assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000179635.2_ASM17963v2	NC_014833	Ruminococcus albus 7 = DSM 20455, complete sequence	1	14874-14956	1	CRISPRCasFinder	no		cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	Orphan	AAATGTTCCACGTGGAACAATTTATA	26	0	0	NA	NA	NA	1	1	Orphan	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cas14j	NA|116aa|up_9|NC_014833.1_4753_5101_+,NA|195aa|up_5|NC_014833.1_8110_8695_+,NA|99aa|up_2|NC_014833.1_12648_12945_+,NA|311aa|down_5|NC_014833.1_22266_23199_+	NA|116aa|up_9|NC_014833.1_4753_5101_+	NA	NA|89aa|up_8|NC_014833.1_5122_5389_+	pfam04025, DUF370, Domain of unknown function (DUF370)	NA|663aa|up_7|NC_014833.1_5392_7381_+	PRK05644, gyrB, DNA gyrase subunit B; Validated	NA|235aa|up_6|NC_014833.1_7405_8110_+	pfam13571, DUF4133, Domain of unknown function (DUF4133)	NA|195aa|up_5|NC_014833.1_8110_8695_+	NA	NA|837aa|up_4|NC_014833.1_8814_11325_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|252aa|up_3|NC_014833.1_11830_12586_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|99aa|up_2|NC_014833.1_12648_12945_+	NA	NA|170aa|up_1|NC_014833.1_12907_13417_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|289aa|up_0|NC_014833.1_13822_14689_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|260aa|down_0|NC_014833.1_15103_15883_+	pfam13614, AAA_31, AAA domain	NA|305aa|down_1|NC_014833.1_16190_17105_+	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|883aa|down_2|NC_014833.1_17219_19868_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|286aa|down_3|NC_014833.1_19955_20813_+	COG0169, AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]	NA|390aa|down_4|NC_014833.1_21073_22243_+	cd00249, AGE, AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid	NA|311aa|down_5|NC_014833.1_22266_23199_+	NA	NA|229aa|down_6|NC_014833.1_23248_23935_+	cd07432, PHP_HisPPase, Polymerase and Histidinol Phosphatase domain of Histidinol phosphate phosphatase	NA|407aa|down_7|NC_014833.1_24065_25286_+	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|421aa|down_8|NC_014833.1_25330_26593_+	pfam06245, DUF1015, Protein of unknown function (DUF1015)	NA|788aa|down_9|NC_014833.1_27181_29545_+	pfam08757, CotH, CotH kinase protein
GCF_000179635.2_ASM17963v2	NC_014833	Ruminococcus albus 7 = DSM 20455, complete sequence	2	246698-246810	2	CRISPRCasFinder	no		cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	Orphan	TGACGGAGTCAGAGTCCGTTGCCTTACCGCTTGGC	35	0	0	NA	NA	NA	1	1	Orphan	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cas14j	NA|120aa|up_3|NC_014833.1_242823_243183_-,NA	NA|320aa|up_9|NC_014833.1_236103_237063_-	COG1893, ApbA, Ketopantoate reductase [Coenzyme metabolism]	NA|298aa|up_8|NC_014833.1_237223_238117_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|295aa|up_7|NC_014833.1_238131_239016_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|431aa|up_6|NC_014833.1_239108_240401_-	cd14749, PBP2_XBP1_like, The periplasmic-binding component of ABC transport systems specific for xylo-oligosaccharides; possesses type 2 periplasmic binding fold	NA|180aa|up_5|NC_014833.1_241490_242030_+	TIGR02851, stage_V_sporulation_protein_T, stage V sporulation protein T	NA|224aa|up_4|NC_014833.1_242076_242748_-	pfam01980, UPF0066, Uncharacterized protein family UPF0066	NA|120aa|up_3|NC_014833.1_242823_243183_-	NA	NA|340aa|up_2|NC_014833.1_243307_244327_-	PRK08673, PRK08673, 3-deoxy-7-phosphoheptulonate synthase; Reviewed	NA|172aa|up_1|NC_014833.1_244675_245191_-	COG5529, COG5529, Pyocin large subunit [General function prediction only]	NA|286aa|up_0|NC_014833.1_245306_246164_-	pfam05110, AF-4, AF-4 proto-oncoprotein	NA|164aa|down_0|NC_014833.1_247103_247595_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|374aa|down_1|NC_014833.1_247699_248821_+	