The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019725	Xanthomonas perforans 91-118 chromosome, complete genome	4898349	2810462	2879170	4898349	tail,transposase,protease,tRNA	Bacillus_phage(21.43%)	55	NA	NA
WP_008573005.1|2810462_2811803_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	tRNA	NA	NA	NA	NA
WP_008573006.1|2811966_2812824_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_008573007.1|2813016_2815317_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_008573008.1|2815556_2816654_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA	NA
WP_033478680.1|2816805_2817594_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_008573117.1|2818244_2819201_-	TerC family protein	NA	K4F9T9	Cronobacter_phage	31.7	4.5e-32
WP_008573115.1|2819465_2820632_+	class I SAM-dependent rRNA methyltransferase	NA	NA	NA	NA	NA
WP_003482258.1|2820754_2821075_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008573114.1|2821355_2822609_+	peptidase M19	NA	NA	NA	NA	NA
WP_008573112.1|2823076_2824387_+	MFS transporter	NA	NA	NA	NA	NA
WP_008573111.1|2824412_2825582_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	39.3	1.1e-43
WP_008573108.1|2825816_2827007_+	CdaR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033478697.1|2827119_2828868_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	32.3	8.2e-16
WP_008573104.1|2828976_2829366_+	DUF2628 domain-containing protein	NA	NA	NA	NA	NA
WP_008573101.1|2830031_2832965_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.9	9.3e-113
WP_033478695.1|2833195_2835670_+	glycoside hydrolase family 92 protein	NA	NA	NA	NA	NA
WP_008573097.1|2835919_2837335_-	amino acid permease	NA	NA	NA	NA	NA
WP_008573095.1|2837550_2837931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008573093.1|2838050_2838671_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_008573091.1|2838832_2839063_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008573089.1|2839399_2840332_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_008573087.1|2840427_2841435_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033479450.1|2841571_2843152_+	DNA recombination protein RmuC	NA	NA	NA	NA	NA
WP_109290613.1|2843343_2843745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033478691.1|2843898_2844450_+	glutathione peroxidase	NA	A0A1S7DM81	Molluscum_contagiosum_virus	34.4	6.2e-10
WP_008573078.1|2844508_2844988_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_046932685.1|2845127_2846183_-	VacJ family lipoprotein	NA	NA	NA	NA	NA
WP_008575279.1|2846193_2846484_-	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_008575277.1|2846473_2847136_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_008575276.1|2847132_2847678_-	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA	NA
WP_008575275.1|2847689_2848439_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_008575273.1|2848438_2849233_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.8	1.7e-08
WP_008575271.1|2849615_2849903_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008575269.1|2849921_2850479_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_008575267.1|2850483_2851020_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_008575266.1|2851080_2851608_-|tail	phage tail protein	tail	A0A218M5J0	Arthrobacter_phage	34.5	7.2e-16
WP_011349183.1|2851674_2852220_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_046932683.1|2852486_2857295_+	autotransporter domain-containing protein	NA	F5B3Z3	Synechococcus_phage	46.7	6.8e-20
WP_008575260.1|2857649_2861063_+	exodeoxyribonuclease V subunit gamma	NA	NA	NA	NA	NA
WP_046932682.1|2861059_2865112_+	exodeoxyribonuclease V subunit beta	NA	S5MMD7	Bacillus_phage	21.5	8.3e-11
WP_046932680.1|2865314_2867690_+	AAA family ATPase	NA	A0A0K2FLP8	Brevibacillus_phage	24.8	1.2e-09
WP_074053292.1|2867787_2868027_+	plasmid maintenance system killer protein	NA	A0A222YWE2	Escherichia_phage	41.3	9.5e-08
WP_008571772.1|2868044_2868335_+	HigA family addiction module antidote protein	NA	M9MUN2	Rhodococcus_phage	52.5	2.2e-14
