The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_015555	Thermoanaerobacterium xylanolyticum LX-11, complete genome	2534358	19809	28678	2534358	tRNA	Staphylococcus_phage(50.0%)	8	NA	NA
WP_013786847.1|19809_21465_+	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	32.8	2.2e-66
WP_083815347.1|21698_22769_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	38.6	1.2e-54
WP_013786849.1|22777_23398_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	41.9	1.5e-33
WP_013786850.1|23412_24603_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	51.2	8.7e-110
WP_013786851.1|24626_25097_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	58.6	2.5e-44
WP_013786852.1|25140_26205_-	sporulation integral membrane protein YtvI	NA	NA	NA	NA	NA
WP_013786854.1|26604_27141_+	signal peptidase I	NA	NA	NA	NA	NA
WP_013786855.1|27406_28678_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	50.2	6.3e-98
>prophage 2
NC_015555	Thermoanaerobacterium xylanolyticum LX-11, complete genome	2534358	150104	160227	2534358		Hokovirus(28.57%)	9	NA	NA
WP_013786963.1|150104_151118_+	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	28.7	8.7e-26
WP_013786964.1|151141_152539_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
WP_013786965.1|152696_153515_+	pur operon repressor	NA	A0A1X9I6E2	Streptococcus_phage	29.3	3.6e-06
WP_013786966.1|153717_153999_+	septation protein SpoVG	NA	NA	NA	NA	NA
WP_013786967.1|154108_155482_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0N7G7I9	Chrysochromulina_ericina_virus	38.2	6.2e-35
WP_013786968.1|155484_156435_+	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.8	2.1e-45
WP_013786969.1|156525_157209_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	43.7	9.9e-50
WP_013786970.1|157210_158632_+	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	29.6	3.2e-18
WP_013786971.1|158871_160227_+	PDZ domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	31.4	6.6e-21
>prophage 3
NC_015555	Thermoanaerobacterium xylanolyticum LX-11, complete genome	2534358	743504	756075	2534358		Prochlorococcus_phage(20.0%)	10	NA	NA
WP_013787500.1|743504_745130_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	55.6	1.2e-157
WP_013787501.1|745391_746846_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	42.4	6.3e-102
WP_013787502.1|746858_748397_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	3.4e-21
WP_013787503.1|748771_750220_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	31.5	7.0e-45
WP_013787504.1|750299_750791_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.9	1.1e-26
WP_013787505.1|750790_751498_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D7SPE1	Cyanophage	42.0	1.1e-40
WP_013787506.1|751507_752905_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.7	1.4e-61
WP_013787507.1|752921_753932_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	45.8	8.8e-71
WP_013787508.1|753928_754546_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.4	1.9e-23
WP_013787509.1|754548_756075_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	48.0	1.9e-69
>prophage 4
NC_015555	Thermoanaerobacterium xylanolyticum LX-11, complete genome	2534358	1306245	1315987	2534358	tRNA	Wolbachia_phage(16.67%)	10	NA	NA
WP_013788020.1|1306245_1308075_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	33.0	6.9e-74
WP_013788021.1|1308086_1309037_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_013788022.1|1309079_1309334_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_013788023.1|1309401_1310199_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_013788024.1|1310195_1310660_+	ribonuclease HI	NA	A0A0H3UZB5	Geobacillus_virus	49.7	5.3e-31
WP_013788025.1|1310745_1311729_+	tyrosine recombinase XerC	NA	S5M9V8	Brevibacillus_phage	27.4	2.1e-16
WP_013788026.1|1311787_1312411_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	54.2	1.9e-15
WP_013788027.1|1312435_1313722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013788028.1|1313726_1314617_-	stage V sporulation protein K	NA	G3MAX6	Bacillus_virus	46.6	7.3e-53
WP_013788029.1|1314691_1315987_-|tRNA	asparagine--tRNA ligase	tRNA	L7RCX2	Acanthamoeba_polyphaga_moumouvirus	34.9	4.6e-64
>prophage 5
NC_015555	Thermoanaerobacterium xylanolyticum LX-11, complete genome	2534358	1877331	1936569	2534358	coat,protease,transposase	Bacillus_virus(30.0%)	54	NA	NA
WP_013786953.1|1877331_1877772_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	37.5	2.1e-21
WP_083815339.1|1877844_1878522_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_013788561.1|1878535_1879168_-	sugar transferase	NA	NA	NA	NA	NA
WP_013788563.1|1879773_1880664_-	DUF4351 domain-containing protein	NA	NA	NA	NA	NA
WP_013788564.1|1880698_1881637_-	DUF4351 domain-containing protein	NA	NA	NA	NA	NA