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase	NA|352aa|down_2|NC_014833.1_248867_249923_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|150aa|down_3|NC_014833.1_250483_250933_+	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18	NA|290aa|down_4|NC_014833.1_250989_251859_-	PRK12362, PRK12362, germination protease; Provisional	NA|84aa|down_5|NC_014833.1_252081_252333_+	pfam01649, Ribosomal_S20p, Ribosomal protein S20	NA|152aa|down_6|NC_014833.1_252555_253011_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|594aa|down_7|NC_014833.1_253007_254789_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|641aa|down_8|NC_014833.1_254789_256712_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|297aa|down_9|NC_014833.1_256867_257758_-	PRK01212, PRK01212, homoserine kinase; Provisional
GCF_000179635.2_ASM17963v2	NC_014833	Ruminococcus albus 7 = DSM 20455, complete sequence	3	535125-535256	3	CRISPRCasFinder	no		cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	Orphan	AAGTTCGGGTAGTATGTTTCTCGGTGCCCATTGTAAGCT	39	0	0	NA	NA	NA	1	1	Orphan	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cas14j	NA|107aa|up_7|NC_014833.1_524639_524960_+,NA|161aa|up_6|NC_014833.1_524964_525447_+,NA|288aa|up_3|NC_014833.1_527831_528695_+,NA	NA|199aa|up_9|NC_014833.1_522594_523191_+	cd06259, YdcF-like, YdcF-like	NA|441aa|up_8|NC_014833.1_523313_524636_+	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed	NA|107aa|up_7|NC_014833.1_524639_524960_+	NA	NA|161aa|up_6|NC_014833.1_524964_525447_+	NA	NA|247aa|up_5|NC_014833.1_525596_526337_+	cd02553, PseudoU_synth_RsuA, Pseudouridine synthase, Escherichia coli RsuA like	NA|381aa|up_4|NC_014833.1_526525_527668_+	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|288aa|up_3|NC_014833.1_527831_528695_+	NA	NA|327aa|up_2|NC_014833.1_531198_532179_+	cd07325, M48_Ste24p_like, M48 Ste24 endopeptidase-like, integral membrane metallopeptidase	NA|591aa|up_1|NC_014833.1_532175_533948_+	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins	NA|342aa|up_0|NC_014833.1_533998_535024_-	pfam02517, Abi, CAAX protease self-immunity	NA|720aa|down_0|NC_014833.1_537987_540147_-	cd06267, PBP1_LacI_sugar_binding-like, ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily	NA|344aa|down_1|NC_014833.1_540545_541577_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|688aa|down_2|NC_014833.1_544075_546139_+	cd06267, PBP1_LacI_sugar_binding-like, ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily	NA|1021aa|down_3|NC_014833.1_549572_552635_-	cd01821, Rhamnogalacturan_acetylesterase_like, Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases	NA|166aa|down_4|NC_014833.1_553036_553534_+	pfam02559, CarD_CdnL_TRCF, CarD-like/TRCF domain	NA|210aa|down_5|NC_014833.1_553762_554392_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|252aa|down_6|NC_014833.1_554406_555162_+	cd02233, cupin_HNL-like, Granulicella tundricola hydroxynitrile lyase (GtHNL) and related proteins, cupin domain	NA|159aa|down_7|NC_014833.1_555293_555770_-	pfam02388, FemAB, FemAB family	NA|193aa|down_8|NC_014833.1_556070_556649_+	pfam08769, Spo0A_C, Sporulation initiation factor Spo0A C terminal	NA|373aa|down_9|NC_014833.1_556884_558003_+	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated
