assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000145235.1_ASM14523v1	NC_014391	Micromonospora aurantiaca ATCC 27029, complete sequence	1	218385-218483	1	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	Orphan	CCGCCCTGCTGGCCGTAACCGCCC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	NA|249aa|up_7|NC_014391.1_209588_210335_+,NA|71aa|down_4|NC_014391.1_225187_225400_+,NA|280aa|down_7|NC_014391.1_227315_228155_+	NA|431aa|up_9|NC_014391.1_207690_208983_+	PRK09268, PRK09268, acetyl-CoA C-acetyltransferase	NA|172aa|up_8|NC_014391.1_209076_209592_+	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family	NA|249aa|up_7|NC_014391.1_209588_210335_+	NA	NA|475aa|up_6|NC_014391.1_210423_211848_+	cd03302, Adenylsuccinate_lyase_2, Adenylsuccinate lyase (ASL)_subgroup 2	NA|192aa|up_5|NC_014391.1_211951_212527_-	pfam01906, YbjQ_1, Putative heavy-metal-binding	NA|228aa|up_4|NC_014391.1_212539_213223_-	cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms	NA|88aa|up_3|NC_014391.1_213693_213957_+	pfam02700, PurS, Phosphoribosylformylglycinamidine (FGAM) synthase	NA|228aa|up_2|NC_014391.1_213953_214637_+	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|904aa|up_1|NC_014391.1_214701_217413_+	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|250aa|up_0|NC_014391.1_217423_218173_+	COG2045, COG2045, Phosphosulfolactate phosphohydrolase and related enzymes [Coenzyme metabolism / General function prediction only]	NA|143aa|down_0|NC_014391.1_220661_221090_+	pfam17844, SCP_3, Bacterial SCP ortholog	NA|506aa|down_1|NC_014391.1_221258_222776_+	PRK07847, PRK07847, amidophosphoribosyltransferase; Provisional	NA|385aa|down_2|NC_014391.1_222833_223988_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|364aa|down_3|NC_014391.1_224115_225207_+	TIGR04261, putative_arylsulfatase_regulatory_protein, radical SAM/SPASM domain protein, GRRM system	NA|71aa|down_4|NC_014391.1_225187_225400_+	NA	NA|72aa|down_5|NC_014391.1_225550_225766_-	pfam11273, DUF3073, Protein of unknown function (DUF3073)	NA|361aa|down_6|NC_014391.1_226057_227140_-	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]	NA|280aa|down_7|NC_014391.1_227315_228155_+	NA	NA|70aa|down_8|NC_014391.1_228411_228621_+	cd04762, HTH_MerR-trunc, Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins	NA|131aa|down_9|NC_014391.1_228692_229085_-	TIGR03666, Rv2061_F420, PPOX class probable F420-dependent enzyme, Rv2061 family
GCF_000145235.1_ASM14523v1	NC_014391	Micromonospora aurantiaca ATCC 27029, complete sequence	2	1688263-1688355	2	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	Orphan	GCCGTACTGCGGCTGCTGCGGCGG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	NA|397aa|up_9|NC_014391.1_1671075_1672266_-,NA	NA|397aa|up_9|NC_014391.1_1671075_1672266_-	NA	NA|595aa|up_8|NC_014391.1_1674300_1676085_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|622aa|up_7|NC_014391.1_1676098_1677964_-	pfam10131, PTPS_related, 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein	NA|421aa|up_6|NC_014391.1_1678057_1679320_+	cd10276, BamB_YfgL, Beta-barrel assembly machinery (Bam) complex component B and related proteins	NA|431aa|up_5|NC_014391.1_1679316_1680609_+	pfam13360, PQQ_2, PQQ-like domain	NA|440aa|up_4|NC_014391.1_1680609_1681929_-	cd02549, Peptidase_C39A, A sub-family of peptidase family C39	NA|223aa|up_3|NC_014391.1_1682377_1683046_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|381aa|up_2|NC_014391.1_1683066_1684209_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|850aa|up_1|NC_014391.1_1684414_1686964_+	pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum	NA|129aa|up_0|NC_014391.1_1687209_1687596_+	pfam18029, Glyoxalase_6, Glyoxalase-like domain	NA|688aa|down_0|NC_014391.1_1688615_1690679_-	PRK11154, fadJ, fatty acid oxidation complex subunit alpha FadJ	NA|399aa|down_1|NC_014391.1_1690675_1691872_-	TIGR01930, 3-ketoacyl-CoA_thiolase, acetyl-CoA acetyltransferases	NA|440aa|down_2|NC_014391.1_1691975_1693295_-	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis]	