assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000185805.1_ASM18580v1	NC_014926	Thermovibrio ammonificans HB-1, complete genome	1	301011-301108	1	CRISPRCasFinder	no	cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7	csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	Type III-C,Type III-A, Type III-B?,Type III-B,Type III-D	AGGTTTGTTGCTTCATGTGTGTAAGAAAA	29	0	0	NA	NA	NA	1	1	TypeIII-C,TypeIII-A,TypeIII-B?,TypeIII-B,TypeIII-D	csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	NA|195aa|up_7|NC_014926.1_289300_289885_+,NA|84aa|down_0|NC_014926.1_302421_302673_+,cmr3gr5|287aa|down_4|NC_014926.1_305684_306545_-,cmr5gr11|119aa|down_5|NC_014926.1_306547_306904_-	NA|125aa|up_9|NC_014926.1_287733_288108_+	COG0295, Cdd, Cytidine deaminase [Nucleotide transport and metabolism]	NA|224aa|up_8|NC_014926.1_288118_288790_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|195aa|up_7|NC_014926.1_289300_289885_+	NA	NA|1447aa|up_6|NC_014926.1_289932_294273_+	PRK11750, gltB, glutamate synthase subunit alpha; Provisional	NA|532aa|up_5|NC_014926.1_294303_295899_-	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|287aa|up_4|NC_014926.1_295987_296848_+	cd08829, SPFH_paraslipin, Paraslipin or slipin-2 (SLP-2, a subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|148aa|up_3|NC_014926.1_296834_297278_+	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|358aa|up_2|NC_014926.1_297270_298344_+	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase	NA|267aa|up_1|NC_014926.1_298318_299119_+	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase	NA|283aa|up_0|NC_014926.1_299091_299940_+	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only]	NA|84aa|down_0|NC_014926.1_302421_302673_+	NA	NA|177aa|down_1|NC_014926.1_302672_303203_+	PRK05456, PRK05456, ATP-dependent protease subunit HslV	NA|481aa|down_2|NC_014926.1_303212_304655_+	PRK05201, hslU, ATP-dependent protease ATPase subunit HslU	NA|344aa|down_3|NC_014926.1_304663_305695_+	cd01092, APP-like, Similar to Prolidase and Aminopeptidase P	cmr3gr5|287aa|down_4|NC_014926.1_305684_306545_-	NA	cmr5gr11|119aa|down_5|NC_014926.1_306547_306904_-	NA	cmr4gr7|396aa|down_6|NC_014926.1_306896_308084_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cas10|1032aa|down_7|NC_014926.1_308085_311181_-	cd09701, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr6gr7|388aa|down_8|NC_014926.1_311168_312332_-	pfam03787, RAMPs, RAMP superfamily	cmr1gr7|421aa|down_9|NC_014926.1_312324_313587_-	pfam03787, RAMPs, RAMP superfamily
GCF_000185805.1_ASM18580v1	NC_014926	Thermovibrio ammonificans HB-1, complete genome	2	321209-321633	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7	csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	Type III-C,Type III-A, Type III-B?,Type III-B,Type III-D	GTTTGAAATGCCCTATAA-------GGGATTGTGAC,GTTTGAAATGCCCTATAAGGGATTGTGAC,GTTTGAAATGCCCTATAAGGGATTGTGAC	36,29,29	1	1	321369-321404	NC_014917.1_5076-5111	NA:NA:NA	6,6,6	6	TypeIII-C,TypeIII-A,TypeIII-B?,TypeIII-B,TypeIII-D	csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	NA|97aa|up_8|NC_014926.1_314777_315068_-,NA|120aa|up_4|NC_014926.1_317790_318150_+,NA	NA|367aa|up_9|NC_014926.1_313675_314776_+	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional	NA|97aa|up_8|NC_014926.1_314777_315068_-	NA	NA|168aa|up_7|NC_014926.1_315155_315659_+	PRK00439, leuD, 3-isopropylmalate dehydratase small subunit; Reviewed	NA|360aa|up_6|NC_014926.1_315670_316750_+	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional	NA|339aa|up_5|NC_014926.1_316761_317778_+	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|120aa|up_4|NC_014926.1_317790_318150_+	NA	NA|231aa|up_3|NC_014926.1_318163_318856_+	PRK00685, PRK00685, metal-dependent hydrolase; Provisional	NA|250aa|up_2|NC_014926.1_318855_319605_+	