assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000184345.1_ASM18434v2	NC_017583	Spirochaeta thermophila DSM 6578, complete sequence	1	706868-707012	1	PILER-CR	no		WYL,cas3HD,cas1,cas2,DinG,cas3,cas10d,cas11d,csc2gr7,cas4,cas6,csa3,DEDDh	Orphan	GGTGGAGGCGGGGGTGGAG	19	0	0	NA	NA	NA	2	2	Orphan	WYL,cas3HD,cas1,cas2,DinG,cas3,cas10d,cas11d,csc2gr7,cas4,cas6,csa3,DEDDh	NA|133aa|up_9|NC_017583.1_691941_692340_-,NA|217aa|up_2|NC_017583.1_701800_702451_+,NA|295aa|down_9|NC_017583.1_718894_719779_-	NA|133aa|up_9|NC_017583.1_691941_692340_-	NA	NA|230aa|up_8|NC_017583.1_692506_693196_+	cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs	NA|794aa|up_7|NC_017583.1_693196_695578_-	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|413aa|up_6|NC_017583.1_695574_696813_-	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|207aa|up_5|NC_017583.1_696790_697411_-	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|451aa|up_4|NC_017583.1_697445_698798_-	PRK01490, tig, trigger factor; Provisional	NA|742aa|up_3|NC_017583.1_699485_701711_-	PRK13341, PRK13341, AAA family ATPase	NA|217aa|up_2|NC_017583.1_701800_702451_+	NA	NA|553aa|up_1|NC_017583.1_702463_704122_+	COG1283, NptA, Na+/phosphate symporter [Inorganic ion transport and metabolism]	NA|331aa|up_0|NC_017583.1_705716_706709_+	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated	NA|226aa|down_0|NC_017583.1_707833_708511_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|352aa|down_1|NC_017583.1_708555_709611_-	pfam01264, Chorismate_synt, Chorismate synthase	NA|184aa|down_2|NC_017583.1_709597_710149_-	COG0703, AroK, Shikimate kinase [Amino acid transport and metabolism]	NA|970aa|down_3|NC_017583.1_710329_713239_+	pfam03415, Peptidase_C11, Clostripain family	NA|630aa|down_4|NC_017583.1_713441_715331_+	COG1181, DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane]	NA|410aa|down_5|NC_017583.1_715340_716570_+	cd01117, YbiR_permease, Putative anion permease YbiR	NA|196aa|down_6|NC_017583.1_716601_717189_+	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|346aa|down_7|NC_017583.1_717203_718241_-	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family	NA|172aa|down_8|NC_017583.1_718298_718814_-	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|295aa|down_9|NC_017583.1_718894_719779_-	NA
GCF_000184345.1_ASM18434v2	NC_017583	Spirochaeta thermophila DSM 6578, complete sequence	2	795764-797434	2,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas3HD,cas10d,cas11d,csc2gr7,cas4,cas2,cas1,cas6	WYL,cas3HD,cas1,cas2,DinG,cas3,cas10d,cas11d,csc2gr7,cas4,cas6,csa3,DEDDh	Type I-D	CTTTCAGTATCCTCTAGCGGATCGTGGGGACTGCAAC,CTTTCAGTATCCTCTAGCGGATCGTGGGGACTGCAAC,CTTTCAGTATCCTCTAGCGGATCGTGGGGACTGCAAC	37,37,37	0	0	NA	NA	NA:NA:NA	22,22,22	22	TypeI-D	WYL,cas3HD,cas1,cas2,DinG,cas3,cas10d,cas11d,csc2gr7,cas4,cas6,csa3,DEDDh	NA|448aa|up_7|NC_017583.1_783763_785107_-,NA|1568aa|up_6|NC_017583.1_785242_789946_-,NA|339aa|up_5|NC_017583.1_789920_790937_+,NA|82aa|up_0|NC_017583.1_795514_795760_+,cas10d|787aa|down_3|NC_017583.1_802331_804692_+,cas11d|236aa|down_4|NC_017583.1_804704_805412_+	NA|574aa|up_9|NC_017583.1_779825_781547_-	PRK00095, mutL, DNA mismatch repair endonuclease MutL	NA|731aa|up_8|NC_017583.1_781560_783753_-	pfam04773, FecR, FecR protein	NA|448aa|up_7|NC_017583.1_783763_785107_-	NA	NA|1568aa|up_6|NC_017583.1_785242_789946_-	NA	NA|339aa|up_5|NC_017583.1_789920_790937_+	NA	NA|369aa|up_4|NC_017583.1_790940_792047_+	pfam00520, Ion_trans, Ion transport protein	NA|96aa|up_3|NC_017583.1_792052_792340_+	pfam04456, DUF503, Protein of unknown function (DUF503)	NA|237aa|up_2|NC_017583.1_792336_793047_-	