NA|520aa|down_3|NC_014391.1_1693527_1695087_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|272aa|down_4|NC_014391.1_1695174_1695990_+	PRK14965, PRK14965, DNA polymerase III subunits gamma and tau; Provisional	NA|191aa|down_5|NC_014391.1_1696059_1696632_-	pfam11452, DUF3000, Protein of unknown function (DUF3000)	NA|364aa|down_6|NC_014391.1_1696805_1697897_+	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|470aa|down_7|NC_014391.1_1697906_1699316_+	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed	NA|234aa|down_8|NC_014391.1_1699312_1700014_+	pfam06778, Chlor_dismutase, Chlorite dismutase	NA|367aa|down_9|NC_014391.1_1700109_1701210_-	pfam03067, LPMO_10, Lytic polysaccharide mono-oxygenase, cellulose-degrading
GCF_000145235.1_ASM14523v1	NC_014391	Micromonospora aurantiaca ATCC 27029, complete sequence	3	2234358-2234447	3	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	Orphan	GGGGTTTGGCCGCCGTCCGGGGT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	NA|216aa|up_3|NC_014391.1_2229779_2230427_-,NA	NA|583aa|up_9|NC_014391.1_2223839_2225588_+	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	NA|181aa|up_8|NC_014391.1_2225646_2226189_-	cd03358, LbH_WxcM_N_like, WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain	NA|113aa|up_7|NC_014391.1_2226256_2226595_-	COG3502, COG3502, Uncharacterized protein conserved in bacteria [Function unknown]	NA|219aa|up_6|NC_014391.1_2226679_2227336_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|463aa|up_5|NC_014391.1_2227346_2228735_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|317aa|up_4|NC_014391.1_2228741_2229692_-	cd13569, PBP2_TAXI_TRAP_like_1, Substrate binding domain of putative TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold	NA|216aa|up_3|NC_014391.1_2229779_2230427_-	NA	NA|266aa|up_2|NC_014391.1_2230533_2231331_-	PRK02101, PRK02101, peroxide stress protein YaaA	NA|535aa|up_1|NC_014391.1_2231353_2232958_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|359aa|up_0|NC_014391.1_2233040_2234117_+	COG4850, COG4850, Uncharacterized conserved protein [Function unknown]	NA|701aa|down_0|NC_014391.1_2234491_2236594_-	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|707aa|down_1|NC_014391.1_2236581_2238702_-	cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins	NA|243aa|down_2|NC_014391.1_2239001_2239730_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|395aa|down_3|NC_014391.1_2239820_2241005_-	TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family	NA|411aa|down_4|NC_014391.1_2241108_2242341_+	PRK00844, glgC, glucose-1-phosphate adenylyltransferase; Provisional	NA|548aa|down_5|NC_014391.1_2242375_2244019_+	PRK07564, PRK07564, phosphoglucomutase; Validated	NA|310aa|down_6|NC_014391.1_2244025_2244955_-	COG0061, nadF, NAD kinase [Coenzyme metabolism]	NA|289aa|down_7|NC_014391.1_2245076_2245943_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|353aa|down_8|NC_014391.1_2245939_2246998_+	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|197aa|down_9|NC_014391.1_2247042_2247633_-	pfam02397, Bac_transf, Bacterial sugar transferase
GCF_000145235.1_ASM14523v1	NC_014391	Micromonospora aurantiaca ATCC 27029, complete sequence	4	2469976-2470072	4	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	Orphan	GTGGAACGCCGTGGGTGTCTCGCG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	NA|206aa|up_8|NC_014391.1_2461202_2461820_+,NA|102aa|up_6|NC_014391.1_2462460_2462766_+,NA	NA|472aa|up_9|NC_014391.1_2458258_2459674_+	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|206aa|up_8|NC_014391.1_2461202_2461820_+	NA	NA|154aa|up_7|NC_014391.1_2461966_2462428_+	pfam06103, DUF948, Bacterial protein of unknown function (DUF948)	NA|102aa|up_6|NC_014391.1_2462460_2462766_+	NA	NA|894aa|up_5|NC_014391.1_2462762_2465444_+	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|154aa|up_4|NC_014391.1_2465628_2466090_+	pfam03652, RuvX, Holliday junction resolvase	NA|400aa|up_3|NC_014391.1_2466086_2467286_+	pfam02618, YceG, YceG-like family	NA|271aa|up_2|NC_014391.1_2467285_2468098_+	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed	NA|393aa|up_1|NC_014391.1_2468256_2469435_+	