assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000148425.1_ASM14842v1	NC_014538	Thermoanaerobacter sp. X513, complete sequence	1	878513-878711	1	PILER-CR	no	csa3	RT,csa3,cas14k,csx1,csx20,cas10,csm3gr7,csx19,cas3,DEDDh,Cas14b_CAS-V-F,cas4,cas2,cas1,cas5,cas7b,cas8b1,cas6	Type I-A	ATAGCTCAGTTGGTAGAGCAACACCCTGCCAAGCTG	36	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,cas14k,csx1,csx20,cas10,csm3gr7,csx19,cas3,DEDDh,Cas14b_CAS-V-F,cas4,cas2,cas1,cas5,cas7b,cas8b1,cas6	NA|57aa|up_3|NC_014538.1_876137_876308_+,NA|245aa|down_2|NC_014538.1_880384_881119_+	csa3|108aa|up_9|NC_014538.1_871187_871511_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|465aa|up_8|NC_014538.1_871851_873246_+	PRK07318, PRK07318, dipeptidase PepV; Reviewed	NA|258aa|up_7|NC_014538.1_873818_874592_+	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed	NA|155aa|up_6|NC_014538.1_874808_875273_+	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms]	NA|74aa|up_5|NC_014538.1_875326_875548_+	pfam01106, NifU, NifU-like domain	NA|48aa|up_4|NC_014538.1_875653_875797_+	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain	NA|57aa|up_3|NC_014538.1_876137_876308_+	NA	NA|249aa|up_2|NC_014538.1_876333_877080_+	cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|68aa|up_1|NC_014538.1_877155_877359_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|295aa|up_0|NC_014538.1_877419_878304_+	PRK00114, hslO, Hsp33 family molecular chaperone HslO	NA|112aa|down_0|NC_014538.1_878935_879271_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|311aa|down_1|NC_014538.1_879393_880326_+	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]	NA|245aa|down_2|NC_014538.1_880384_881119_+	NA	NA|293aa|down_3|NC_014538.1_881174_882053_+	pfam08812, YtxC, YtxC-like family	NA|200aa|down_4|NC_014538.1_882137_882737_+	COG4399, COG4399, Uncharacterized protein conserved in bacteria [Function unknown]	NA|635aa|down_5|NC_014538.1_883034_884939_+	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|414aa|down_6|NC_014538.1_885041_886283_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|351aa|down_7|NC_014538.1_886294_887347_+	PRK05382, PRK05382, chorismate synthase; Validated	NA|184aa|down_8|NC_014538.1_887607_888159_+	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|66aa|down_9|NC_014538.1_888186_888384_+	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed
GCF_000148425.1_ASM14842v1	NC_014538	Thermoanaerobacter sp. X513, complete sequence	2	2149186-2149615	1,1,2	CRT,CRISPRCasFinder,PILER-CR	no	RT	RT,csa3,cas14k,csx1,csx20,cas10,csm3gr7,csx19,cas3,DEDDh,Cas14b_CAS-V-F,cas4,cas2,cas1,cas5,cas7b,cas8b1,cas6	Unclear	TTTCAATCCCTTATAGGTAAGCTAAAAAC,GTTTCAATCCCTTATAGGTAAGCTAAAAAC,TTTCAATCCCTTATAGGTAAGCTAAAAAC	29,30,29	0	0	NA	NA	NA:NA:NA	6,5,5	6	Orphan	RT,csa3,cas14k,csx1,csx20,cas10,csm3gr7,csx19,cas3,DEDDh,Cas14b_CAS-V-F,cas4,cas2,cas1,cas5,cas7b,cas8b1,cas6	NA|64aa|up_7|NC_014538.1_2142807_2142999_-,NA|191aa|up_4|NC_014538.1_2145130_2145703_+,NA|47aa|up_3|NC_014538.1_2145968_2146109_-,NA|184aa|up_2|NC_014538.1_2146444_2146996_-,NA|103aa|down_4|NC_014538.1_2155411_2155720_-,NA|59aa|down_5|NC_014538.1_2155988_2156165_-,NA|129aa|down_8|NC_014538.1_2157747_2158134_-	NA|263aa|up_9|NC_014538.1_2140110_2140899_+	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	NA|79aa|up_8|NC_014538.1_2142585_2142822_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|64aa|up_7|NC_014538.1_2142807_2142999_-	NA	NA|221aa|up_6|NC_014538.1_2143012_2143675_-	pfam13630, SdpI, SdpI/YfhL protein family	NA|100aa|up_5|NC_014538.1_2143760_2144060_-	pfam11213, DUF3006, Protein of unknown function (DUF3006)	NA|191aa|up_4|NC_014538.1_2145130_2145703_+	NA	NA|47aa|up_3|NC_014538.1_2145968_2146109_-	NA	NA|184aa|up_2|NC_014538.1_2146444_2146996_-	NA	NA|478aa|up_1|NC_014538.1_2147418_2148852_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|57aa|up_0|NC_014538.1_2148939_2149110_-	TIGR03769, P_ac_wall_RPT, actinobacterial surface-anchored protein domain	NA|558aa|down_0|NC_014538.1_2150386_2152060_-	TIGR03743, SXT_TraD, conjugative coupling factor TraD, SXT/TOL subfamily	NA|208aa|down_1|NC_014538.1_2152028_2152652_-	pfam13814, Replic_Relax, Replication-relaxation	