cd07205, Pat_PNPLA6_PNPLA7_NTE1_like, Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1	NA|93aa|up_1|NC_014926.1_319595_319874_+	COG1254, AcyP, Acylphosphatases [Energy production and conversion]	NA|351aa|up_0|NC_014926.1_319848_320901_+	PRK06347, PRK06347, 1,4-beta-N-acetylmuramoylhydrolase	NA|481aa|down_0|NC_014926.1_321812_323255_-	COG0168, TrkG, Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|432aa|down_1|NC_014926.1_323258_324554_-	PRK09496, trkA, Trk system potassium transporter TrkA	NA|337aa|down_2|NC_014926.1_324610_325621_-	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|444aa|down_3|NC_014926.1_325617_326949_-	pfam05140, ResB, ResB-like family	NA|375aa|down_4|NC_014926.1_326995_328120_-	cd01312, Met_dep_hydrolase_D, Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	NA|481aa|down_5|NC_014926.1_328103_329546_-	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase	NA|224aa|down_6|NC_014926.1_329566_330238_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|825aa|down_7|NC_014926.1_330265_332740_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|240aa|down_8|NC_014926.1_332736_333456_+	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional	NA|184aa|down_9|NC_014926.1_333605_334157_+	PRK00431, PRK00431, ADP-ribose-binding protein
GCF_000185805.1_ASM18580v1	NC_014926	Thermovibrio ammonificans HB-1, complete genome	3	571094-571898	3,2,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no		csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	Orphan	GTTGAAATGCCCGAAAAAATCGGCGGGATTGCGAC,GTTGAAATGCCCGAAAAAATCGGCGGGATTGCGAC,GTTGAAATGCCCGAAAAAATCGGCGGGATTGCGAC,GTTGAAATGCCCGAAAAAATCGGCGGGATTGCGAC	35,35,35,35	0	0	NA	NA	NA:NA:NA:NA	10,10,7,7	10	Orphan	csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	NA,NA|274aa|down_0|NC_014926.1_571984_572806_+	NA|189aa|up_9|NC_014926.1_564037_564604_+	pfam02545, Maf, Maf-like protein	NA|241aa|up_8|NC_014926.1_564623_565346_+	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type	NA|239aa|up_7|NC_014926.1_565342_566059_+	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs)	NA|165aa|up_6|NC_014926.1_566062_566557_+	pfam02542, YgbB, YgbB family	NA|144aa|up_5|NC_014926.1_566556_566988_+	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|259aa|up_4|NC_014926.1_566987_567764_+	PRK05289, PRK05289, acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA|274aa|up_3|NC_014926.1_567751_568573_+	cd07741, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|181aa|up_2|NC_014926.1_568572_569115_+	PRK13695, PRK13695, NTPase	NA|335aa|up_1|NC_014926.1_569086_570091_+	pfam01430, HSP33, Hsp33 protein	NA|174aa|up_0|NC_014926.1_570090_570612_+	cd11375, Peptidase_M54, Peptidase family M54, also called archaemetzincins or archaelysins	NA|274aa|down_0|NC_014926.1_571984_572806_+	NA	NA|262aa|down_1|NC_014926.1_572792_573578_-	cd09009, PNP-EcPNPII_like, purine nucleoside phosphorylases similar to human PNP and Escherichia coli PNP-II (XapA)	NA|560aa|down_2|NC_014926.1_573580_575260_-	COG1792, MreC, Cell shape-determining protein [Cell envelope biogenesis, outer membrane]	NA|408aa|down_3|NC_014926.1_575359_576583_+	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism]	NA|137aa|down_4|NC_014926.1_576710_577121_+	cd07153, Fur_like, Ferric uptake regulator(Fur) and related metalloregulatory proteins; typically iron-dependent, DNA-binding repressors and activators	NA|113aa|down_5|NC_014926.1_577248_577587_+	pfam00543, P-II, Nitrogen regulatory protein P-II	NA|473aa|down_6|NC_014926.1_577602_579021_+	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I	NA|161aa|down_7|NC_014926.1_579238_579721_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|420aa|down_8|NC_014926.1_579717_580977_-	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase	NA|824aa|down_9|NC_014926.1_580976_583448_-	pfam12705, PDDEXK_1, PD-(D/E)XK nuclease superfamily