pfam10719, ComFB, Late competence development protein ComFB	NA|277aa|up_1|NC_017583.1_793033_793864_-	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|82aa|up_0|NC_017583.1_795514_795760_+	NA	NA|314aa|down_0|NC_017583.1_797677_798619_+	cd00530, PTE, Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon	cas3|920aa|down_1|NC_017583.1_798827_801587_+	pfam00270, DEAD, DEAD/DEAH box helicase	cas3HD|257aa|down_2|NC_017583.1_801561_802332_+	cd09641, Cas3''_I, CRISPR/Cas system-associated protein Cas3''	cas10d|787aa|down_3|NC_017583.1_802331_804692_+	NA	cas11d|236aa|down_4|NC_017583.1_804704_805412_+	NA	csc2gr7|325aa|down_5|NC_017583.1_805404_806379_+	cd09709, Csc2_I-D, CRISPR/Cas system-associated protein Csc2	cas4|197aa|down_6|NC_017583.1_809794_810385_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas2|91aa|down_7|NC_017583.1_810402_810675_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|348aa|down_8|NC_017583.1_810677_811721_-	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	NA|163aa|down_9|NC_017583.1_812031_812520_+	COG0716, FldA, Flavodoxins [Energy production and conversion]
GCF_000184345.1_ASM18434v2	NC_017583	Spirochaeta thermophila DSM 6578, complete sequence	3	807201-809617	2,3,2	CRT,PILER-CR,CRISPRCasFinder	no	cas3,cas3HD,cas10d,cas11d,csc2gr7,cas4,cas2,cas1,cas6	WYL,cas3HD,cas1,cas2,DinG,cas3,cas10d,cas11d,csc2gr7,cas4,cas6,csa3,DEDDh	Type I-D	CTTTCAGTATCCTCTAGCGGATCGTGGGGGCTGCAAC,CTTTCAGTATCCTCTAGCGGATCGTGGGGGCTGCAAC,CTTTCAGTATCCTCTAGCGGATCGTGGGGGCTGCAAC	37,37,37	0	0	NA	NA	NA:NA:NA	32,31,31	32	TypeI-D	WYL,cas3HD,cas1,cas2,DinG,cas3,cas10d,cas11d,csc2gr7,cas4,cas6,csa3,DEDDh	NA|82aa|up_6|NC_017583.1_795514_795760_+,cas10d|787aa|up_2|NC_017583.1_802331_804692_+,cas11d|236aa|up_1|NC_017583.1_804704_805412_+,NA|76aa|down_4|NC_017583.1_812653_812881_+	NA|96aa|up_9|NC_017583.1_792052_792340_+	pfam04456, DUF503, Protein of unknown function (DUF503)	NA|237aa|up_8|NC_017583.1_792336_793047_-	pfam10719, ComFB, Late competence development protein ComFB	NA|277aa|up_7|NC_017583.1_793033_793864_-	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|82aa|up_6|NC_017583.1_795514_795760_+	NA	NA|314aa|up_5|NC_017583.1_797677_798619_+	cd00530, PTE, Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon	cas3|920aa|up_4|NC_017583.1_798827_801587_+	pfam00270, DEAD, DEAD/DEAH box helicase	cas3HD|257aa|up_3|NC_017583.1_801561_802332_+	cd09641, Cas3''_I, CRISPR/Cas system-associated protein Cas3''	cas10d|787aa|up_2|NC_017583.1_802331_804692_+	NA	cas11d|236aa|up_1|NC_017583.1_804704_805412_+	NA	csc2gr7|325aa|up_0|NC_017583.1_805404_806379_+	cd09709, Csc2_I-D, CRISPR/Cas system-associated protein Csc2	cas4|197aa|down_0|NC_017583.1_809794_810385_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas2|91aa|down_1|NC_017583.1_810402_810675_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|348aa|down_2|NC_017583.1_810677_811721_-	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	NA|163aa|down_3|NC_017583.1_812031_812520_+	COG0716, FldA, Flavodoxins [Energy production and conversion]	NA|76aa|down_4|NC_017583.1_812653_812881_+	NA	NA|167aa|down_5|NC_017583.1_812831_813332_+	pfam02517, Abi, CAAX protease self-immunity	cas6|348aa|down_6|NC_017583.1_813422_814466_-	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6	NA|215aa|down_7|NC_017583.1_814532_815177_-	smart00382, AAA, ATPases associated with a variety of cellular activities	NA|137aa|down_8|NC_017583.1_815344_815755_+	COG1342, COG1342, Predicted DNA-binding proteins [General function prediction only]	NA|458aa|down_9|NC_017583.1_815795_817169_+	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