PRK05382, PRK05382, chorismate synthase; Validated	NA|170aa|up_0|NC_014391.1_2469431_2469941_+	PRK00131, aroK, shikimate kinase; Reviewed	NA|267aa|down_0|NC_014391.1_2470156_2470957_-	pfam09678, Caa3_CtaG, Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)	NA|181aa|down_1|NC_014391.1_2470953_2471496_-	pfam10002, DUF2243, Predicted membrane protein (DUF2243)	NA|359aa|down_2|NC_014391.1_2471588_2472665_+	PRK00002, aroB, 3-dehydroquinate synthase; Reviewed	NA|147aa|down_3|NC_014391.1_2472661_2473102_+	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase	NA|186aa|down_4|NC_014391.1_2473188_2473746_+	PRK00529, PRK00529, elongation factor P; Validated	NA|137aa|down_5|NC_014391.1_2473769_2474180_+	TIGR01951, nusB, transcription antitermination factor NusB	NA|163aa|down_6|NC_014391.1_2474242_2474731_-	cd16837, BldD_C_like, C-terminal domain of BldD and similar transcription factors	NA|194aa|down_7|NC_014391.1_2475017_2475599_+	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA|309aa|down_8|NC_014391.1_2475657_2476584_+	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit	NA|439aa|down_9|NC_014391.1_2476580_2477897_+	PRK09357, pyrC, dihydroorotase; Validated
GCF_000145235.1_ASM14523v1	NC_014391	Micromonospora aurantiaca ATCC 27029, complete sequence	5	4400743-4400831	5	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	Orphan	GTCGGCGGCCGTGCGCCGGACCG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	NA|419aa|up_4|NC_014391.1_4391768_4393025_-,NA|293aa|down_1|NC_014391.1_4423228_4424107_+	NA|247aa|up_9|NC_014391.1_4386233_4386974_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|454aa|up_8|NC_014391.1_4387038_4388400_-	TIGR00508, hypothetical_protein_DESPIG_00326, adenosylmethionine-8-amino-7-oxononanoate transaminase	NA|413aa|up_7|NC_014391.1_4388595_4389834_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|329aa|up_6|NC_014391.1_4389917_4390904_+	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit	NA|267aa|up_5|NC_014391.1_4390900_4391701_+	pfam01061, ABC2_membrane, ABC-2 type transporter	NA|419aa|up_4|NC_014391.1_4391768_4393025_-	NA	NA|398aa|up_3|NC_014391.1_4393204_4394398_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|412aa|up_2|NC_014391.1_4394394_4395630_-	COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]	NA|83aa|up_1|NC_014391.1_4395626_4395875_-	pfam00550, PP-binding, Phosphopantetheine attachment site	NA|312aa|up_0|NC_014391.1_4395871_4396807_-	pfam18238, LnmK_N_HDF, LnmK N-terminal Hot Dog Fold domain	NA|2006aa|down_0|NC_014391.1_4417012_4423030_-	cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations	NA|293aa|down_1|NC_014391.1_4423228_4424107_+	NA	NA|253aa|down_2|NC_014391.1_4424113_4424872_+	PRK07112, PRK07112, enoyl-CoA hydratase/isomerase	NA|736aa|down_3|NC_014391.1_4424868_4427076_+	cd04742, NPD_FabD, 2-Nitropropane dioxygenase (NPD)-like domain, associated with the (acyl-carrier-protein) S-malonyltransferase  FabD	NA|254aa|down_4|NC_014391.1_4427630_4428392_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|427aa|down_5|NC_014391.1_4428388_4429669_+	PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional	NA|180aa|down_6|NC_014391.1_4429680_4430220_-	pfam08002, DUF1697, Protein of unknown function (DUF1697)	NA|414aa|down_7|NC_014391.1_4430346_4431588_+	COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]	NA|495aa|down_8|NC_014391.1_4431611_4433096_+	COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|138aa|down_9|NC_014391.1_4433239_4433653_+	pfam14079, DUF4260, Domain of unknown function (DUF4260)