GCF_000185805.1_ASM18580v1	NC_014926	Thermovibrio ammonificans HB-1, complete genome	4	1049961-1050183	4,4,3	PILER-CR,CRISPRCasFinder,CRT	no		csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	Orphan	GTTTTATCTGAACAAGTGGGATTTAAACCT,GTTTTATCTGAACAAGTGGGATTTAAAC,GTTTTATCTGAACAAGTGGGATTTAAAC	30,28,28	0	0	NA	NA	NA:NA:NA	2,3,3	3	Orphan	csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	NA|360aa|up_6|NC_014926.1_1042640_1043720_+,NA|94aa|up_3|NC_014926.1_1045454_1045736_+,NA|113aa|down_0|NC_014926.1_1050554_1050893_-,NA|92aa|down_8|NC_014926.1_1059187_1059463_+	NA|169aa|up_9|NC_014926.1_1039879_1040386_-	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|576aa|up_8|NC_014926.1_1040462_1042190_-	PRK08609, PRK08609, DNA polymerase/3'-5' exonuclease PolX	NA|136aa|up_7|NC_014926.1_1042236_1042644_+	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|360aa|up_6|NC_014926.1_1042640_1043720_+	NA	NA|229aa|up_5|NC_014926.1_1043709_1044396_+	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins	NA|336aa|up_4|NC_014926.1_1044407_1045415_+	PRK02290, PRK02290, 3-dehydroquinate synthase II family protein	NA|94aa|up_3|NC_014926.1_1045454_1045736_+	NA	NA|315aa|up_2|NC_014926.1_1045735_1046680_+	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase	NA|123aa|up_1|NC_014926.1_1046780_1047149_+	cd04766, HTH_HspR, Helix-Turn-Helix DNA binding domain of the HspR transcription regulator	NA|848aa|up_0|NC_014926.1_1047164_1049708_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|113aa|down_0|NC_014926.1_1050554_1050893_-	NA	NA|466aa|down_1|NC_014926.1_1050834_1052232_-	pfam04233, Phage_Mu_F, Phage Mu protein F like protein	NA|331aa|down_2|NC_014926.1_1052404_1053397_+	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins	NA|399aa|down_3|NC_014926.1_1053447_1054644_+	pfam01941, AdoMet_Synthase, S-adenosylmethionine synthetase (AdoMet synthetase)	NA|631aa|down_4|NC_014926.1_1054664_1056557_-	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|344aa|down_5|NC_014926.1_1056598_1057630_-	TIGR03820, lys_2_3_AblA, lysine-2,3-aminomutase	NA|251aa|down_6|NC_014926.1_1057626_1058379_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|249aa|down_7|NC_014926.1_1058413_1059160_+	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain	NA|92aa|down_8|NC_014926.1_1059187_1059463_+	NA	NA|870aa|down_9|NC_014926.1_1059515_1062125_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed
GCF_000185805.1_ASM18580v1	NC_014926	Thermovibrio ammonificans HB-1, complete genome	5	1166769-1168349	5,4,5	CRISPRCasFinder,CRT,PILER-CR	no		csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	Orphan	GTTTAAATCCCACTTGTTCAAATAAAAC,GTTTAAATCCCACTTGTTCAAATAAAAC,GTTTTATTTGAACAAGTGGGATTTAAAC	28,28,28	0	0	NA	NA	NA:NA:NA	24,23,23	24	Orphan	csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	NA|194aa|up_1|NC_014926.1_1163650_1164232_+,NA|209aa|down_4|NC_014926.1_1177391_1178018_-,NA|133aa|down_9|NC_014926.1_1181260_1181659_+	NA|66aa|up_9|NC_014926.1_1156345_1156543_+	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|118aa|up_8|NC_014926.1_1156609_1156963_+	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|371aa|up_7|NC_014926.1_1156984_1158097_-	COG2309, AmpS, Leucyl aminopeptidase (aminopeptidase T) [Amino acid transport and metabolism]	NA|587aa|up_6|NC_014926.1_1158102_1159863_-	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|217aa|up_5|NC_014926.1_1159859_1160510_-	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase	NA|192aa|up_4|NC_014926.1_1160509_1161085_-	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95	NA|258aa|up_3|NC_014926.1_1160969_1161743_+	cd16325, LolA, LolA, a periplasmic chaperone	NA|585aa|up_2|NC_014926.1_1161720_1163475_-	