assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000172575.2_ASM17257v2	NC_017316	Enterococcus faecalis OG1RF, complete genome	1	422486-422984	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2,csn2	WYL,csa3,cas3,cas9,cas1,cas2,csn2,cas14j,DinG,DEDDh	Type II-B,Type II-A,Type II-C	GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT,GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT,GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	37,37,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B	7,7,3	7	TypeII-B,TypeII-A,TypeII-C	WYL,csa3,cas3,cas9,cas1,cas2,csn2,cas14j,DinG,DEDDh	NA|78aa|up_4|NC_017316.1_415820_416054_+,NA	NA|191aa|up_9|NC_017316.1_409265_409838_+	COG0400, COG0400, Predicted esterase [General function prediction only]	NA|509aa|up_8|NC_017316.1_409904_411431_-	PRK14022, PRK14022, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase	NA|550aa|up_7|NC_017316.1_411634_413284_+	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins	NA|258aa|up_6|NC_017316.1_413353_414127_+	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|472aa|up_5|NC_017316.1_414260_415676_+	TIGR01886, Beta-Ala-Xaa_dipeptidase, dipeptidase PepV	NA|78aa|up_4|NC_017316.1_415820_416054_+	NA	cas9|1338aa|up_3|NC_017316.1_416526_420540_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|289aa|up_2|NC_017316.1_420540_421407_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|110aa|up_1|NC_017316.1_421403_421733_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|220aa|up_0|NC_017316.1_421733_422393_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|338aa|down_0|NC_017316.1_423799_424813_-	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]	NA|317aa|down_1|NC_017316.1_425049_426000_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|506aa|down_2|NC_017316.1_426003_427521_+	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold	NA|152aa|down_3|NC_017316.1_427662_428118_+	COG1438, ArgR, Arginine repressor [Transcription]	NA|503aa|down_4|NC_017316.1_428151_429660_+	PLN02371, PLN02371, phosphoglucosamine mutase family protein	NA|185aa|down_5|NC_017316.1_429683_430238_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|284aa|down_6|NC_017316.1_430361_431213_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|729aa|down_7|NC_017316.1_431567_433754_+	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family	NA|114aa|down_8|NC_017316.1_433816_434158_+	PRK13676, PRK13676, YlbF/YmcA family competence regulator	NA|412aa|down_9|NC_017316.1_434313_435549_+	cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal metallophosphatase domain
GCF_000172575.2_ASM17257v2	NC_017316	Enterococcus faecalis OG1RF, complete genome	2	1738187-1738685	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no		WYL,csa3,cas3,cas9,cas1,cas2,csn2,cas14j,DinG,DEDDh	Orphan	AGTTTTGGTACCATTCTAAACAACATGACTCTAAAAC,GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC,GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	37,36,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B	7,7,6	7	Orphan	WYL,csa3,cas3,cas9,cas1,cas2,csn2,cas14j,DinG,DEDDh	NA|44aa|up_8|NC_017316.1_1728316_1728448_-,NA|33aa|up_0|NC_017316.1_1737940_1738039_-,NA|62aa|down_6|NC_017316.1_1744876_1745062_-	NA|808aa|up_9|NC_017316.1_1725786_1728210_-	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|44aa|up_8|NC_017316.1_1728316_1728448_-	NA	NA|404aa|up_7|NC_017316.1_1728524_1729736_-	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|302aa|up_6|NC_017316.1_1729764_1730670_-	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|327aa|up_5|NC_017316.1_1730791_1731772_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|589aa|up_4|NC_017316.1_1731851_1733618_-	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|578aa|up_3|NC_017316.1_1733614_1735348_-	TIGR02857, transport_ATP-binding_protein, thiol reductant ABC exporter, CydD subunit	NA|338aa|up_2|NC_017316.1_1735352_1736366_-	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II	NA|473aa|up_1|NC_017316.1_1736362_1737781_-	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|33aa|up_0|NC_017316.1_1737940_1738039_-	NA	NA|288aa|down_0|NC_017316.1_1738842_1739706_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|694aa|down_1|NC_017316.1_1739790_1741872_-	PRK07726, PRK07726, DNA topoisomerase 3	NA|122aa|down_2|NC_017316.1_1742002_1742368_-	pfam06279, DUF1033, Protein of unknown function (DUF1033)	NA|190aa|down_3|NC_017316.1_1742465_1743035_-	pfam13305, WHG, WHG domain	NA|172aa|down_4|NC_017316.1_1743167_1743683_+	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|411aa|down_5|NC_017316.1_1743699_1744932_+	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|62aa|down_6|NC_017316.1_1744876_1745062_-	NA	NA|375aa|down_7|NC_017316.1_1745118_1746243_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|115aa|down_8|NC_017316.1_1746468_1746813_-	pfam08866, DUF1831, Putative amino acid metabolism	NA|382aa|down_9|NC_017316.1_1746880_1748026_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
GCF_000172575.2_ASM17257v2	NC_017316	Enterococcus faecalis OG1RF, complete genome	3	2561542-2561615	3	CRISPRCasFinder	no		WYL,csa3,cas3,cas9,cas1,cas2,csn2,cas14j,DinG,DEDDh	Orphan	ATAGTTGGCGAGCAACAGAAAAAC	24	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,cas9,cas1,cas2,csn2,cas14j,DinG,DEDDh	NA|85aa|up_9|NC_017316.1_2550069_2550324_-,NA	NA|85aa|up_9|NC_017316.1_2550069_2550324_-	NA	NA|289aa|up_8|NC_017316.1_2550627_2551494_-	COG1426, COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown]	NA|435aa|up_7|NC_017316.1_2551661_2552966_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|423aa|up_6|NC_017316.1_2552958_2554227_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|150aa|up_5|NC_017316.1_2554435_2554885_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|235aa|up_4|NC_017316.1_2554925_2555630_-	pfam13731, WxL, WxL domain surface cell wall-binding	NA|238aa|up_3|NC_017316.1_2555725_2556439_-	pfam13731, WxL, WxL domain surface cell wall-binding	NA|238aa|up_2|NC_017316.1_2556834_2557548_-	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|915aa|up_1|NC_017316.1_2557809_2560554_+	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]	NA|217aa|up_0|NC_017316.1_2560568_2561219_+	TIGR01990, bPGM, beta-phosphoglucomutase	NA|148aa|down_0|NC_017316.1_2561831_2562275_+	pfam18813, PBECR4, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4	NA|51aa|down_1|NC_017316.1_2562515_2562668_-	pfam16935, Hol_Tox, Putative Holin-like Toxin (Hol-Tox)	NA|324aa|down_2|NC_017316.1_2563656_2564628_-	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|146aa|down_3|NC_017316.1_2564802_2565240_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|185aa|down_4|NC_017316.1_2565372_2565927_-	cd00555, Maf, Nucleotide binding protein Maf	NA|711aa|down_5|NC_017316.1_2565951_2568084_-	COG0323, MutL, DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair]	NA|859aa|down_6|NC_017316.1_2568115_2570692_-	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|124aa|down_7|NC_017316.1_2570692_2571064_-	COG4550, COG4550, Predicted membrane protein [Function unknown]	NA|266aa|down_8|NC_017316.1_2571152_2571950_-	pfam13277, YmdB, YmdB-like protein	NA|519aa|down_9|NC_017316.1_2572109_2573666_-	PRK12704, PRK12704, phosphodiesterase; Provisional