WP_008571771.1|2868683_2870078_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005912356.1|2870180_2870279_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033478553.1|2870427_2872353_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003482333.1|2872688_2873021_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033478552.1|2873586_2874105_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008571767.1|2874469_2875213_-	glucose 1-dehydrogenase	NA	A0A0M4JSW6	Mollivirus	29.8	1.7e-15
WP_008571766.1|2875296_2875869_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_008571765.1|2875985_2876555_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_008571764.1|2876618_2877095_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_031425208.1|2877266_2877701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077708913.1|2878313_2878958_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_033478871.1|2878954_2879170_+|transposase	transposase	transposase	Q6J1X2	Lactobacillus_phage	53.0	1.7e-11
>prophage 2
NZ_CP019725	Xanthomonas perforans 91-118 chromosome, complete genome	4898349	3479445	3529132	4898349	terminase,head,plate,tail,tRNA,integrase,capsid,portal,holin	Stenotrophomonas_phage(60.0%)	62	3479943:3479960	3509169:3509186
WP_008572821.1|3479445_3480369_+|tRNA	methionyl-tRNA formyltransferase	tRNA	NA	NA	NA	NA
3479943:3479960	attL	GCTGGCTGCGCTGGGCGC	NA	NA	NA	NA
WP_008572819.1|3480368_3481679_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_008572818.1|3481727_3483449_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_029820470.1|3483614_3484892_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_008572814.1|3485088_3485913_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_074053325.1|3485913_3486972_+	CDP-glycerol glycerophosphotransferase	NA	NA	NA	NA	NA
WP_008572809.1|3487132_3488638_-	PH domain-containing protein	NA	NA	NA	NA	NA
WP_029820467.1|3488634_3489111_-	PH domain-containing protein	NA	NA	NA	NA	NA
WP_008572805.1|3489249_3490383_-	GTP cyclohydrolase II RibA	NA	A0A2H4PQS2	Staphylococcus_phage	40.2	6.1e-28
WP_074038445.1|3490379_3490589_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008572803.1|3490628_3491150_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_008572801.1|3491159_3492074_-	lauroyl acyltransferase	NA	NA	NA	NA	NA
WP_008572800.1|3492174_3492615_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_008572798.1|3492723_3494601_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	35.5	1.8e-37
WP_011348769.1|3494794_3495115_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033478669.1|3495530_3496718_-|integrase	integrase	integrase	V9IQN0	Stenotrophomonas_phage	50.9	7.3e-109
WP_008572791.1|3497144_3497348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008572787.1|3497413_3497638_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008572785.1|3497634_3497907_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008572783.1|3497899_3498082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077708921.1|3498074_3498449_-	hypothetical protein	NA	V9IQL6	Stenotrophomonas_phage	46.1	2.4e-18
WP_008572778.1|3498578_3498851_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008572775.1|3498850_3499123_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014091199.1|3499134_3499353_-	hypothetical protein	NA	NA	NA	NA	NA
WP_074053538.1|3499679_3502352_-	bifunctional DNA primase/helicase	NA	V9IQW5	Stenotrophomonas_phage	69.4	0.0e+00
WP_008572770.1|3502385_3502598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008572768.1|3502594_3502873_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008572766.1|3502883_3503204_-	hypothetical protein	NA	V9IQW3	Stenotrophomonas_phage	58.7	2.0e-24
WP_008572763.1|3503206_3503464_-	DNA-binding protein	NA	A0A2H4JE67	uncultured_Caudovirales_phage	44.6	6.6e-07
WP_008572760.1|3503534_3503972_+	helix-turn-helix transcriptional regulator	NA	E5E3P4	Burkholderia_phage	30.5	2.1e-08
WP_077708923.1|3504239_3505373_-	hypothetical protein	NA	NA	NA	NA	NA
WP_126952649.1|3505372_3505822_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008572755.1|3505955_3506945_-	phage late control D family protein	NA	A0A2H4JAV0	uncultured_Caudovirales_phage	49.4	4.7e-85