cd08500, PBP2_NikA_DppA_OppA_like_4, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|194aa|up_1|NC_014926.1_1163650_1164232_+	NA	NA|805aa|up_0|NC_014926.1_1164289_1166704_+	PRK14939, gyrB, DNA gyrase subunit B; Provisional	NA|220aa|down_0|NC_014926.1_1173969_1174629_-	PRK00023, cmk, (d)CMP kinase	NA|439aa|down_1|NC_014926.1_1174629_1175946_-	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated	NA|192aa|down_2|NC_014926.1_1175945_1176521_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|270aa|down_3|NC_014926.1_1176570_1177380_-	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional	NA|209aa|down_4|NC_014926.1_1177391_1178018_-	NA	NA|252aa|down_5|NC_014926.1_1178043_1178799_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|222aa|down_6|NC_014926.1_1178864_1179530_+	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|293aa|down_7|NC_014926.1_1179477_1180356_+	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|306aa|down_8|NC_014926.1_1180333_1181251_+	PRK00089, era, GTPase Era; Reviewed	NA|133aa|down_9|NC_014926.1_1181260_1181659_+	NA
GCF_000185805.1_ASM18580v1	NC_014926	Thermovibrio ammonificans HB-1, complete genome	6	1211026-1212134	6,6,5	PILER-CR,CRISPRCasFinder,CRT	no		csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	Orphan	GTTGAAATGCCCGAAAAAGTAGACGGGATTGCGAC,GTTGAAATGCCCGAAAAAGTAGACGGGATTGCGAC,GTTGAAATGCCCGAAAAAGTAGACGGGATTGCGAC	35,35,35	0	0	NA	NA	NA:NA:NA	12,14,13	14	Orphan	csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	NA|120aa|up_3|NC_014926.1_1204731_1205091_-,NA|46aa|down_5|NC_014926.1_1216750_1216888_-,NA|85aa|down_8|NC_014926.1_1218539_1218794_-	NA|151aa|up_9|NC_014926.1_1199031_1199484_+	pfam02502, LacAB_rpiB, Ribose/Galactose Isomerase	NA|419aa|up_8|NC_014926.1_1199488_1200745_+	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|272aa|up_7|NC_014926.1_1200853_1201669_+	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	NA|549aa|up_6|NC_014926.1_1201736_1203383_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|97aa|up_5|NC_014926.1_1203408_1203699_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|305aa|up_4|NC_014926.1_1203817_1204732_-	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|120aa|up_3|NC_014926.1_1204731_1205091_-	NA	NA|396aa|up_2|NC_014926.1_1205100_1206288_-	smart00338, BRLZ, basic region leucin zipper	NA|1173aa|up_1|NC_014926.1_1206297_1209816_-	PRK14991, PRK14991, tetrathionate reductase subunit TtrA	NA|249aa|up_0|NC_014926.1_1209965_1210712_+	pfam09923, DUF2155, Uncharacterized protein conserved in bacteria (DUF2155)	NA|135aa|down_0|NC_014926.1_1212251_1212656_+	cd17775, CBS_pair_bact_arch, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains  present in bacteria and archaea	NA|243aa|down_1|NC_014926.1_1212656_1213385_+	PRK00104, scpA, segregation and condensation protein A; Reviewed	NA|264aa|down_2|NC_014926.1_1213353_1214145_-	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|545aa|down_3|NC_014926.1_1214120_1215755_-	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins	NA|281aa|down_4|NC_014926.1_1215908_1216751_-	COG0348, NapH, Polyferredoxin [Energy production and conversion]	NA|46aa|down_5|NC_014926.1_1216750_1216888_-	NA	NA|295aa|down_6|NC_014926.1_1216880_1217765_-	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|260aa|down_7|NC_014926.1_1217776_1218556_-	cd01639, IMPase, IMPase, inositol monophosphatase and related domains	NA|85aa|down_8|NC_014926.1_1218539_1218794_-	NA	NA|213aa|down_9|NC_014926.1_1218854_1219493_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_000185805.1_ASM18580v1	NC_014926	Thermovibrio ammonificans HB-1, complete genome	7	1493917-1494257	7,6,7	CRISPRCasFinder,CRT,PILER-CR	no	csx1,cas2,cas1	csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	Unclear	