assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000196155.1_ASM19615v1	NC_005126	Photorhabdus laumondii subsp. laumondii TTO1, complete genome	1	609622-609753	1	CRISPRCasFinder	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	GACGATAATACCTGCTCAGTCTGTTGACCTGTAGGTGAAAGT	42	0	0	NA	NA	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	NA|77aa|up_8|NC_005126.1_594565_594796_-,NA|112aa|up_7|NC_005126.1_596755_597091_-,NA|86aa|up_5|NC_005126.1_598513_598771_+,NA|69aa|down_1|NC_005126.1_620516_620723_-	NA|1007aa|up_9|NC_005126.1_591408_594429_-	pfam13332, Fil_haemagg_2, Haemagluttinin repeat	NA|77aa|up_8|NC_005126.1_594565_594796_-	NA	NA|112aa|up_7|NC_005126.1_596755_597091_-	NA	NA|352aa|up_6|NC_005126.1_597087_598143_-	pfam13930, Endonuclea_NS_2, DNA/RNA non-specific endonuclease	NA|86aa|up_5|NC_005126.1_598513_598771_+	NA	NA|377aa|up_4|NC_005126.1_599000_600131_-	PRK01287, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|1105aa|up_3|NC_005126.1_600117_603432_-	TIGR01391, DNA_primase, DNA primase, catalytic core	NA|124aa|up_2|NC_005126.1_603583_603955_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|81aa|up_1|NC_005126.1_604053_604296_+	pfam08845, SymE_toxin, Toxin SymE, type I toxin-antitoxin system	NA|140aa|up_0|NC_005126.1_604341_604761_-	pfam14567, SUKH_5, SMI1-KNR4 cell-wall	NA|555aa|down_0|NC_005126.1_618576_620241_-	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|69aa|down_1|NC_005126.1_620516_620723_-	NA	NA|215aa|down_2|NC_005126.1_621004_621649_-	PRK11246, PRK11246, YtjB family periplasmic protein	NA|326aa|down_3|NC_005126.1_621764_622742_+	PRK11133, serB, phosphoserine phosphatase; Provisional	NA|461aa|down_4|NC_005126.1_622888_624271_+	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|412aa|down_5|NC_005126.1_624284_625520_+	PRK08099, PRK08099, multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR	NA|249aa|down_6|NC_005126.1_626194_626941_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|556aa|down_7|NC_005126.1_626979_628647_-	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|639aa|down_8|NC_005126.1_629143_631060_+	PRK11619, PRK11619, lytic murein transglycosylase; Provisional	NA|107aa|down_9|NC_005126.1_631119_631440_+	PRK01381, PRK01381, trp operon repressor
GCF_000196155.1_ASM19615v1	NC_005126	Photorhabdus laumondii subsp. laumondii TTO1, complete genome	2	2016491-2016583	2	CRISPRCasFinder	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	CTCACCCCGGTCACATAGTTATCTAT	26	1	54	2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557|2016517-2016557	NC_005126.1_2789246-2789206|NC_005126.1_3506839-3506799|NC_005126.1_3993311-3993271|NC_005126.1_1844552-1844592|NC_005126.1_3400967-3401007|NC_005126.1_4167707-4167747|NC_005126.1_4407052-4407092|NC_005126.1_5420992-5421032|NC_005126.1_323753-323713|NC_005126.1_493207-493167|NC_005126.1_501101-501061|NC_005126.1_528114-528074|NC_005126.1_622866-622826|NC_005126.1_829895-829855|NC_005126.1_1049239-1049199|NC_005126.1_1154525-1154485|NC_005126.1_1565915-1565875|NC_005126.1_1804211-1804171|NC_005126.1_1937006-1936966|NC_005126.1_2401082-2401042|NC_005126.1_2430539-2430499|NC_005126.1_2955584-2955544|NC_005126.1_4004178-4004138|NC_005126.1_4177584-4177544|NC_005126.1_4403552-4403512|NC_005126.1_4423699-4423659|NC_005126.1_4762845-4762805|NC_005126.1_5065787-5065747|NC_005126.1_5618660-5618620|NC_005126.1_5641929-5641889|NC_005126.1_268766-268806|NC_005126.1_620840-620880|NC_005126.1_868344-868384|NC_005126.1_948661-948701|NC_005126.1_1086595-1086635|NC_005126.1_1428388-1428428|NC_005126.1_1691127-1691167|NC_005126.1_1879244-1879284|NC_005126.1_2015735-2015775|NC_005126.1_2119122-2119162|NC_005126.1_2355770-2355810|NC_005126.1_2420013-2420053|NC_005126.1_2778720-2778760|NC_005126.1_3233873-3233913|NC_005126.1_3307502-3307542|NC_005126.1_3720908-3720948|NC_005126.1_3906924-3906964|NC_005126.1_4107997-4108037|NC_005126.1_4243210-4243250|NC_005126.1_4453695-4453735|NC_005126.1_4497909-4497949|NC_005126.1_5111433-5111473|NC_005126.1_5191635-5191675|NC_005126.1_5519158-5519198	