GCF_000179635.2_ASM17963v2	NC_014833	Ruminococcus albus 7 = DSM 20455, complete sequence	4	813193-813294	4	CRISPRCasFinder	no		cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	Orphan	ATGTTGTTCTTTATTTGTTCTTTAT	25	0	0	NA	NA	NA	1	1	Orphan	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cas14j	NA|129aa|up_7|NC_014833.1_806231_806618_+,NA|205aa|up_3|NC_014833.1_809907_810522_+,NA|304aa|down_7|NC_014833.1_822891_823803_-,NA|94aa|down_8|NC_014833.1_823836_824118_-,NA|83aa|down_9|NC_014833.1_824180_824429_-	NA|544aa|up_9|NC_014833.1_804117_805749_+	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|140aa|up_8|NC_014833.1_805711_806131_+	COG3727, Vsr, DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]	NA|129aa|up_7|NC_014833.1_806231_806618_+	NA	NA|75aa|up_6|NC_014833.1_807176_807401_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|398aa|up_5|NC_014833.1_807911_809105_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|161aa|up_4|NC_014833.1_809200_809683_+	cd05937, FATP_chFAT1_like, Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi	NA|205aa|up_3|NC_014833.1_809907_810522_+	NA	NA|302aa|up_2|NC_014833.1_810511_811417_+	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|280aa|up_1|NC_014833.1_811631_812471_-	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|192aa|up_0|NC_014833.1_812472_813048_-	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin	NA|522aa|down_0|NC_014833.1_814000_815566_+	pfam13191, AAA_16, AAA ATPase domain	NA|192aa|down_1|NC_014833.1_816703_817279_+	COG1573, COG1573, Uracil-DNA glycosylase [DNA replication, recombination, and repair]	NA|273aa|down_2|NC_014833.1_817312_818131_+	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain	NA|55aa|down_3|NC_014833.1_818387_818552_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|161aa|down_4|NC_014833.1_819008_819491_+	cd00077, HDc, Metal dependent phosphohydrolases with conserved 'HD' motif	NA|439aa|down_5|NC_014833.1_819526_820843_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|361aa|down_6|NC_014833.1_821197_822280_+	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1)	NA|304aa|down_7|NC_014833.1_822891_823803_-	NA	NA|94aa|down_8|NC_014833.1_823836_824118_-	NA	NA|83aa|down_9|NC_014833.1_824180_824429_-	NA
GCF_000179635.2_ASM17963v2	NC_014833	Ruminococcus albus 7 = DSM 20455, complete sequence	5	1313206-1317474	5,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	Type I-C, Type I-U?,Type I-U	GTCTCTCCCCACACGGGGAGAGTGGATTGAAAT,GTCTCTCCCCACACGGGGAGAGTGGATTGAAAT,GTCTCTCCCCACACGGGGAGAGTGGATTGAAAT	33,33,33	0	0	NA	NA	NA:NA:NA	63,63,27	63	TypeI-C,TypeI-U?,TypeI-U	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cas14j	NA|132aa|up_9|NC_014833.1_1301446_1301842_+,NA|314aa|up_8|NC_014833.1_1301951_1302893_-,NA|240aa|up_7|NC_014833.1_1303617_1304337_-,NA|159aa|down_0|NC_014833.1_1317537_1318014_-,NA|315aa|down_5|NC_014833.1_1322089_1323034_-,NA|114aa|down_6|NC_014833.1_1323125_1323467_-,NA|521aa|down_7|NC_014833.1_1323580_1325143_-,NA|61aa|down_9|NC_014833.1_1328738_1328921_+	NA|132aa|up_9|NC_014833.1_1301446_1301842_+	NA	NA|314aa|up_8|NC_014833.1_1301951_1302893_-	NA	NA|240aa|up_7|NC_014833.1_1303617_1304337_-	NA	cas3|783aa|up_6|NC_014833.1_1305018_1307367_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|250aa|up_5|NC_014833.1_1307620_1308370_+	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|614aa|up_4|NC_014833.1_1308353_1310195_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|286aa|up_3|NC_014833.1_1310198_1311056_+	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas4|220aa|up_2|NC_014833.1_1311057_1311717_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas1|344aa|up_1|NC_014833.1_1311718_1312750_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NC_014833.1_1312754_1313045_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|159aa|down_0|NC_014833.1_1317537_1318014_-	NA	NA|504aa|down_1|NC_014833.1_1318065_1319577_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|119aa|down_2|NC_014833.1_1319669_1320026_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|106aa|down_3|NC_014833.1_1320019_1320337_-	TIGR04111, conserved_hypothetical_protein, phage-associated protein, BcepMu gp16 family	NA|288aa|down_4|NC_014833.1_1320589_1321453_-	pfam14433, SUKH-3, SUKH-3 immunity protein	NA|315aa|down_5|NC_014833.1_1322089_1323034_-	NA	NA|114aa|down_6|NC_014833.1_1323125_1323467_-	NA	NA|521aa|down_7|NC_014833.1_1323580_1325143_-	NA	NA|119aa|down_8|NC_014833.1_1326433_1326790_+	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|61aa|down_9|NC_014833.1_1328738_1328921_+	NA