NA|362aa|down_2|NC_014538.1_2153136_2154222_-	TIGR04474, conserved_hypothetical_protein, three-Cys-motif partner protein	NA|283aa|down_3|NC_014538.1_2154343_2155192_-	cd01335, Radical_SAM, Radical SAM superfamily	NA|103aa|down_4|NC_014538.1_2155411_2155720_-	NA	NA|59aa|down_5|NC_014538.1_2155988_2156165_-	NA	NA|343aa|down_6|NC_014538.1_2156178_2157207_-	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins	NA|173aa|down_7|NC_014538.1_2157199_2157718_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|129aa|down_8|NC_014538.1_2157747_2158134_-	NA	NA|1090aa|down_9|NC_014538.1_2158130_2161400_-	pfam01471, PG_binding_1, Putative peptidoglycan binding domain
GCF_000148425.1_ASM14842v1	NC_014538	Thermoanaerobacter sp. X513, complete sequence	3	2340499-2341198	2,2,3	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4	RT,csa3,cas14k,csx1,csx20,cas10,csm3gr7,csx19,cas3,DEDDh,Cas14b_CAS-V-F,cas4,cas2,cas1,cas5,cas7b,cas8b1,cas6	Unclear	GTTTCAATTCCTTATAGGTAGGCTAAAAAC,GTTTCAATTCCTTATAGGTAGGCTAAAAAC,GTTTCAATTCCTTATAGGTAGGCTAAAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	10,10,9	10	Unclear	RT,csa3,cas14k,csx1,csx20,cas10,csm3gr7,csx19,cas3,DEDDh,Cas14b_CAS-V-F,cas4,cas2,cas1,cas5,cas7b,cas8b1,cas6	NA,NA	NA|1777aa|up_9|NC_014538.1_2323597_2328928_-	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases	NA|309aa|up_8|NC_014538.1_2329377_2330304_-	PRK01212, PRK01212, homoserine kinase; Provisional	NA|352aa|up_7|NC_014538.1_2330293_2331349_-	PRK07409, PRK07409, threonine synthase; Validated	NA|419aa|up_6|NC_014538.1_2331352_2332609_-	PRK06349, PRK06349, homoserine dehydrogenase; Provisional	NA|147aa|up_5|NC_014538.1_2332621_2333062_-	PRK04435, PRK04435, ACT domain-containing protein	NA|260aa|up_4|NC_014538.1_2333268_2334048_-	cd07733, YycJ-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain	cas2|88aa|up_3|NC_014538.1_2336354_2336618_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|up_2|NC_014538.1_2336634_2337627_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|166aa|up_1|NC_014538.1_2337623_2338121_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	NA|243aa|up_0|NC_014538.1_2338326_2339055_-	cd03146, GAT1_Peptidase_E, Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E	NA|407aa|down_0|NC_014538.1_2341523_2342744_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|407aa|down_1|NC_014538.1_2347290_2348511_+	pfam01548, DEDD_Tnp_IS110, Transposase	cas3|779aa|down_2|NC_014538.1_2362426_2364763_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|237aa|down_3|NC_014538.1_2364777_2365488_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7b|294aa|down_4|NC_014538.1_2365502_2366384_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|661aa|down_5|NC_014538.1_2366370_2368353_-	cd09730, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas6|252aa|down_6|NC_014538.1_2368407_2369163_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|138aa|down_7|NC_014538.1_2369351_2369765_-	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|410aa|down_8|NC_014538.1_2369761_2370991_-	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|350aa|down_9|NC_014538.1_2370987_2372037_-	TIGR01981, UPF0051_protein_Rv1462/MT1509, FeS assembly protein SufD
GCF_000148425.1_ASM14842v1	NC_014538	Thermoanaerobacter sp. X513, complete sequence	4	2342830-2346967	3,4,3	CRT,PILER-CR,CRISPRCasFinder	no	cas2,cas1,cas4,cas3,cas5,cas7b	RT,csa3,cas14k,csx1,csx20,cas10,csm3gr7,csx19,cas3,DEDDh,Cas14b_CAS-V-F,cas4,cas2,cas1,cas5,cas7b,cas8b1,cas6	Unclear	GTTTCAATTCCTTATAGGTAGGCTAAAAAC,GTTTCAATTCCTTATAGGTAGGCTAAAAAC,GTTTCAATTCCTTATAGGTAGGCTAAAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	62,61,61	62	Unclear	RT,csa3,cas14k,csx1,csx20,cas10,csm3gr7,csx19,cas3,DEDDh,Cas14b_CAS-V-F,cas4,cas2,cas1,cas5,cas7b,cas8b1,cas6	NA,NA	NA|309aa|up_9|NC_014538.1_2329377_2330304_-	PRK01212, PRK01212, homoserine kinase; Provisional	NA|352aa|up_8|NC_014538.1_2330293_2331349_-	PRK07409, PRK07409, threonine synthase; Validated	NA|419aa|up_7|NC_014538.1_2331352_2332609_-	PRK06349, PRK06349, homoserine dehydrogenase; Provisional	NA|147aa|up_6|NC_014538.1_2332621_2333062_-	PRK04435, PRK04435, ACT domain-containing protein	