WP_013788565.1|1881907_1882474_-	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA	NA
WP_013788566.1|1882475_1883354_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA	NA
WP_013788567.1|1883464_1885972_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013788568.1|1886158_1887175_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_041592116.1|1887241_1887988_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.9	4.6e-32
WP_013788570.1|1887980_1888790_+	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	23.9	1.7e-16
WP_013788571.1|1888876_1890514_+	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	37.0	7.6e-88
WP_013788572.1|1890533_1891400_+	DMT family transporter	NA	NA	NA	NA	NA
WP_013788573.1|1891410_1892868_-	peptidase M4	NA	NA	NA	NA	NA
WP_013788574.1|1892949_1893363_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_013788575.1|1893373_1894759_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_013788576.1|1894793_1895651_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_013788577.1|1895650_1897171_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_013788578.1|1897199_1897733_-	ATP synthase F1 subunit delta	NA	NA	NA	NA	NA
WP_013788579.1|1897720_1898209_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_013788580.1|1898231_1898456_-	ATP synthase F0 subunit C	NA	NA	NA	NA	NA
WP_013788581.1|1898544_1899201_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_013788582.1|1899445_1900048_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_013788583.1|1900044_1902369_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	44.8	1.1e-177
WP_013788584.1|1902439_1903300_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_013788585.1|1903361_1904636_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	64.6	1.1e-150
WP_013788586.1|1904656_1905241_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	52.6	1.3e-50
WP_013788587.1|1905245_1906544_-	trigger factor	NA	NA	NA	NA	NA
WP_013788588.1|1906665_1907577_-	ribonuclease Z	NA	NA	NA	NA	NA
WP_013788589.1|1907602_1908436_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	31.0	1.1e-26
WP_013788590.1|1908553_1909570_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013788591.1|1909727_1911086_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	32.1	1.5e-60
WP_013788592.1|1911230_1911413_+|coat	spore coat associated protein CotJA	coat	NA	NA	NA	NA
WP_013788593.1|1911415_1911676_+|coat	spore coat protein CotJB	coat	NA	NA	NA	NA
WP_013788594.1|1911688_1912261_+	manganese catalase family protein	NA	NA	NA	NA	NA
WP_013788595.1|1912279_1914679_-	homocysteine methyltransferase	NA	NA	NA	NA	NA
WP_013788596.1|1914701_1915604_-	5,10-methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
WP_013788597.1|1915902_1916832_+	DUF362 domain-containing protein	NA	NA	NA	NA	NA
WP_013788598.1|1916857_1917655_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA	NA
WP_013788599.1|1917748_1919104_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_013788600.1|1919168_1919666_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_013788601.1|1919796_1920294_+	nitroreductase family protein	NA	A0A1V0E011	Clostridioides_phage	34.5	3.1e-21
WP_013788602.1|1920413_1921640_+	peptidase T	NA	NA	NA	NA	NA
WP_013788603.1|1921666_1922440_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_013788604.1|1924463_1925132_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA	NA
WP_013788605.1|1925131_1927471_-	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
WP_013788606.1|1927592_1928555_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013788607.1|1928562_1929462_-	DUF1848 domain-containing protein	NA	NA	NA	NA	NA
WP_013788608.1|1929523_1929796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013788609.1|1929868_1931614_-	arsenical pump-driving ATPase	NA	NA	NA	NA	NA
WP_013788610.1|1931655_1931979_-	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA	NA
WP_013787204.1|1932339_1933713_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_013788611.1|1933900_1934776_+	nitroreductase	NA	NA	NA	NA	NA
WP_013788612.1|1934937_1936569_-|transposase	DDE transposase	transposase	NA	NA	NA	NA
>prophage 6
NC_015555	Thermoanaerobacterium xylanolyticum LX-11, complete genome	2534358	2415872	2481865	2534358	protease,transposase	Lactobacillus_phage(22.22%)	60	NA	NA
WP_013789026.1|2415872_2417090_+|transposase	IS110 family transposase	transposase	Q9JMN8	Wolbachia_phage	30.9	2.2e-47
WP_041592147.1|2417379_2417577_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013789027.1|2417543_2417861_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013789028.1|2417915_2418122_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013789029.1|2418140_2418413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013789030.1|2418447_2418867_+	TNT domain-containing protein	NA	NA	NA	NA	NA