GCF_000179635.2_ASM17963v2	NC_014833	Ruminococcus albus 7 = DSM 20455, complete sequence	6	1325369-1325938	2,6,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas5,cas8c,cas7,cas4,cas1,cas2	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	Type I-C, Type I-U?,Type I-U	ATTTCAATCCACTCTCCCCGTGTGGGGAGAGAC,ATTTCAATCCACTCTCCCCGTGTGGGGAGAGAC,ATTTCAATCCACTCTCCCCGTGTGGGGAGAGAC,ATTGGAATTTCAATCCACTCTCCCCGTGTGGGGAGAGACA	33,33,33,40	0	0	NA	NA	NA:NA:NA:NA	6,8,8,6	8	TypeI-C,TypeI-U?,TypeI-U	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cas14j	NA|159aa|up_7|NC_014833.1_1317537_1318014_-,NA|315aa|up_2|NC_014833.1_1322089_1323034_-,NA|114aa|up_1|NC_014833.1_1323125_1323467_-,NA|521aa|up_0|NC_014833.1_1323580_1325143_-,NA|61aa|down_1|NC_014833.1_1328738_1328921_+,NA|53aa|down_4|NC_014833.1_1333693_1333852_+,NA|377aa|down_6|NC_014833.1_1334582_1335713_+	cas1|344aa|up_9|NC_014833.1_1311718_1312750_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_8|NC_014833.1_1312754_1313045_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|159aa|up_7|NC_014833.1_1317537_1318014_-	NA	NA|504aa|up_6|NC_014833.1_1318065_1319577_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|119aa|up_5|NC_014833.1_1319669_1320026_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|106aa|up_4|NC_014833.1_1320019_1320337_-	TIGR04111, conserved_hypothetical_protein, phage-associated protein, BcepMu gp16 family	NA|288aa|up_3|NC_014833.1_1320589_1321453_-	pfam14433, SUKH-3, SUKH-3 immunity protein	NA|315aa|up_2|NC_014833.1_1322089_1323034_-	NA	NA|114aa|up_1|NC_014833.1_1323125_1323467_-	NA	NA|521aa|up_0|NC_014833.1_1323580_1325143_-	NA	NA|119aa|down_0|NC_014833.1_1326433_1326790_+	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|61aa|down_1|NC_014833.1_1328738_1328921_+	NA	NA|524aa|down_2|NC_014833.1_1329130_1330702_+	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase	NA|526aa|down_3|NC_014833.1_1331463_1333041_-	pfam14200, RicinB_lectin_2, Ricin-type beta-trefoil lectin domain-like	NA|53aa|down_4|NC_014833.1_1333693_1333852_+	NA	NA|240aa|down_5|NC_014833.1_1333861_1334581_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|377aa|down_6|NC_014833.1_1334582_1335713_+	NA	NA|1309aa|down_7|NC_014833.1_1336400_1340327_-	cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin	NA|594aa|down_8|NC_014833.1_1340701_1342483_+	pfam16116, DUF4832, Domain of unknown function (DUF4832)	NA|365aa|down_9|NC_014833.1_1342743_1343838_+	sd00036, LRR_3, leucine-rich repeats
GCF_000179635.2_ASM17963v2	NC_014833	Ruminococcus albus 7 = DSM 20455, complete sequence	7	2788118-2788250	7	CRISPRCasFinder	no		cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	Orphan	TATCAGCTTTAGAATTGCTCTCTGTTGTATTGTACGGCATTGTA	44	0	0	NA	NA	NA	1	1	Orphan	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cas14j	NA|125aa|up_3|NC_014833.1_2784815_2785190_-,NA|357aa|down_0|NC_014833.1_2788492_2789563_-,NA|142aa|down_2|NC_014833.1_2791154_2791580_-	NA|450aa|up_9|NC_014833.1_2776631_2777981_-	PRK09414, PRK09414, NADP-specific glutamate dehydrogenase	NA|568aa|up_8|NC_014833.1_2778675_2780379_+	pfam18475, PIN7, PIN domain	NA|615aa|up_7|NC_014833.1_2780430_2782275_+	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|137aa|up_6|NC_014833.1_2782279_2782690_+	PRK09218, PRK09218, peptide deformylase; Validated	NA|126aa|up_5|NC_014833.1_2782805_2783183_-	