NA|260aa|up_5|NC_014538.1_2333268_2334048_-	cd07733, YycJ-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain	cas2|88aa|up_4|NC_014538.1_2336354_2336618_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|up_3|NC_014538.1_2336634_2337627_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|166aa|up_2|NC_014538.1_2337623_2338121_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	NA|243aa|up_1|NC_014538.1_2338326_2339055_-	cd03146, GAT1_Peptidase_E, Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E	NA|407aa|up_0|NC_014538.1_2341523_2342744_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|407aa|down_0|NC_014538.1_2347290_2348511_+	pfam01548, DEDD_Tnp_IS110, Transposase	cas3|779aa|down_1|NC_014538.1_2362426_2364763_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|237aa|down_2|NC_014538.1_2364777_2365488_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7b|294aa|down_3|NC_014538.1_2365502_2366384_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|661aa|down_4|NC_014538.1_2366370_2368353_-	cd09730, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas6|252aa|down_5|NC_014538.1_2368407_2369163_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|138aa|down_6|NC_014538.1_2369351_2369765_-	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|410aa|down_7|NC_014538.1_2369761_2370991_-	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|350aa|down_8|NC_014538.1_2370987_2372037_-	TIGR01981, UPF0051_protein_Rv1462/MT1509, FeS assembly protein SufD	NA|468aa|down_9|NC_014538.1_2372047_2373451_-	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB
GCF_000148425.1_ASM14842v1	NC_014538	Thermoanaerobacter sp. X513, complete sequence	5	2348597-2362246	4,4,5	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6	RT,csa3,cas14k,csx1,csx20,cas10,csm3gr7,csx19,cas3,DEDDh,Cas14b_CAS-V-F,cas4,cas2,cas1,cas5,cas7b,cas8b1,cas6	Type I-B	GTTTCAATTCCTTATAGGTAGGCTAAAAAC,GTTTCAATTCCTTATAGGTAGGCTAAAAAC,GTTTCAATTCCTTATAGGTAGGCTAAAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	205,205,204	205	TypeI-B	RT,csa3,cas14k,csx1,csx20,cas10,csm3gr7,csx19,cas3,DEDDh,Cas14b_CAS-V-F,cas4,cas2,cas1,cas5,cas7b,cas8b1,cas6	NA,NA	NA|352aa|up_9|NC_014538.1_2330293_2331349_-	PRK07409, PRK07409, threonine synthase; Validated	NA|419aa|up_8|NC_014538.1_2331352_2332609_-	PRK06349, PRK06349, homoserine dehydrogenase; Provisional	NA|147aa|up_7|NC_014538.1_2332621_2333062_-	PRK04435, PRK04435, ACT domain-containing protein	NA|260aa|up_6|NC_014538.1_2333268_2334048_-	cd07733, YycJ-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain	cas2|88aa|up_5|NC_014538.1_2336354_2336618_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|331aa|up_4|NC_014538.1_2336634_2337627_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|166aa|up_3|NC_014538.1_2337623_2338121_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	NA|243aa|up_2|NC_014538.1_2338326_2339055_-	cd03146, GAT1_Peptidase_E, Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E	NA|407aa|up_1|NC_014538.1_2341523_2342744_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|407aa|up_0|NC_014538.1_2347290_2348511_+	pfam01548, DEDD_Tnp_IS110, Transposase	cas3|779aa|down_0|NC_014538.1_2362426_2364763_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|237aa|down_1|NC_014538.1_2364777_2365488_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7b|294aa|down_2|NC_014538.1_2365502_2366384_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|661aa|down_3|NC_014538.1_2366370_2368353_-	cd09730, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas6|252aa|down_4|NC_014538.1_2368407_2369163_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|138aa|down_5|NC_014538.1_2369351_2369765_-	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|410aa|down_6|NC_014538.1_2369761_2370991_-	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|350aa|down_7|NC_014538.1_2370987_2372037_-	TIGR01981, UPF0051_protein_Rv1462/MT1509, FeS assembly protein SufD	NA|468aa|down_8|NC_014538.1_2372047_2373451_-	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|249aa|down_9|NC_014538.1_2373470_2374217_-	TIGR01978, Probable_ATP-dependent_transporter_SufC, FeS assembly ATPase SufC