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	NA|139aa|up_9|NC_005126.1_2007566_2007983_-,NA|228aa|up_6|NC_005126.1_2010036_2010720_-,NA|60aa|up_5|NC_005126.1_2010706_2010886_-,NA|316aa|down_0|NC_005126.1_2016642_2017590_-,NA|521aa|down_3|NC_005126.1_2021794_2023357_-,NA|317aa|down_5|NC_005126.1_2024610_2025561_-,NA|969aa|down_6|NC_005126.1_2025762_2028669_-,NA|901aa|down_7|NC_005126.1_2028665_2031368_-,NA|139aa|down_8|NC_005126.1_2031464_2031881_-	NA|139aa|up_9|NC_005126.1_2007566_2007983_-	NA	NA|149aa|up_8|NC_005126.1_2007979_2008426_-	pfam04965, GPW_gp25, Gene 25-like lysozyme	NA|534aa|up_7|NC_005126.1_2008438_2010040_-	TIGR01646, conserved_hypothetical_protein, Rhs element Vgr protein	NA|228aa|up_6|NC_005126.1_2010036_2010720_-	NA	NA|60aa|up_5|NC_005126.1_2010706_2010886_-	NA	NA|153aa|up_4|NC_005126.1_2010882_2011341_-	pfam06841, Phage_T4_gp19, T4-like virus tail tube protein gp19	NA|392aa|up_3|NC_005126.1_2011376_2012552_-	COG3497, COG3497, Phage tail sheath protein FI [General function prediction only]	NA|462aa|up_2|NC_005126.1_2012607_2013993_-	COG3497, COG3497, Phage tail sheath protein FI [General function prediction only]	NA|361aa|up_1|NC_005126.1_2014004_2015087_-	COG3497, COG3497, Phage tail sheath protein FI [General function prediction only]	NA|150aa|up_0|NC_005126.1_2015262_2015712_-	TIGR02241, hypothetical_protein_SCD8A	NA|316aa|down_0|NC_005126.1_2016642_2017590_-	NA	NA|301aa|down_1|NC_005126.1_2018791_2019694_-	pfam14065, DUF4255, Protein of unknown function (DUF4255)	NA|689aa|down_2|NC_005126.1_2019718_2021785_-	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones]	NA|521aa|down_3|NC_005126.1_2021794_2023357_-	NA	NA|342aa|down_4|NC_005126.1_2023535_2024561_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|317aa|down_5|NC_005126.1_2024610_2025561_-	NA	NA|969aa|down_6|NC_005126.1_2025762_2028669_-	NA	NA|901aa|down_7|NC_005126.1_2028665_2031368_-	NA	NA|139aa|down_8|NC_005126.1_2031464_2031881_-	NA	NA|164aa|down_9|NC_005126.1_2031877_2032369_-	pfam04965, GPW_gp25, Gene 25-like lysozyme
GCF_000196155.1_ASM19615v1	NC_005126	Photorhabdus laumondii subsp. laumondii TTO1, complete genome	3	2126977-2128442	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3-cas2,cas8f,cas5f,cas7f,cas6f	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	Type I-F	GTGCACTGCCGTACAGGCAGCTTAGAAA,GTGCACTGCCGTACAGGCAGCTTAGAAA,GTGCACTGCCGTACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	24,24,24	24	TypeI-F	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	NA,NA|80aa|down_3|NC_005126.1_2129980_2130220_+,NA|180aa|down_5|NC_005126.1_2132246_2132786_+	NA|173aa|up_9|NC_005126.1_2114649_2115168_-	PRK05174, PRK05174, bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA|577aa|up_8|NC_005126.1_2115251_2116982_-	COG1067, LonB, Predicted ATP-dependent protease [Posttranslational modification, protein turnover, chaperones]	NA|152aa|up_7|NC_005126.1_2117188_2117644_+	PRK05097, PRK05097, macrodomain Ter protein MatP	NA|369aa|up_6|NC_005126.1_2117793_2118900_-	PRK10808, PRK10808, outer membrane protein A; Reviewed	NA|178aa|up_5|NC_005126.1_2119584_2120118_-	PRK10595, PRK10595, cell division inhibitor SulA	NA|201aa|up_4|NC_005126.1_2120366_2120969_+	pfam04993, TfoX_N, TfoX N-terminal domain	NA|714aa|up_3|NC_005126.1_2121028_2123170_-	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein	NA|685aa|up_2|NC_005126.1_2123380_2125435_+	PRK11054, helD, DNA helicase IV; Provisional	NA|153aa|up_1|NC_005126.1_2125557_2126016_-	PRK05234, mgsA, methylglyoxal synthase; Validated	NA|138aa|up_0|NC_005126.1_2126138_2126552_+	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|107aa|down_0|NC_005126.1_2128482_2128803_-	PRK14129, PRK14129, heat shock protein HspQ; Provisional	NA|93aa|down_1|NC_005126.1_2129026_2129305_+	PRK14426, PRK14426, acylphosphatase; Provisional	NA|110aa|down_2|NC_005126.1_2129318_2129648_-	