GCF_000145235.1_ASM14523v1	NC_014391	Micromonospora aurantiaca ATCC 27029, complete sequence	6	5375044-5375140	6	CRISPRCasFinder	no	csa3	csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	Type I-A	TCCGGGCCTACCGGGACGGGCGACG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	NA|128aa|up_5|NC_014391.1_5371435_5371819_-,NA|228aa|up_4|NC_014391.1_5371934_5372618_+,NA|145aa|up_0|NC_014391.1_5374405_5374840_+,NA|172aa|down_2|NC_014391.1_5376983_5377499_-,NA|131aa|down_3|NC_014391.1_5377575_5377968_+,NA|129aa|down_7|NC_014391.1_5383947_5384334_+	NA|152aa|up_9|NC_014391.1_5368918_5369374_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|310aa|up_8|NC_014391.1_5369566_5370496_-	TIGR03560, F420_Rv1855c, probable F420-dependent oxidoreductase, Rv1855c family	csa3|103aa|up_7|NC_014391.1_5370583_5370892_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|177aa|up_6|NC_014391.1_5370895_5371426_+	cd08899, SRPBCC_CalC_Aha1-like_6, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins	NA|128aa|up_5|NC_014391.1_5371435_5371819_-	NA	NA|228aa|up_4|NC_014391.1_5371934_5372618_+	NA	NA|254aa|up_3|NC_014391.1_5372649_5373411_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|156aa|up_2|NC_014391.1_5373569_5374037_+	cd08895, SRPBCC_CalC_Aha1-like_2, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins	NA|103aa|up_1|NC_014391.1_5374087_5374396_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|145aa|up_0|NC_014391.1_5374405_5374840_+	NA	NA|169aa|down_0|NC_014391.1_5375416_5375923_-	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family	NA|264aa|down_1|NC_014391.1_5376059_5376851_+	pfam02522, Antibiotic_NAT, Aminoglycoside 3-N-acetyltransferase	NA|172aa|down_2|NC_014391.1_5376983_5377499_-	NA	NA|131aa|down_3|NC_014391.1_5377575_5377968_+	NA	NA|225aa|down_4|NC_014391.1_5378312_5378987_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|412aa|down_5|NC_014391.1_5380067_5381303_-	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase	NA|712aa|down_6|NC_014391.1_5381295_5383431_-	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|129aa|down_7|NC_014391.1_5383947_5384334_+	NA	NA|395aa|down_8|NC_014391.1_5384430_5385615_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|337aa|down_9|NC_014391.1_5385619_5386630_-	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]
GCF_000145235.1_ASM14523v1	NC_014391	Micromonospora aurantiaca ATCC 27029, complete sequence	7	5509728-5510009	1	CRT	no		csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	Orphan	GCCNNNGCCGGGNNNGCC	18	0	0	NA	NA	NA	5	5	Orphan	csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	NA|220aa|up_7|NC_014391.1_5499772_5500432_+,NA|146aa|down_0|NC_014391.1_5510787_5511225_-	NA|262aa|up_9|NC_014391.1_5498228_5499014_-	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated	NA|155aa|up_8|NC_014391.1_5499222_5499687_+	pfam14325, DUF4383, Domain of unknown function (DUF4383)	NA|220aa|up_7|NC_014391.1_5499772_5500432_+	NA	NA|150aa|up_6|NC_014391.1_5500435_5500885_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|484aa|up_5|NC_014391.1_5500944_5502396_-	PRK12296, obgE, GTPase CgtA; Reviewed	NA|85aa|up_4|NC_014391.1_5502486_5502741_-	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|105aa|up_3|NC_014391.1_5502752_5503067_-	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|1093aa|up_2|NC_014391.1_5503369_5506648_-	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family	NA|240aa|up_1|NC_014391.1_5506778_5507498_-	TIGR03936, radical_SAM-linked_protein, radical SAM-linked protein	NA|487aa|up_0|NC_014391.1_5507827_5509288_-	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin	NA|146aa|down_0|NC_014391.1_5510787_5511225_-	NA	NA|662aa|down_1|NC_014391.1_5511395_5513381_-	TIGR03960, radical_SAM_domain_protein, radical SAM family uncharacterized protein	NA|623aa|down_2|NC_014391.1_5513586_5515455_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|236aa|down_3|NC_014391.1_5515459_5516167_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|1049aa|down_4|NC_014391.1_5516324_5519471_-	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|520aa|down_5|NC_014391.1_5519869_5521429_-	COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]	NA|147aa|down_6|NC_014391.1_5521624_5522065_+	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|142aa|down_7|NC_014391.1_5522126_5522552_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|445aa|down_8|NC_014391.1_5522697_5524032_+	cd06587, VOC, vicinal oxygen chelate (VOC) family	NA|117aa|down_9|NC_014391.1_5524104_5524455_-	pfam14017, DUF4233, Protein of unknown function (DUF4233)
