850512_1852147_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	25.2	1.6e-45
WP_013254310.1|1852197_1853457_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	41.7	2.5e-70
>prophage 3
NC_014364	Sediminispirochaeta smaragdinae DSM 11293, complete sequence	4653970	2084081	2141672	4653970	protease,terminase,transposase,portal	Marinitoga_camini_virus(14.29%)	59	NA	NA
WP_013254518.1|2084081_2086619_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	39.5	3.2e-125
WP_013254519.1|2086622_2087255_+	3'-5' exonuclease	NA	A0A0K2SUJ2	Clostridium_phage	38.2	9.5e-23
WP_013254520.1|2087251_2088181_+	ribonuclease Z	NA	NA	NA	NA	NA
WP_013254521.1|2088199_2089363_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_148224163.1|2089452_2090274_+	AmmeMemoRadiSam system protein B	NA	NA	NA	NA	NA
WP_013254523.1|2090261_2091935_-	DUF115 domain-containing protein	NA	NA	NA	NA	NA
WP_013254524.1|2091912_2093514_-	DUF115 domain-containing protein	NA	NA	NA	NA	NA
WP_013254525.1|2093516_2094467_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013254526.1|2094463_2097532_-	hypothetical protein	NA	NA	NA	NA	NA
WP_148224164.1|2097728_2098127_+	septum formation initiator family protein	NA	NA	NA	NA	NA
WP_013254528.1|2098123_2098699_+	L-threonylcarbamoyladenylate synthase	NA	NA	NA	NA	NA
WP_013254529.1|2098733_2100065_-	DUF1015 domain-containing protein	NA	NA	NA	NA	NA
WP_013254530.1|2100163_2100790_+	thiamine diphosphokinase	NA	NA	NA	NA	NA
WP_013254531.1|2100808_2102602_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013254532.1|2102582_2103077_-	HIT domain-containing protein	NA	NA	NA	NA	NA
WP_013254533.1|2103087_2103891_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013254534.1|2103887_2104844_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_041866032.1|2104874_2105219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013254536.1|2105221_2105971_+	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_148224165.1|2106127_2106268_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_013254538.1|2107253_2108183_+	ketopantoate reductase	NA	NA	NA	NA	NA
WP_083771473.1|2108360_2109227_+	S-layer homology domain-containing protein	NA	NA	NA	NA	NA
WP_013254540.1|2109775_2110222_-	DUF1284 domain-containing protein	NA	NA	NA	NA	NA
WP_013254541.1|2110306_2110852_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA	NA
WP_148224058.1|2111227_2111488_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013254542.1|2111684_2112812_+	InlB B-repeat-containing protein	NA	NA	NA	NA	NA
WP_013254543.1|2112813_2115105_+	InlB B-repeat-containing protein	NA	NA	NA	NA	NA
WP_013254544.1|2115402_2116614_-	AraC family transcriptional regulator	NA	S5WIW9	Leptospira_phage	33.6	3.6e-10
WP_148224166.1|2116901_2117300_+	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_148224167.1|2117424_2118084_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_013254547.1|2118588_2118939_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171814806.1|2119180_2119798_+	DNA/RNA non-specific endonuclease	NA	A0A2H4N7Z3	Lake_Baikal_phage	44.5	9.0e-26
WP_013254549.1|2119847_2121035_-|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	34.4	3.0e-54
WP_148224059.1|2120987_2121332_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA	NA
WP_013254550.1|2121423_2123298_-	hypothetical protein	NA	A0A139ZPI1	Marinitoga_camini_virus	24.8	2.8e-30
WP_013254551.1|2123294_2124836_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013254552.1|2124848_2126519_-	ATP-binding protein	NA	A0A139ZPI2	Marinitoga_camini_virus	30.5	1.2e-59
WP_013254553.1|2126532_2127723_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013254554.1|2127925_2128306_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_041866037.1|2128348_2128567_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013254555.1|2128619_2128988_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_013254556.1|2129016_2129205_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148224168.1|2130394_2130664_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013254559.1|2130660_2131533_+	phage recombination protein Bet	NA	A0A1P8BKG8	Lactococcus_phage	31.4	4.7e-12
WP_013254560.1|2131551_2132241_+	hypothetical protein	NA	R9VWB9	Serratia_phage	33.9	9.4e-24
WP_013254561.1|2132237_2132714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013254562.1|2132710_2133103_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013254563.1|2133112_2133715_+	single-stranded DNA-binding protein	NA	A0A0F7L5K1	uncultured_marine_virus	45.0	7.4e-17