cd08352, VOC_Bs_YwkD_like, vicinal oxygen chelate (VOC) family protein  Bacillus subtilis YwkD and similar proteins	NA|293aa|up_4|NC_014833.1_2783912_2784791_-	pfam01430, HSP33, Hsp33 protein	NA|125aa|up_3|NC_014833.1_2784815_2785190_-	NA	NA|251aa|up_2|NC_014833.1_2785219_2785972_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|103aa|up_1|NC_014833.1_2785968_2786277_-	COG4496, COG4496, Uncharacterized protein conserved in bacteria [Function unknown]	NA|396aa|up_0|NC_014833.1_2786545_2787733_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|357aa|down_0|NC_014833.1_2788492_2789563_-	NA	NA|249aa|down_1|NC_014833.1_2790231_2790978_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|142aa|down_2|NC_014833.1_2791154_2791580_-	NA	NA|236aa|down_3|NC_014833.1_2791746_2792454_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|132aa|down_4|NC_014833.1_2792539_2792935_-	COG0295, Cdd, Cytidine deaminase [Nucleotide transport and metabolism]	NA|809aa|down_5|NC_014833.1_2793004_2795431_-	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|82aa|down_6|NC_014833.1_2795652_2795898_-	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|201aa|down_7|NC_014833.1_2795952_2796555_-	pfam00436, SSB, Single-strand binding protein family	NA|97aa|down_8|NC_014833.1_2796627_2796918_-	cd00473, bS6, Bacterial ribosomal protein S6	NA|322aa|down_9|NC_014833.1_2797046_2798012_-	pfam14446, Prok-RING_1, Prokaryotic RING finger family 1
GCF_000179635.2_ASM17963v2	NC_014833	Ruminococcus albus 7 = DSM 20455, complete sequence	8	3541542-3541678	8	CRISPRCasFinder	no		cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	Orphan	CCGCATTCGTCCGATACCGTGTCACTAAAGGAGCGCCCTTTGCT	44	0	0	NA	NA	NA	1	1	Orphan	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cas14j	NA|140aa|up_8|NC_014833.1_3532493_3532913_+,NA|80aa|up_1|NC_014833.1_3538865_3539105_-,NA|100aa|down_4|NC_014833.1_3548233_3548533_+	NA|157aa|up_9|NC_014833.1_3531568_3532039_+	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|140aa|up_8|NC_014833.1_3532493_3532913_+	NA	NA|144aa|up_7|NC_014833.1_3532945_3533377_+	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|457aa|up_6|NC_014833.1_3533396_3534767_+	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|298aa|up_5|NC_014833.1_3534766_3535660_+	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|291aa|up_4|NC_014833.1_3535652_3536525_+	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|78aa|up_3|NC_014833.1_3536543_3536777_+	PRK00982, acpP, acyl carrier protein; Provisional	NA|580aa|up_2|NC_014833.1_3537068_3538808_-	pfam02156, Glyco_hydro_26, Glycosyl hydrolase family 26	NA|80aa|up_1|NC_014833.1_3538865_3539105_-	NA	NA|767aa|up_0|NC_014833.1_3539126_3541427_-	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain	NA|986aa|down_0|NC_014833.1_3541832_3544790_-	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|356aa|down_1|NC_014833.1_3544810_3545878_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|415aa|down_2|NC_014833.1_3546184_3547429_-	PRK06349, PRK06349, homoserine dehydrogenase; Provisional	NA|149aa|down_3|NC_014833.1_3547482_3547929_-	PRK04435, PRK04435, ACT domain-containing protein	NA|100aa|down_4|NC_014833.1_3548233_3548533_+	NA	NA|345aa|down_5|NC_014833.1_3548563_3549598_+	pfam01992, vATP-synt_AC39, ATP synthase (C/AC39) subunit	NA|651aa|down_6|NC_014833.1_3549633_3551586_+	PRK05771, PRK05771, V-type ATP synthase subunit I; Validated	NA|149aa|down_7|NC_014833.1_3551610_3552057_+	cd18120, ATP-synt_Vo_Ao_c, Membrane-bound Vo/Ao complexes of V/A-type ATP synthases, subunit c	NA|103aa|down_8|NC_014833.1_3552061_3552370_+	pfam01990, ATP-synt_F, ATP synthase (F/14-kDa) subunit	NA|198aa|down_9|NC_014833.1_3552387_3552981_+	COG1390, NtpE, Archaeal/vacuolar-type H+-ATPase subunit E [Energy production and conversion]