GCF_000145235.1_ASM14523v1	NC_014391	Micromonospora aurantiaca ATCC 27029, complete sequence	8	6596285-6596468	1	PILER-CR	no		csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	Orphan	GTGGACGCCGACACGCTGGAGACGCTCGACCCGCGGGCGGTACGGC	46	1	1	6596339-6596356	NC_014391.1_6604673-6604656	NA	2	2	Orphan	csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	NA,NA|153aa|down_1|NC_014391.1_6597995_6598454_-,NA|147aa|down_6|NC_014391.1_6603782_6604223_-	NA|226aa|up_9|NC_014391.1_6583114_6583792_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|248aa|up_8|NC_014391.1_6584020_6584764_+	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain	NA|204aa|up_7|NC_014391.1_6584870_6585482_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|265aa|up_6|NC_014391.1_6585514_6586309_+	TIGR03084, conserved_hypothetical_protein, TIGR03084 family protein	NA|559aa|up_5|NC_014391.1_6586305_6587982_+	pfam07287, AtuA, Acyclic terpene utilisation family protein AtuA	NA|380aa|up_4|NC_014391.1_6587978_6589118_+	cd01160, LCAD, Long chain acyl-CoA dehydrogenase	NA|536aa|up_3|NC_014391.1_6589114_6590722_+	PLN02820, PLN02820, 3-methylcrotonyl-CoA carboxylase, beta chain	NA|672aa|up_2|NC_014391.1_6590790_6592806_+	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|388aa|up_1|NC_014391.1_6592802_6593966_+	cd00567, ACAD, Acyl-CoA dehydrogenase	NA|593aa|up_0|NC_014391.1_6594024_6595803_-	pfam08386, Abhydrolase_4, TAP-like protein	NA|492aa|down_0|NC_014391.1_6596489_6597965_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|153aa|down_1|NC_014391.1_6597995_6598454_-	NA	NA|1194aa|down_2|NC_014391.1_6598589_6602171_-	cd07302, CHD, cyclase homology domain	NA|261aa|down_3|NC_014391.1_6602167_6602950_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|154aa|down_4|NC_014391.1_6603097_6603559_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|52aa|down_5|NC_014391.1_6603564_6603720_-	pfam13783, DUF4177, Domain of unknown function (DUF4177)	NA|147aa|down_6|NC_014391.1_6603782_6604223_-	NA	NA|193aa|down_7|NC_014391.1_6604558_6605137_+	COG5178, PRP8, U5 snRNP spliceosome subunit [RNA processing and modification]	NA|325aa|down_8|NC_014391.1_6605186_6606161_+	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|383aa|down_9|NC_014391.1_6606215_6607364_+	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
GCF_000145235.1_ASM14523v1	NC_014391	Micromonospora aurantiaca ATCC 27029, complete sequence	9	7022363-7022456	7	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	Orphan	CCGCCTGCTCGCCGGAGAAGGCGGG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,PD-DExK,RT,cas4,c2c9_V-U4,DinG	NA|222aa|up_6|NC_014391.1_7012824_7013490_-,NA	NA|318aa|up_9|NC_014391.1_7010177_7011131_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|108aa|up_8|NC_014391.1_7011169_7011493_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|387aa|up_7|NC_014391.1_7011655_7012816_+	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3	NA|222aa|up_6|NC_014391.1_7012824_7013490_-	NA	NA|438aa|up_5|NC_014391.1_7013772_7015086_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|332aa|up_4|NC_014391.1_7015093_7016089_+	PRK01372, ddl, D-alanine--D-alanine ligase; Reviewed	NA|288aa|up_3|NC_014391.1_7016091_7016955_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|347aa|up_2|NC_014391.1_7018881_7019922_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|269aa|up_1|NC_014391.1_7019949_7020756_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|238aa|up_0|NC_014391.1_7021532_7022246_-	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|197aa|down_0|NC_014391.1_7022626_7023217_-	COG1847, Jag, Predicted RNA-binding protein [General function prediction only]	NA|334aa|down_1|NC_014391.1_7023427_7024429_-	PRK01315, PRK01315, putative inner membrane protein translocase component YidC; Provisional	NA|80aa|down_2|NC_014391.1_7024429_7024669_-	pfam01809, Haemolytic, Haemolytic domain	NA|138aa|down_3|NC_014391.1_7024710_7025124_-	pfam00825, Ribonuclease_P, Ribonuclease P	NA|46aa|down_4|NC_014391.1_7025158_7025296_-	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