WP_008572753.1|3506941_3507343_-|tail	phage tail protein	tail	V9IQX3	Stenotrophomonas_phage	62.1	4.6e-39
WP_008572751.1|3507355_3510226_-|tail	phage tail tape measure protein	tail	V9IQL1	Stenotrophomonas_phage	48.8	3.4e-200
3509169:3509186	attR	GCGCCCAGCGCAGCCAGC	NA	NA	NA	NA
WP_005922203.1|3510255_3510369_-|tail	GpE family phage tail protein	tail	A0A0M4R2P3	Salmonella_phage	68.6	4.2e-06
WP_008572745.1|3510377_3510680_-|tail	phage tail assembly protein	tail	V9IQM4	Stenotrophomonas_phage	67.4	2.2e-25
WP_008572743.1|3510725_3511235_-|tail	phage major tail tube protein	tail	V9IQX1	Stenotrophomonas_phage	80.5	6.2e-73
WP_008572742.1|3511264_3512431_-|tail	phage tail sheath protein	tail	E5FFG9	Burkholderia_phage	62.7	4.2e-133
WP_008572739.1|3512442_3512802_-|plate	baseplate assembly protein	plate	V9IQW0	Stenotrophomonas_phage	64.4	7.3e-36
WP_008572737.1|3512798_3513362_-|plate	phage baseplate assembly protein V	plate	Q9ZXL0	Pseudomonas_virus	47.5	1.8e-25
WP_008572736.1|3513505_3514180_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008572734.1|3514183_3514477_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008572732.1|3514554_3516354_-	hypothetical protein	NA	V9IQX0	Stenotrophomonas_phage	38.5	1.4e-82
WP_033478665.1|3516366_3516912_-|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	56.0	4.2e-51
WP_008572729.1|3516904_3517795_-|plate	baseplate assembly protein	plate	V9IQV9	Stenotrophomonas_phage	52.7	1.3e-81
WP_008572727.1|3518212_3519292_+	type III secretion system YopJ family effector AvrXv4	NA	NA	NA	NA	NA
WP_008572725.1|3519299_3519749_-	phage virion morphogenesis protein	NA	V9IQH0	Stenotrophomonas_phage	52.7	2.4e-36
WP_008572723.1|3519736_3520156_-|tail	phage tail protein	tail	A0A2H4J906	uncultured_Caudovirales_phage	65.9	6.7e-41
WP_008572722.1|3520152_3520641_-	hypothetical protein	NA	V9IQW8	Stenotrophomonas_phage	53.1	1.5e-28
WP_074053328.1|3520640_3521282_-	glycoside hydrolase family 19 protein	NA	V9IQK6	Stenotrophomonas_phage	60.9	4.6e-49
WP_008572717.1|3521278_3521554_-|holin	phage holin family protein	holin	V9IQV8	Stenotrophomonas_phage	59.8	2.3e-21
WP_005929454.1|3521546_3521903_-	membrane protein	NA	V9IQG9	Stenotrophomonas_phage	56.1	3.5e-22
WP_008572714.1|3521907_3522117_-|tail	tail protein	tail	K4PAW7	Burkholderia_phage	58.0	2.0e-14
WP_008572712.1|3522116_3522584_-|head	head completion/stabilization protein	head	V9IQW6	Stenotrophomonas_phage	49.7	1.8e-31
WP_008572710.1|3522682_3523402_-|terminase	terminase	terminase	Q9ZXM2	Pseudomonas_virus	63.8	3.1e-70
WP_008572708.1|3523405_3524425_-|capsid	phage major capsid protein, P2 family	capsid	Q9ZXM3	Pseudomonas_virus	70.0	7.9e-136
WP_008572705.1|3524471_3525314_-|capsid	GPO family capsid scaffolding protein	capsid	A0A2H4J928	uncultured_Caudovirales_phage	54.4	1.1e-69
WP_074053329.1|3525435_3527220_+|terminase	terminase ATPase subunit family protein	terminase	V9IQL5	Stenotrophomonas_phage	76.1	1.5e-270
WP_008572701.1|3527219_3528242_+|portal	phage portal protein	portal	A0A2H4J922	uncultured_Caudovirales_phage	71.8	3.1e-140
WP_043908800.1|3528267_3528513_+	Com family DNA-binding transcriptional regulator	NA	V9IQK2	Stenotrophomonas_phage	53.8	6.3e-15
WP_046932103.1|3528430_3529132_+	site-specific DNA-methyltransferase	NA	V9IQV5	Stenotrophomonas_phage	74.8	7.2e-104
>prophage 3
NZ_CP019725	Xanthomonas perforans 91-118 chromosome, complete genome	4898349	3724303	3732346	4898349		Enterobacteria_phage(42.86%)	7	NA	NA
WP_031424434.1|3724303_3725359_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	47.7	1.6e-83
WP_031424432.1|3725414_3726302_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	57.8	1.3e-94
WP_011052372.1|3726298_3726856_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.1	4.6e-45
WP_008576951.1|3726852_3727752_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.5	2.0e-26
WP_008576953.1|3728092_3729259_+	nucleotide sugar dehydrogenase	NA	M1HV26	Paramecium_bursaria_Chlorella_virus	57.6	4.7e-116
WP_008576956.1|3729548_3730952_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.8	1.9e-47
WP_008576959.1|3730999_3732346_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	27.2	4.4e-33