WP_013254564.1|2133727_2134816_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013254565.1|2134820_2135222_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013254566.1|2135205_2135424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013254567.1|2135420_2135612_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013254568.1|2135635_2135815_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013254569.1|2135957_2136674_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013254570.1|2136981_2137380_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013254571.1|2137383_2137893_+|terminase	phage terminase small subunit P27 family	terminase	K7PHI2	Enterobacteria_phage	31.5	1.1e-05
WP_013254572.1|2137889_2139611_+|terminase	terminase large subunit	terminase	A0A0U4B0C7	Pseudomonas_phage	38.6	5.5e-97
WP_013254573.1|2139607_2140849_+|portal	phage portal protein	portal	Q6DMU2	Streptococcus_phage	43.8	4.1e-86
WP_013254574.1|2140838_2141672_+|protease	Clp protease ClpP	protease	A0A1W6JT88	Pseudomonas_phage	39.9	6.4e-35
>prophage 4
NC_014364	Sediminispirochaeta smaragdinae DSM 11293, complete sequence	4653970	2666654	2686450	4653970	capsid,portal,protease,terminase,integrase,head	Organic_Lake_phycodnavirus(16.67%)	25	2665776:2665791	2681244:2681259
2665776:2665791	attL	CTACATGTTCTCATCG	NA	NA	NA	NA
WP_041866071.1|2666654_2667515_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_041866072.1|2667511_2667916_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_013255054.1|2667948_2668332_-	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_041866073.1|2668603_2668852_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_013255055.1|2668814_2669231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013255056.1|2669289_2669850_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013255057.1|2670084_2670474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013255058.1|2670475_2670724_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013255060.1|2670818_2671190_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013254586.1|2671196_2671430_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013255061.1|2671434_2672046_-	hypothetical protein	NA	F2Y2D1	Organic_Lake_phycodnavirus	48.4	2.3e-05
WP_013255062.1|2672042_2675357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013255063.1|2675359_2677537_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013255064.1|2677517_2677793_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013255065.1|2677813_2678215_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013255066.1|2678217_2678910_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013255067.1|2678911_2679310_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013255068.1|2679287_2679713_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013255069.1|2679709_2680267_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013255070.1|2680270_2680579_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013255071.1|2680637_2681888_-|capsid	phage major capsid protein	capsid	A0A0F7L2V9	uncultured_marine_virus	43.0	1.0e-60
2681244:2681259	attR	CGATGAGAACATGTAG	NA	NA	NA	NA
WP_013255072.1|2681902_2682610_-|head,protease	HK97 family phage prohead protease	head,protease	Q8SBH9	Shigella_phage	39.4	7.9e-26
WP_013255073.1|2682606_2684223_-|portal	phage portal protein	portal	A0A2K5B287	Erysipelothrix_phage	39.5	8.3e-71
WP_013255074.1|2684219_2685944_-|terminase	terminase large subunit	terminase	A0A0U4B0C7	Pseudomonas_phage	38.3	2.5e-97
WP_013255075.1|2685940_2686450_-|terminase	phage terminase small subunit P27 family	terminase	K7PHI2	Enterobacteria_phage	33.1	2.9e-06
>prophage 5
NC_014364	Sediminispirochaeta smaragdinae DSM 11293, complete sequence	4653970	3343948	3353341	4653970		Synechococcus_phage(33.33%)	6	NA	NA
WP_013255680.1|3343948_3345814_-	phosphoribosylamine--glycine ligase	NA	M4QRX9	Synechococcus_phage	40.8	8.8e-16
WP_013255681.1|3345801_3346857_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	43.4	1.0e-61
WP_013255682.1|3346856_3348302_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.2	4.1e-53
WP_013255683.1|3348294_3349008_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A127KMU1	Cyanophage	40.9	3.1e-46
WP_013255684.1|3349004_3349490_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	40.1	3.9e-24
WP_049784782.1|3349513_3353341_-	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.6	3.1e-31
