assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000163055.2_ASM16305v2	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	1	212-302	1	CRISPRCasFinder	no		cas3,DEDDh	Orphan	TCTTTTATTGCGTTCGGCTTGCGCT	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,PD-DExK,WYL	NA,NA|234aa|down_2|NC_022111.1_2307_3009_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|255aa|down_0|NC_022111.1_381_1146_+	pfam13614, AAA_31, AAA domain	NA|303aa|down_1|NC_022111.1_1216_2125_+	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|234aa|down_2|NC_022111.1_2307_3009_+	NA	NA|454aa|down_3|NC_022111.1_3016_4378_+	cd16894, MltD-like, Membrane-bound lytic murein transglycosylase D and similar proteins	NA|754aa|down_4|NC_022111.1_4601_6863_+	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|820aa|down_5|NC_022111.1_7284_9744_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|289aa|down_6|NC_022111.1_9867_10734_-	pfam01148, CTP_transf_1, Cytidylyltransferase family	NA|681aa|down_7|NC_022111.1_10827_12870_-	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|120aa|down_8|NC_022111.1_12919_13279_-	pfam02410, RsfS, Ribosomal silencing factor during starvation	NA|631aa|down_9|NC_022111.1_13973_15866_-	pfam03993, DUF349, Domain of Unknown Function (DUF349)
GCF_000163055.2_ASM16305v2	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	2	1224392-1224484	2	CRISPRCasFinder	no	DEDDh	cas3,DEDDh	Unclear	TTTATTCGCAGTTTATGCTACTTTCGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,PD-DExK,WYL	NA|106aa|up_8|NC_022111.1_1215641_1215959_+,NA|66aa|up_7|NC_022111.1_1216739_1216937_+,NA|105aa|up_6|NC_022111.1_1219790_1220105_-,NA|147aa|up_5|NC_022111.1_1220359_1220800_+,NA|66aa|up_3|NC_022111.1_1221449_1221647_-,NA|194aa|up_1|NC_022111.1_1222403_1222985_-,NA	NA|156aa|up_9|NC_022111.1_1214546_1215014_+	pfam18291, HU-HIG, HU domain fused to wHTH, Ig, or Glycine-rich motif	NA|106aa|up_8|NC_022111.1_1215641_1215959_+	NA	NA|66aa|up_7|NC_022111.1_1216739_1216937_+	NA	NA|105aa|up_6|NC_022111.1_1219790_1220105_-	NA	NA|147aa|up_5|NC_022111.1_1220359_1220800_+	NA	NA|159aa|up_4|NC_022111.1_1220812_1221289_+	pfam08291, Peptidase_M15_3, Peptidase M15	NA|66aa|up_3|NC_022111.1_1221449_1221647_-	NA	NA|187aa|up_2|NC_022111.1_1221662_1222223_-	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain	NA|194aa|up_1|NC_022111.1_1222403_1222985_-	NA	NA|369aa|up_0|NC_022111.1_1223171_1224278_-	COG4748, COG4748, Uncharacterized conserved protein [Function unknown]	NA|302aa|down_0|NC_022111.1_1226219_1227125_-	pfam16119, DUF4835, Domain of unknown function (DUF4835)	NA|408aa|down_1|NC_022111.1_1227324_1228548_-	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	DEDDh|286aa|down_2|NC_022111.1_1228697_1229555_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|375aa|down_3|NC_022111.1_1229557_1230682_-	cd00140, beta_clamp, Beta clamp domain	NA|137aa|down_4|NC_022111.1_1230861_1231272_+	pfam11325, DUF3127, Domain of unknown function (DUF3127)	NA|939aa|down_5|NC_022111.1_1231933_1234750_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|551aa|down_6|NC_022111.1_1235179_1236832_-	cd06563, GH20_chitobiase-like, The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin	NA|796aa|down_7|NC_022111.1_1237324_1239712_-	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]	NA|436aa|down_8|NC_022111.1_1239885_1241193_-	PRK00077, eno, enolase; Provisional	NA|442aa|down_9|NC_022111.1_1241350_1242676_+	PRK14329, PRK14329, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