TIGR03342, dsrC_tusE_dsvC, sulfur relay protein, TusE/DsrC/DsvC family	NA|80aa|down_3|NC_005126.1_2129980_2130220_+	NA	NA|342aa|down_4|NC_005126.1_2131017_2132043_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|180aa|down_5|NC_005126.1_2132246_2132786_+	NA	cas3-cas2|1094aa|down_6|NC_005126.1_2133687_2136969_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	NA|87aa|down_7|NC_005126.1_2137062_2137323_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	cas8f|453aa|down_8|NC_005126.1_2138002_2139361_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|323aa|down_9|NC_005126.1_2139357_2140326_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)
GCF_000196155.1_ASM19615v1	NC_005126	Photorhabdus laumondii subsp. laumondii TTO1, complete genome	4	2133398-2133556	2	PILER-CR	no	cas3-cas2,cas8f,cas5f,cas7f,cas6f	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	Type I-F	TAATATGAATAAGTGCACTGCCGTACAGGCAGCTTAGAAAAA	42	0	0	NA	NA	I-F	2	2	TypeI-F	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	NA|80aa|up_2|NC_005126.1_2129980_2130220_+,NA|180aa|up_0|NC_005126.1_2132246_2132786_+,NA	NA|714aa|up_9|NC_005126.1_2121028_2123170_-	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein	NA|685aa|up_8|NC_005126.1_2123380_2125435_+	PRK11054, helD, DNA helicase IV; Provisional	NA|153aa|up_7|NC_005126.1_2125557_2126016_-	PRK05234, mgsA, methylglyoxal synthase; Validated	NA|138aa|up_6|NC_005126.1_2126138_2126552_+	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|107aa|up_5|NC_005126.1_2128482_2128803_-	PRK14129, PRK14129, heat shock protein HspQ; Provisional	NA|93aa|up_4|NC_005126.1_2129026_2129305_+	PRK14426, PRK14426, acylphosphatase; Provisional	NA|110aa|up_3|NC_005126.1_2129318_2129648_-	TIGR03342, dsrC_tusE_dsvC, sulfur relay protein, TusE/DsrC/DsvC family	NA|80aa|up_2|NC_005126.1_2129980_2130220_+	NA	NA|342aa|up_1|NC_005126.1_2131017_2132043_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|180aa|up_0|NC_005126.1_2132246_2132786_+	NA	cas3-cas2|1094aa|down_0|NC_005126.1_2133687_2136969_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	NA|87aa|down_1|NC_005126.1_2137062_2137323_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	cas8f|453aa|down_2|NC_005126.1_2138002_2139361_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|323aa|down_3|NC_005126.1_2139357_2140326_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|338aa|down_4|NC_005126.1_2140349_2141363_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|down_5|NC_005126.1_2141372_2141927_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|276aa|down_6|NC_005126.1_2143511_2144339_-	COG3718, IolB, Uncharacterized enzyme involved in inositol metabolism [Carbohydrate transport and metabolism]	NA|297aa|down_7|NC_005126.1_2144386_2145277_-	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase	NA|635aa|down_8|NC_005126.1_2145306_2147211_-	pfam09863, DUF2090, Uncharacterized protein conserved in bacteria (DUF2090)	NA|378aa|down_9|NC_005126.1_2147286_2148420_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]
GCF_000196155.1_ASM19615v1	NC_005126	Photorhabdus laumondii subsp. laumondii TTO1, complete genome	5	2142057-2143464	3,4,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3-cas2,cas8f,cas5f,cas7f,cas6f	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	Type I-F	GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA	28,28,28	1	1	2142685-2142716	NC_005126.1_3447011-3446980	I-F:I-F:I-F	22,23,23	23	TypeI-F	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	NA|80aa|up_8|NC_005126.1_2129980_2130220_+,NA|180aa|up_6|NC_005126.1_2132246_2132786_+,NA|120aa|down_9|NC_005126.1_2156933_2157293_+	NA|110aa|up_9|NC_005126.1_2129318_2129648_-	TIGR03342, dsrC_tusE_dsvC, sulfur relay protein, TusE/DsrC/DsvC family	NA|80aa|up_8|NC_005126.1_2129980_2130220_+	NA	NA|342aa|up_7|NC_005126.1_2131017_2132043_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|180aa|up_6|NC_005126.1_2132246_2132786_+	