GTCGCAATCCCGTCTACTTTTTCGGGCATTTCAAC,GTCGCAATCCCGTCTACTTTTTCGGGCATTTCAAC,GTTGAAATGCCCGAAAAAGTAGACGGGATTGCGAC	35,35,35	0	0	NA	NA	NA:NA:NA	4,4,3	4	Unclear	csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	NA,NA|84aa|down_2|NC_014926.1_1495999_1496251_-,NA|239aa|down_3|NC_014926.1_1496260_1496977_-,NA|101aa|down_7|NC_014926.1_1501008_1501311_+,NA|157aa|down_9|NC_014926.1_1502820_1503291_+	NA|262aa|up_9|NC_014926.1_1485838_1486624_-	pfam10670, DUF4198, Domain of unknown function (DUF4198)	NA|431aa|up_8|NC_014926.1_1486749_1488042_+	pfam04966, OprB, Carbohydrate-selective porin, OprB family	csx1|235aa|up_7|NC_014926.1_1488065_1488770_-	cd09728, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	csx1|146aa|up_6|NC_014926.1_1488766_1489204_-	cd09660, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|285aa|up_5|NC_014926.1_1489360_1490215_-	COG1313, PflX, Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins [General function prediction only]	NA|294aa|up_4|NC_014926.1_1490224_1491106_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|402aa|up_3|NC_014926.1_1491095_1492301_-	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|273aa|up_2|NC_014926.1_1492358_1493177_+	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region	cas2|89aa|up_1|NC_014926.1_1493173_1493440_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas2|110aa|up_0|NC_014926.1_1493403_1493733_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas2|210aa|down_0|NC_014926.1_1494416_1495046_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|305aa|down_1|NC_014926.1_1495049_1495964_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|84aa|down_2|NC_014926.1_1495999_1496251_-	NA	NA|239aa|down_3|NC_014926.1_1496260_1496977_-	NA	NA|149aa|down_4|NC_014926.1_1497077_1497524_+	cd06971, PgpA, Phosphatidylglycerophosphatase A; a bacterial membrane-associated enzyme involved in lipid metabolism	NA|473aa|down_5|NC_014926.1_1497516_1498935_+	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|619aa|down_6|NC_014926.1_1498946_1500803_+	PRK09282, PRK09282, pyruvate carboxylase subunit B; Validated	NA|101aa|down_7|NC_014926.1_1501008_1501311_+	NA	NA|500aa|down_8|NC_014926.1_1501310_1502810_+	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|157aa|down_9|NC_014926.1_1502820_1503291_+	NA
GCF_000185805.1_ASM18580v1	NC_014926	Thermovibrio ammonificans HB-1, complete genome	8	1539364-1539979	8,8,7	PILER-CR,CRISPRCasFinder,CRT	no		csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	Orphan	GTTTTATCTGAACAAGTGGGATTTAAAC,GTTTAAATCCCACTTGTTCAGATAAAAC,GTTTAAATCCCACTTGTTCAGATAAAAC	28,28,28	1	1	1539914-1539951	NC_014917.1_28196-28159	NA:NA:NA	9,9,9	9	Orphan	csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	NA|73aa|up_3|NC_014926.1_1535699_1535918_+,NA	NA|173aa|up_9|NC_014926.1_1530839_1531358_+	COG1936, COG1936, Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism]	NA|445aa|up_8|NC_014926.1_1531323_1532658_+	PRK14902, PRK14902, 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA|214aa|up_7|NC_014926.1_1532659_1533301_+	COG3434, COG3434, Predicted signal transduction protein containing EAL and modified HD-GYP domains [Signal transduction mechanisms]	NA|217aa|up_6|NC_014926.1_1533332_1533983_+	COG3434, COG3434, Predicted signal transduction protein containing EAL and modified HD-GYP domains [Signal transduction mechanisms]	NA|389aa|up_5|NC_014926.1_1533972_1535139_-	pfam01142, TruD, tRNA pseudouridine synthase D (TruD)	NA|176aa|up_4|NC_014926.1_1535104_1535632_-	cd07503, HAD_HisB-N, histidinol phosphate phosphatase and related phosphatases	NA|73aa|up_3|NC_014926.1_1535699_1535918_+	NA	NA|274aa|up_2|NC_014926.1_1535943_1536765_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|248aa|up_1|NC_014926.1_1536814_1537558_-	cd03124, alpha_CA_prokaryotic_like, Carbonic anhydrase