assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000184435.1_ASM18443v1	NC_014814	Mycolicibacterium gilvum Spyr1, complete sequence	1	440135-440241	1	CRISPRCasFinder	no		csa3,cas3,DinG,DEDDh,cas4,casR,WYL	Orphan	CCCTCGGGGTTGCTGCCGCCGTCAGCGGTGCCTTCGCC	38	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DinG,DEDDh,cas4,casR,WYL	NA|87aa|up_9|NC_014814.1_429961_430222_-,NA|107aa|up_3|NC_014814.1_436368_436689_-,NA	NA|87aa|up_9|NC_014814.1_429961_430222_-	NA	NA|390aa|up_8|NC_014814.1_430232_431402_-	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|395aa|up_7|NC_014814.1_431394_432579_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|136aa|up_6|NC_014814.1_432720_433128_-	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|413aa|up_5|NC_014814.1_433285_434524_-	cd04865, LigD_Pol_like_2, LigD_Pol_like_2: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 2	NA|570aa|up_4|NC_014814.1_434580_436290_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|107aa|up_3|NC_014814.1_436368_436689_-	NA	NA|424aa|up_2|NC_014814.1_436717_437989_-	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase	NA|301aa|up_1|NC_014814.1_437985_438888_-	COG4759, COG4759, Uncharacterized protein conserved in bacteria containing thioredoxin-like domain [Posttranslational modification, protein turnover, chaperones]	NA|403aa|up_0|NC_014814.1_438884_440093_-	pfam08007, Cupin_4, Cupin superfamily protein	NA|729aa|down_0|NC_014814.1_440395_442582_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|316aa|down_1|NC_014814.1_442642_443590_-	cd12175, 2-Hacid_dh_11, Putative D-isomer specific 2-hydroxyacid dehydrogenases, NAD-binding and catalytic domains	NA|379aa|down_2|NC_014814.1_443586_444723_-	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|192aa|down_3|NC_014814.1_444831_445407_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|210aa|down_4|NC_014814.1_445413_446043_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|302aa|down_5|NC_014814.1_446142_447048_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|597aa|down_6|NC_014814.1_447275_449066_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|513aa|down_7|NC_014814.1_449062_450601_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1329aa|down_8|NC_014814.1_450597_454584_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_9|NC_014814.1_454583_454892_+	pfam00934, PE, PE family
GCF_000184435.1_ASM18443v1	NC_014814	Mycolicibacterium gilvum Spyr1, complete sequence	2	1229748-1229832	2	CRISPRCasFinder	no		csa3,cas3,DinG,DEDDh,cas4,casR,WYL	Orphan	TAGGGGTGTCATTTGCCACCCCT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DinG,DEDDh,cas4,casR,WYL	NA|76aa|up_8|NC_014814.1_1224646_1224874_-,NA|241aa|up_7|NC_014814.1_1225382_1226105_-,NA|135aa|up_6|NC_014814.1_1226252_1226657_-,NA|251aa|up_3|NC_014814.1_1227696_1228449_-,NA|76aa|up_2|NC_014814.1_1228467_1228695_-,NA|97aa|up_1|NC_014814.1_1229088_1229379_-,NA|68aa|up_0|NC_014814.1_1229375_1229579_-,NA|181aa|down_2|NC_014814.1_1232617_1233160_+,NA|252aa|down_4|NC_014814.1_1234533_1235289_+	NA|118aa|up_9|NC_014814.1_1224258_1224612_-	pfam16525, MHB, Haemophore, haem-binding	NA|76aa|up_8|NC_014814.1_1224646_1224874_-	NA	NA|241aa|up_7|NC_014814.1_1225382_1226105_-	NA	NA|135aa|up_6|NC_014814.1_1226252_1226657_-	NA	NA|121aa|up_5|NC_014814.1_1226653_1227016_-	pfam05119, Terminase_4, Phage terminase, small subunit	NA|198aa|up_4|NC_014814.1_1227140_1227734_-	pfam01844, HNH, HNH endonuclease	NA|251aa|up_3|NC_014814.1_1227696_1228449_-	NA	NA|76aa|up_2|NC_014814.1_1228467_1228695_-	NA	NA|97aa|up_1|NC_014814.1_1229088_1229379_-	