WP_013789031.1|2418863_2419130_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013789032.1|2419343_2419907_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_013789033.1|2420010_2420193_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013789034.1|2420228_2420663_+	RDD family protein	NA	NA	NA	NA	NA
WP_013789036.1|2420899_2421481_+	DUF986 family protein	NA	NA	NA	NA	NA
WP_013786953.1|2421461_2421902_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	37.5	2.1e-21
WP_041592273.1|2422097_2422382_-	co-chaperone GroES	NA	NA	NA	NA	NA
WP_013789038.1|2422419_2422995_-	glutaredoxin	NA	NA	NA	NA	NA
WP_013789039.1|2423175_2423364_+	small, acid-soluble spore protein, H family	NA	NA	NA	NA	NA
WP_013789040.1|2424097_2425075_-	deoxyribodipyrimidine photo-lyase	NA	NA	NA	NA	NA
WP_013789041.1|2425133_2425760_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013789042.1|2426069_2428649_+	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_013789043.1|2428712_2430353_-	hydroxylamine reductase	NA	NA	NA	NA	NA
WP_013789044.1|2430494_2431484_-	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA	NA
WP_013789045.1|2431626_2432064_+	DMT family transporter	NA	NA	NA	NA	NA
WP_014757372.1|2432104_2432275_-	cytochrome c551	NA	NA	NA	NA	NA
WP_013789047.1|2432433_2432640_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013789048.1|2432686_2436949_-	2-hydroxyacyl-CoA dehydratase	NA	NA	NA	NA	NA
WP_013789049.1|2437071_2437743_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013789050.1|2438254_2439328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083815345.1|2439275_2439410_-	type II toxin-antitoxin system VapB family antitoxin	NA	NA	NA	NA	NA
WP_013789051.1|2439582_2439939_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_013789052.1|2440097_2440721_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_013789053.1|2440727_2441207_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_013789054.1|2441220_2441388_-	CxxH/CxxC protein	NA	NA	NA	NA	NA
WP_013789055.1|2441401_2442523_-|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	30.0	7.9e-12
WP_013789056.1|2442602_2443853_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_013789057.1|2443976_2444795_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013789058.1|2444810_2446055_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013789059.1|2446067_2446463_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013789060.1|2446607_2448305_-	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	34.6	3.3e-38
WP_013789061.1|2448294_2448990_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	42.1	4.2e-40
WP_013789062.1|2448996_2449812_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013789063.1|2449945_2451151_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	51.7	4.3e-24
WP_013789064.1|2451332_2452304_+	DnaD domain protein	NA	NA	NA	NA	NA
WP_013789065.1|2452296_2453277_+	DNA replication protein DnaC	NA	H7BWC4	unidentified_phage	34.1	1.5e-14
WP_013789066.1|2453273_2454716_-	M1 family metallopeptidase	NA	NA	NA	NA	NA
WP_013789067.1|2454855_2455467_+	sporulation membrane protein YtaF	NA	NA	NA	NA	NA
WP_013786953.1|2456871_2457312_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	37.5	2.1e-21
WP_013789068.1|2457496_2457676_-	DUF4926 domain-containing protein	NA	NA	NA	NA	NA
WP_013789069.1|2457728_2457983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013787204.1|2458949_2460323_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_013789070.1|2469952_2470708_-	CRISPR-associated endoribonuclease Cas6	NA	NA	NA	NA	NA
WP_013789071.1|2470718_2470982_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA	NA
WP_013789072.1|2470983_2471976_-	type I-B CRISPR-associated endonuclease Cas1	NA	NA	NA	NA	NA
WP_013789073.1|2471987_2472479_-	CRISPR-associated protein Cas4	NA	NA	NA	NA	NA
WP_013789074.1|2472497_2474714_-	CRISPR-associated helicase/endonuclease Cas3	NA	A0A2R2ZGW0	Clostridioides_phage	24.2	4.1e-28
WP_013789075.1|2474685_2475333_-	type I-B CRISPR-associated protein Cas5	NA	NA	NA	NA	NA
WP_013789076.1|2475339_2476356_-	type I-B CRISPR-associated protein Cas7/Cst2/DevR	NA	NA	NA	NA	NA
WP_013789077.1|2476374_2477754_-	type I-B CRISPR-associated protein Cas8b1/Cst1	NA	NA	NA	NA	NA
WP_013789078.1|2478081_2479134_+	DUF1646 domain-containing protein	NA	NA	NA	NA	NA
WP_013789079.1|2479197_2479869_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013789080.1|2479943_2480159_-	DUF2892 domain-containing protein	NA	NA	NA	NA	NA
WP_083815346.1|2481562_2481865_-|transposase	transposase	transposase	NA	NA	NA	NA