alpha, prokaryotic-like subfamily	NA|549aa|up_0|NC_014926.1_1537652_1539299_+	COG1001, AdeC, Adenine deaminase [Nucleotide transport and metabolism]	NA|1486aa|down_0|NC_014926.1_1540283_1544741_-	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional	NA|1450aa|down_1|NC_014926.1_1544812_1549162_-	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed	NA|126aa|down_2|NC_014926.1_1549277_1549655_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|180aa|down_3|NC_014926.1_1549700_1550240_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|241aa|down_4|NC_014926.1_1550418_1551141_-	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|142aa|down_5|NC_014926.1_1551197_1551623_-	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|247aa|down_6|NC_014926.1_1551639_1552380_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|61aa|down_7|NC_014926.1_1552399_1552582_-	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex	NA|55aa|down_8|NC_014926.1_1552750_1552915_-	PRK00595, rpmG, 50S ribosomal protein L33; Validated	NA|399aa|down_9|NC_014926.1_1552964_1554161_-	PRK00049, PRK00049, elongation factor Tu; Reviewed
GCF_000185805.1_ASM18580v1	NC_014926	Thermovibrio ammonificans HB-1, complete genome	9	1609896-1610638	9,9,8,10	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no		csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	Orphan	GTTTTATTTGAACAAGTGGGATTTAAAC,GTTTTATTTGAACAAGTGGGATTTAAAC,GTTTTATTTGAACAAGTGGGATTTAAAC,CGGTTTTATCTGAACAAGTGGGATT	28,28,28,25	0	0	NA	NA	NA:NA:NA:NA	8,9,9,8	9	Orphan	csa3,csx1,Cas9_archaeal,cas3,csx3,cmr3gr5,cmr5gr11,cmr4gr7,cas10,cmr6gr7,cmr1gr7,c2c10_CAS-V-U3,cas6,csm5gr7,csm4gr5,csm3gr7,RT,cas3HD,cas2,cas1,cas8b2,cas7,cas5,cas4	NA|328aa|up_8|NC_014926.1_1595001_1595985_+,NA|175aa|up_7|NC_014926.1_1595987_1596512_+,NA|88aa|up_2|NC_014926.1_1600705_1600969_+,NA|153aa|up_0|NC_014926.1_1603395_1603854_+,NA|70aa|down_0|NC_014926.1_1610688_1610898_-,NA|107aa|down_4|NC_014926.1_1613597_1613918_-,NA|171aa|down_7|NC_014926.1_1614763_1615276_-,NA|126aa|down_8|NC_014926.1_1615328_1615706_-,NA|173aa|down_9|NC_014926.1_1615721_1616240_-	NA|405aa|up_9|NC_014926.1_1593708_1594923_+	pfam01837, HcyBio, Homocysteine biosynthesis enzyme, sulfur-incorporation	NA|328aa|up_8|NC_014926.1_1595001_1595985_+	NA	NA|175aa|up_7|NC_014926.1_1595987_1596512_+	NA	NA|282aa|up_6|NC_014926.1_1596953_1597799_-	COG1947, IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism]	NA|344aa|up_5|NC_014926.1_1597827_1598859_+	cd10969, CE4_Ecf1_like_5s, Putative catalytic NodB homology domain of a hypothetical protein Ecf1 from Escherichia coli and similar proteins	NA|256aa|up_4|NC_014926.1_1598855_1599623_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|363aa|up_3|NC_014926.1_1599591_1600680_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|88aa|up_2|NC_014926.1_1600705_1600969_+	NA	NA|770aa|up_1|NC_014926.1_1601075_1603385_+	COG1198, PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]	NA|153aa|up_0|NC_014926.1_1603395_1603854_+	NA	NA|70aa|down_0|NC_014926.1_1610688_1610898_-	NA	NA|281aa|down_1|NC_014926.1_1610977_1611820_-	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal	NA|488aa|down_2|NC_014926.1_1611837_1613301_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|97aa|down_3|NC_014926.1_1613310_1613601_-	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|107aa|down_4|NC_014926.1_1613597_1613918_-	NA	NA|69aa|down_5|NC_014926.1_1613938_1614145_+	cd17506, Ubl_SAMP2_like, ubiquitin-like (Ubl) domain found in small archaeal modifier protein (SAMP2)	NA|139aa|down_6|NC_014926.1_1614147_1614564_+	cd16964, YqgF, putative pre-16S rRNA nuclease YqgF and RuvX family	NA|171aa|down_7|NC_014926.1_1614763_1615276_-	NA	NA|126aa|down_8|NC_014926.1_1615328_1615706_-	NA	NA|173aa|down_9|NC_014926.1_1615721_1616240_-	NA