NA	NA|68aa|up_0|NC_014814.1_1229375_1229579_-	NA	NA|328aa|down_0|NC_014814.1_1231133_1232117_-	pfam09250, Prim-Pol, Bifunctional DNA primase/polymerase, N-terminal	NA|64aa|down_1|NC_014814.1_1232283_1232475_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|181aa|down_2|NC_014814.1_1232617_1233160_+	NA	NA|390aa|down_3|NC_014814.1_1233149_1234319_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|252aa|down_4|NC_014814.1_1234533_1235289_+	NA	NA|195aa|down_5|NC_014814.1_1235285_1235870_+	cd02862, NorE_like, NorE_like subfamily of heme-copper oxidase subunit III	NA|90aa|down_6|NC_014814.1_1235869_1236139_+	pfam03626, COX4_pro, Prokaryotic Cytochrome C oxidase subunit IV	NA|275aa|down_7|NC_014814.1_1236135_1236960_-	TIGR03621, F420_MSMEG_2516, probable F420-dependent oxidoreductase, MSMEG_2516 family	NA|366aa|down_8|NC_014814.1_1237084_1238182_+	PRK13517, PRK13517, glutamate--cysteine ligase	NA|402aa|down_9|NC_014814.1_1238243_1239449_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
GCF_000184435.1_ASM18443v1	NC_014814	Mycolicibacterium gilvum Spyr1, complete sequence	3	3319307-3319395	3	CRISPRCasFinder	no		csa3,cas3,DinG,DEDDh,cas4,casR,WYL	Orphan	GGCGGTGCGGGCGGCGAGAACGTCTCGACCGA	32	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DinG,DEDDh,cas4,casR,WYL	NA,NA	NA|348aa|up_9|NC_014814.1_3308109_3309153_-	cd04685, Nudix_Hydrolase_26, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|377aa|up_8|NC_014814.1_3309149_3310280_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|318aa|up_7|NC_014814.1_3310311_3311265_-	PRK07920, PRK07920, lipid A biosynthesis lauroyl acyltransferase; Provisional	NA|215aa|up_6|NC_014814.1_3311261_3311906_-	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|183aa|up_5|NC_014814.1_3311920_3312469_-	cd01275, FHIT, FHIT (fragile histidine family): FHIT proteins, related to the HIT family carry a motif HxHxH/Qxx (x, is a hydrophobic amino acid), On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified into three  branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases	NA|696aa|up_4|NC_014814.1_3312470_3314558_-	PRK12305, thrS, threonyl-tRNA synthetase; Reviewed	NA|143aa|up_3|NC_014814.1_3314644_3315073_-	TIGR02611, Putative_membrane_protein, TIGR02611 family protein	NA|225aa|up_2|NC_014814.1_3315069_3315744_-	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|166aa|up_1|NC_014814.1_3315801_3316299_+	pfam09348, DUF1990, Domain of unknown function (DUF1990)	NA|239aa|up_0|NC_014814.1_3316496_3317213_+	pfam03861, ANTAR, ANTAR domain	NA|571aa|down_0|NC_014814.1_3321074_3322787_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|333aa|down_1|NC_014814.1_3322900_3323899_+	PRK07877, PRK07877, Rv1355c family protein	NA|275aa|down_2|NC_014814.1_3323892_3324717_+	pfam00582, Usp, Universal stress protein family	NA|217aa|down_3|NC_014814.1_3324748_3325399_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|330aa|down_4|NC_014814.1_3325416_3326406_-	PRK07877, PRK07877, Rv1355c family protein	NA|548aa|down_5|NC_014814.1_3326489_3328133_-	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins	NA|437aa|down_6|NC_014814.1_3328564_3329875_+	cd14750, PBP2_TMBP, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose; possesses type 2 periplasmic binding fold	NA|311aa|down_7|NC_014814.1_3329871_3330804_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|276aa|down_8|NC_014814.1_3330800_3331628_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|410aa|down_9|NC_014814.1_3331632_3332862_+	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