GCF_000179635.2_ASM17963v2	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	1	93995-94579	1	CRISPRCasFinder	no	c2c10_CAS-V-U3,cas14j	DEDDh,c2c10_CAS-V-U3,cas14j,WYL	Unclear	ACACTTGATGTAAGCGGATTTGATACAAGCAAAGTAACCGATATG	45	0	0	NA	NA	NA	7	7	TypeV	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cas14j	NA|248aa|up_9|NC_014824.1_81932_82676_-,NA|148aa|up_7|NC_014824.1_84915_85359_-,NA|58aa|up_5|NC_014824.1_86296_86470_+,NA|144aa|up_4|NC_014824.1_88009_88441_+,NA|149aa|down_3|NC_014824.1_100647_101094_+,NA|126aa|down_6|NC_014824.1_104859_105237_-	NA|248aa|up_9|NC_014824.1_81932_82676_-	NA	c2c10_CAS-V-U3|442aa|up_8|NC_014824.1_82840_84166_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|148aa|up_7|NC_014824.1_84915_85359_-	NA	NA|61aa|up_6|NC_014824.1_85495_85678_-	pfam11515, Cul7, Mouse development and cellular proliferation protein Cullin-7	NA|58aa|up_5|NC_014824.1_86296_86470_+	NA	NA|144aa|up_4|NC_014824.1_88009_88441_+	NA	NA|373aa|up_3|NC_014824.1_88448_89567_+	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	NA|58aa|up_2|NC_014824.1_90646_90820_-	pfam04256, DUF434, Protein of unknown function (DUF434)	NA|509aa|up_1|NC_014824.1_91098_92625_-	sd00036, LRR_3, leucine-rich repeats	NA|60aa|up_0|NC_014824.1_92952_93132_-	pfam13817, DDE_Tnp_IS66_C, IS66 C-terminal element	NA|892aa|down_0|NC_014824.1_95183_97859_+	pfam14587, Glyco_hydr_30_2, O-Glycosyl hydrolase family 30	NA|390aa|down_1|NC_014824.1_98337_99507_+	pfam13635, DUF4143, Domain of unknown function (DUF4143)	NA|75aa|down_2|NC_014824.1_100181_100406_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|149aa|down_3|NC_014824.1_100647_101094_+	NA	NA|73aa|down_4|NC_014824.1_101440_101659_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	cas14j|373aa|down_5|NC_014824.1_103678_104797_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|126aa|down_6|NC_014824.1_104859_105237_-	NA	NA|106aa|down_7|NC_014824.1_105260_105578_-	COG4551, COG4551, Predicted protein tyrosine phosphatase [General function prediction only]	NA|40aa|down_8|NC_014824.1_105985_106105_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	c2c10_CAS-V-U3|442aa|down_9|NC_014824.1_106123_107449_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_000179635.2_ASM17963v2	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	2	304527-304824	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	c2c10_CAS-V-U3	DEDDh,c2c10_CAS-V-U3,cas14j,WYL	Type V-U3	GATGCAATCTGTACAGGCAGGTAAATTGCGAG,GATGCAATCTGTACAGGCAGGTAAATTGCGAG,GATGCAATCTGTACAGGCAGGTAAATTGCGAG	32,32,32	2	2	304559-304595|304693-304725	NC_014833.1_3219188-3219224|NC_014833.1_3632593-3632625	NA:NA:NA	3,4,4	4	TypeV-U3	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cas14j	NA|241aa|up_9|NC_014824.1_296505_297228_+,NA|263aa|up_8|NC_014824.1_297762_298551_+,NA|95aa|up_7|NC_014824.1_298937_299222_+,NA|237aa|up_5|NC_014824.1_300650_301361_+,NA|104aa|up_4|NC_014824.1_301374_301686_+,NA|113aa|up_3|NC_014824.1_301861_302200_+,NA|179aa|up_2|NC_014824.1_302359_302896_+,NA|155aa|up_1|NC_014824.1_303024_303489_+,NA|155aa|up_0|NC_014824.1_303510_303975_+,NA|196aa|down_2|NC_014824.1_307550_308138_+,NA|123aa|down_3|NC_014824.1_308140_308509_+,NA|91aa|down_4|NC_014824.1_308528_308801_+,NA|83aa|down_5|NC_014824.1_308793_309042_+,NA|77aa|down_6|NC_014824.1_309054_309285_+,NA|174aa|down_8|NC_014824.1_311828_312350_+,NA|164aa|down_9|NC_014824.1_312389_312881_+	NA|241aa|up_9|NC_014824.1_296505_297228_+	NA	NA|263aa|up_8|NC_014824.1_297762_298551_+	NA	NA|95aa|up_7|NC_014824.1_298937_299222_+	NA	NA|362aa|up_6|NC_014824.1_299431_300517_+	pfam01555, N6_N4_Mtase, DNA methylase	NA|237aa|up_5|NC_014824.1_300650_301361_+	NA	