GCF_000163055.2_ASM16305v2	NC_022124	Prevotella sp. oral taxon 299 str. F0039, complete genome	1	279307-279382	1	CRISPRCasFinder	no		PD-DExK,WYL,DEDDh	Orphan	GTAACATCCTCATAAAATAGGAT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,PD-DExK,WYL	NA|344aa|up_4|NC_022124.1_270244_271276_+,NA|337aa|up_0|NC_022124.1_278287_279298_+,NA	NA|270aa|up_9|NC_022124.1_264242_265052_+	cd07331, M48C_Oma1_like, Peptidase M48C, integral membrane endopeptidase	NA|655aa|up_8|NC_022124.1_265531_267496_+	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|231aa|up_7|NC_022124.1_267671_268364_+	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|66aa|up_6|NC_022124.1_268444_268642_+	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|115aa|up_5|NC_022124.1_268679_269024_+	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|344aa|up_4|NC_022124.1_270244_271276_+	NA	NA|645aa|up_3|NC_022124.1_271779_273714_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|680aa|up_2|NC_022124.1_273835_275875_+	cd08662, M13, Peptidase family M13 includes neprilysin and endothelin-converting enzyme I	NA|616aa|up_1|NC_022124.1_276453_278301_+	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|337aa|up_0|NC_022124.1_278287_279298_+	NA	NA|689aa|down_0|NC_022124.1_279444_281511_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|392aa|down_1|NC_022124.1_281590_282766_+	cd17485, MFS_MFSD3, Major facilitator superfamily domain containing 3 protein	NA|457aa|down_2|NC_022124.1_282746_284117_+	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|464aa|down_3|NC_022124.1_284117_285509_+	TIGR00562, Protoporphyrinogen_oxidase, protoporphyrinogen oxidase	NA|356aa|down_4|NC_022124.1_285644_286712_+	TIGR01361, DAHP_synth_Bsub, 3-deoxy-7-phosphoheptulonate synthase	NA|205aa|down_5|NC_022124.1_287024_287639_+	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|2523aa|down_6|NC_022124.1_287635_295204_+	TIGR04189, gliding_motility-related_protein, cell surface protein SprA	NA|271aa|down_7|NC_022124.1_295377_296190_+	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system	NA|331aa|down_8|NC_022124.1_296201_297194_+	pfam14491, DUF4435, Protein of unknown function (DUF4435)	NA|159aa|down_9|NC_022124.1_297282_297759_-	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain
GCF_000163055.2_ASM16305v2	NC_022124	Prevotella sp. oral taxon 299 str. F0039, complete genome	2	330956-331104	2	CRISPRCasFinder	no		PD-DExK,WYL,DEDDh	Orphan	GAGATACATCTAAACTTGCTATT	23	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,PD-DExK,WYL	NA|168aa|up_3|NC_022124.1_325656_326160_-,NA|600aa|down_0|NC_022124.1_333590_335390_+,NA|138aa|down_1|NC_022124.1_335660_336074_+	NA|633aa|up_9|NC_022124.1_318430_320329_-	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	NA|304aa|up_8|NC_022124.1_320592_321504_-	cd09083, EEP-1, Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1	NA|215aa|up_7|NC_022124.1_321547_322192_-	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane]	NA|446aa|up_6|NC_022124.1_322215_323553_-	PRK14030, PRK14030, glutamate dehydrogenase; Provisional	NA|156aa|up_5|NC_022124.1_324661_325129_-	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR	NA|177aa|up_4|NC_022124.1_325125_325656_-	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR	NA|168aa|up_3|NC_022124.1_325656_326160_-	NA	NA|280aa|up_2|NC_022124.1_326146_326986_-	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family	NA|387aa|up_1|NC_022124.1_327289_328450_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|586aa|up_0|NC_022124.1_328638_330396_+	COG4866, COG4866, Uncharacterized conserved protein [Function unknown]	NA|600aa|down_0|NC_022124.1_333590_335390_+	NA	NA|138aa|down_1|NC_022124.1_335660_336074_+	NA	NA|424aa|down_2|NC_022124.1_336060_337332_+	TIGR00666, D-alanyl-D-alanine_carboxypeptidase_DacB, D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family	NA|391aa|down_3|NC_022124.1_337379_338552_+	pfam00924, MS_channel, Mechanosensitive ion channel	NA|515aa|down_4|NC_022124.1_338936_340481_+	COG2461, COG2461, Uncharacterized conserved protein [Function unknown]	NA|407aa|down_5|NC_022124.1_340664_341885_-	TIGR03952, conserved_hypothetical_protein, zinc-dependent metalloproteinase lipoprotein, BF0631 family	NA|487aa|down_6|NC_022124.1_341961_343422_-	cd08977, SusD, starch binding outer membrane protein SusD	NA|165aa|down_7|NC_022124.1_347188_347683_+	PRK09267, PRK09267, flavodoxin FldA; Validated	NA|75aa|down_8|NC_022124.1_354788_355013_+	COG1198, PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]	NA|196aa|down_9|NC_022124.1_355005_355593_+	pfam03167, UDG, Uracil DNA glycosylase superfamily