NA|104aa|up_4|NC_014824.1_301374_301686_+	NA	NA|113aa|up_3|NC_014824.1_301861_302200_+	NA	NA|179aa|up_2|NC_014824.1_302359_302896_+	NA	NA|155aa|up_1|NC_014824.1_303024_303489_+	NA	NA|155aa|up_0|NC_014824.1_303510_303975_+	NA	NA|371aa|down_0|NC_014824.1_305151_306264_+	cd14256, Dockerin_I, Type I dockerin repeat domain	NA|292aa|down_1|NC_014824.1_306553_307429_+	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain	NA|196aa|down_2|NC_014824.1_307550_308138_+	NA	NA|123aa|down_3|NC_014824.1_308140_308509_+	NA	NA|91aa|down_4|NC_014824.1_308528_308801_+	NA	NA|83aa|down_5|NC_014824.1_308793_309042_+	NA	NA|77aa|down_6|NC_014824.1_309054_309285_+	NA	NA|650aa|down_7|NC_014824.1_309602_311552_+	sd00036, LRR_3, leucine-rich repeats	NA|174aa|down_8|NC_014824.1_311828_312350_+	NA	NA|164aa|down_9|NC_014824.1_312389_312881_+	NA
GCF_000179635.2_ASM17963v2	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	3	313733-313900	2,3	PILER-CR,CRISPRCasFinder	no	c2c10_CAS-V-U3	DEDDh,c2c10_CAS-V-U3,cas14j,WYL	Type V-U3	TCGAACACTATGATGCAATCTGCACTACGCAAGTGAATTGCGAG,TGCAATCTGCACTACGCAAGTGAATTGCGAG	44,31	0	0	NA	NA	NA:NA	2,2	2	TypeV-U3	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cas14j	NA|196aa|up_8|NC_014824.1_307550_308138_+,NA|123aa|up_7|NC_014824.1_308140_308509_+,NA|91aa|up_6|NC_014824.1_308528_308801_+,NA|83aa|up_5|NC_014824.1_308793_309042_+,NA|77aa|up_4|NC_014824.1_309054_309285_+,NA|174aa|up_2|NC_014824.1_311828_312350_+,NA|164aa|up_1|NC_014824.1_312389_312881_+,NA|172aa|up_0|NC_014824.1_312900_313416_+,NA|48aa|down_1|NC_014824.1_314782_314926_+,NA|86aa|down_2|NC_014824.1_315156_315414_+,NA|43aa|down_6|NC_014824.1_319117_319246_+,NA|88aa|down_7|NC_014824.1_319700_319964_+,NA|107aa|down_8|NC_014824.1_320467_320788_+,NA|65aa|down_9|NC_014824.1_320801_320996_+	NA|292aa|up_9|NC_014824.1_306553_307429_+	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain	NA|196aa|up_8|NC_014824.1_307550_308138_+	NA	NA|123aa|up_7|NC_014824.1_308140_308509_+	NA	NA|91aa|up_6|NC_014824.1_308528_308801_+	NA	NA|83aa|up_5|NC_014824.1_308793_309042_+	NA	NA|77aa|up_4|NC_014824.1_309054_309285_+	NA	NA|650aa|up_3|NC_014824.1_309602_311552_+	sd00036, LRR_3, leucine-rich repeats	NA|174aa|up_2|NC_014824.1_311828_312350_+	NA	NA|164aa|up_1|NC_014824.1_312389_312881_+	NA	NA|172aa|up_0|NC_014824.1_312900_313416_+	NA	NA|207aa|down_0|NC_014824.1_314124_314745_+	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1)	NA|48aa|down_1|NC_014824.1_314782_314926_+	NA	NA|86aa|down_2|NC_014824.1_315156_315414_+	NA	c2c10_CAS-V-U3|456aa|down_3|NC_014824.1_316066_317434_+	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain	NA|267aa|down_4|NC_014824.1_317780_318581_+	pfam14025, DUF4241, Protein of unknown function (DUF4241)	NA|159aa|down_5|NC_014824.1_318577_319054_+	cd02901, Macro_Poa1p-like, macrodomain, Poa1p-like family	NA|43aa|down_6|NC_014824.1_319117_319246_+	NA	NA|88aa|down_7|NC_014824.1_319700_319964_+	NA	NA|107aa|down_8|NC_014824.1_320467_320788_+	NA	NA|65aa|down_9|NC_014824.1_320801_320996_+	NA
GCF_000179635.2_ASM17963v2	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	4	390959-391072	4	CRISPRCasFinder	no	cas14j,WYL	DEDDh,c2c10_CAS-V-U3,cas14j,WYL	Unclear	GCCTGTTGCAGTGATCGTACCGCCGTT	27	0	0	NA	NA	NA	1	1	TypeV	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cas14j	NA|80aa|up_7|NC_014824.1_385757_385997_+,NA|189aa|up_5|NC_014824.1_386661_387228_-,NA|169aa|up_4|NC_014824.1_387240_387747_-,NA|184aa|up_2|NC_014824.1_388499_389051_-,NA|61aa|up_1|NC_014824.1_389079_389262_-,NA|166aa|down_0|NC_014824.1_391972_392470_-,NA|184aa|down_1|NC_014824.1_392488_393040_-,NA|122aa|down_2|NC_014824.1_393533_393899_+,NA|101aa|down_3|NC_014824.1_393917_394220_+,NA|173aa|down_5|NC_014824.1_394596_395115_+,NA|89aa|down_9|NC_014824.1_398654_398921_+	NA|445aa|up_9|NC_014824.1_383618_384953_+	pfam00665, rve, Integrase core domain	NA|272aa|up_8|NC_014824.1_384945_385761_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|80aa|up_7|NC_014824.1_385757_385997_+	NA	NA|140aa|up_6|NC_014824.1_386149_386569_-	cd14256, Dockerin_I, Type I dockerin repeat domain	NA|189aa|up_5|NC_014824.1_386661_387228_-	NA	NA|169aa|up_4|NC_014824.1_387240_387747_-	NA	NA|247aa|up_3|NC_014824.1_387759_388500_-	cd01803, Ubl_ubiquitin, ubiquitin-like (Ubl) domain found in ubiquitin	NA|184aa|up_2|NC_014824.1_388499_389051_-	NA	NA|61aa|up_1|NC_014824.1_389079_389262_-	NA	NA|403aa|up_0|NC_014824.1_389361_390570_-	cd08586, PI-PLCc_BcPLC_like, Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins	NA|166aa|down_0|NC_014824.1_391972_392470_-	NA	NA|184aa|down_1|NC_014824.1_392488_393040_-	NA	NA|122aa|down_2|NC_014824.1_393533_393899_+	NA	NA|101aa|down_3|NC_014824.1_393917_394220_+	NA	NA|110aa|down_4|NC_014824.1_394263_394593_+	pfam14191, YodL, YodL-like	NA|173aa|down_5|NC_014824.1_394596_395115_+	NA	NA|175aa|down_6|NC_014824.1_395342_395867_+	pfam04275, P-mevalo_kinase, Phosphomevalonate kinase	NA|318aa|down_7|NC_014824.1_395992_396946_+	pfam01555, N6_N4_Mtase, DNA methylase	NA|390aa|down_8|NC_014824.1_396990_398160_-	PRK05667, dnaG, DNA primase; Validated	NA|89aa|down_9|NC_014824.1_398654_398921_+	NA
GCF_000179635.2_ASM17963v2	NC_014825	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL02, complete sequence	1	312878-313019	1	CRISPRCasFinder	no		csa3,DEDDh	Orphan	TGTTTCTCGGTGCCCTTTGAAGCTTGCAAACAAACACAGCTGCCCTAGCC	50	0	0	NA	NA	NA	1	1	Orphan	cas3HD,c2c10_CAS-V-U3,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,cas14j	NA|283aa|up_8|NC_014825.1_300210_301059_+,NA|158aa|up_1|NC_014825.1_310625_311099_-,NA|57aa|down_2|NC_014825.1_315524_315695_+,NA|57aa|down_4|NC_014825.1_317334_317505_+	NA|463aa|up_9|NC_014825.1_298473_299862_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|283aa|up_8|NC_014825.1_300210_301059_+	NA	NA|602aa|up_7|NC_014825.1_301521_303327_-	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism]	NA|481aa|up_6|NC_014825.1_303735_305178_+	COG0034, PurF, Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]	NA|384aa|up_5|NC_014825.1_305440_306592_-	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ	NA|622aa|up_4|NC_014825.1_306662_308528_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|189aa|up_3|NC_014825.1_308599_309166_-	cd00446, GrpE, nucleotide exchange factor GrpE	NA|338aa|up_2|NC_014825.1_309178_310192_-	PRK00082, hrcA, heat-inducible transcription repressor; Provisional	NA|158aa|up_1|NC_014825.1_310625_311099_-	NA	NA|473aa|up_0|NC_014825.1_311408_312827_+	COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism]	NA|449aa|down_0|NC_014825.1_313424_314771_+	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|247aa|down_1|NC_014825.1_314770_315511_+	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|57aa|down_2|NC_014825.1_315524_315695_+	NA	NA|468aa|down_3|NC_014825.1_315713_317117_-	pfam13586, DDE_Tnp_1_2, Transposase DDE domain	NA|57aa|down_4|NC_014825.1_317334_317505_+	NA	NA|233aa|down_5|NC_014825.1_317549_318248_+	pfam04493, Endonuclease_5, Endonuclease V	NA|332aa|down_6|NC_014825.1_318328_319324_-	cd06284, PBP1_LacI-like, ligand-binding domain of an uncharacterized transcription regulator from Actinobacillus succinogenes and its close homologs from other bacteria	NA|229aa|down_7|NC_014825.1_319407_320094_-	pfam02586, SRAP, SOS response associated peptidase (SRAP)	NA|1208aa|down_8|NC_014825.1_320554_324178_+	pfam03415, Peptidase_C11, Clostripain family	NA|456aa|down_9|NC_014825.1_324318_325686_+	PRK12391, PRK12391, TrpB-like pyridoxal phosphate-dependent enzyme