NA	cas3-cas2|1094aa|up_5|NC_005126.1_2133687_2136969_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	NA|87aa|up_4|NC_005126.1_2137062_2137323_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	cas8f|453aa|up_3|NC_005126.1_2138002_2139361_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|323aa|up_2|NC_005126.1_2139357_2140326_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|338aa|up_1|NC_005126.1_2140349_2141363_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|up_0|NC_005126.1_2141372_2141927_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|276aa|down_0|NC_005126.1_2143511_2144339_-	COG3718, IolB, Uncharacterized enzyme involved in inositol metabolism [Carbohydrate transport and metabolism]	NA|297aa|down_1|NC_005126.1_2144386_2145277_-	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase	NA|635aa|down_2|NC_005126.1_2145306_2147211_-	pfam09863, DUF2090, Uncharacterized protein conserved in bacteria (DUF2090)	NA|378aa|down_3|NC_005126.1_2147286_2148420_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|568aa|down_4|NC_005126.1_2148954_2150658_-	PRK10484, PRK10484, putative transporter; Provisional	NA|329aa|down_5|NC_005126.1_2150773_2151760_-	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase	NA|650aa|down_6|NC_005126.1_2152125_2154075_-	TIGR04377, 3D-35/4-trihydroxycyclohexane-12-dione_hydrolase, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase	NA|504aa|down_7|NC_005126.1_2154076_2155588_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|278aa|down_8|NC_005126.1_2155891_2156725_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|120aa|down_9|NC_005126.1_2156933_2157293_+	NA
GCF_000196155.1_ASM19615v1	NC_005126	Photorhabdus laumondii subsp. laumondii TTO1, complete genome	6	2392119-2392269	4,5	PILER-CR,CRISPRCasFinder	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	GTGCACTGCCGTACAGGCAGCTTAGAAAACC,GTGCACTGCCGTACAGGCAGCTTAGAAAA	31,29	0	0	NA	NA	I-F:I-F	2,2	2	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	NA,NA|113aa|down_7|NC_005126.1_2401212_2401551_+	NA|227aa|up_9|NC_005126.1_2380504_2381185_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|227aa|up_8|NC_005126.1_2381345_2382026_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|227aa|up_7|NC_005126.1_2382052_2382733_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|226aa|up_6|NC_005126.1_2382893_2383571_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|231aa|up_5|NC_005126.1_2383626_2384319_-	pfam08448, PAS_4, PAS fold	NA|223aa|up_4|NC_005126.1_2385749_2386418_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|225aa|up_3|NC_005126.1_2387124_2387799_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|303aa|up_2|NC_005126.1_2388848_2389757_-	TIGR04437, lipopolysaccharide_core_biosynthesis_protein, Kdo-III transferase WaaZ	NA|192aa|up_1|NC_005126.1_2389792_2390368_-	cd03354, LbH_SAT, Serine acetyltransferase (SAT): SAT catalyzes the CoA-dependent acetylation of the side chain hydroxyl group of L-serine to form O-acetylserine, as the first step of a two-step biosynthetic pathway in bacteria and plants leading to the formation of L-cysteine	NA|306aa|up_0|NC_005126.1_2390995_2391913_+	pfam07484, Collar, Phage Tail Collar Domain	NA|209aa|down_0|NC_005126.1_2393561_2394188_+	pfam02413, Caudo_TAP, Caudovirales tail fibre assembly protein, lambda gpK	NA|250aa|down_1|NC_005126.1_2394242_2394992_+	pfam07484, Collar, Phage Tail Collar Domain	NA|183aa|down_2|NC_005126.1_2396417_2396966_-	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|611aa|down_3|NC_005126.1_2397023_2398856_-	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|222aa|down_4|NC_005126.1_2398839_2399505_-	PRK09483, PRK09483, response regulator; Provisional	NA|75aa|down_5|NC_005126.1_2399939_2400164_+	pfam10769, DUF2594, Protein of unknown function (DUF2594)	NA|143aa|down_6|NC_005126.1_2400523_2400952_+	PRK15456, PRK15456, universal stress protein UspG; Provisional	NA|113aa|down_7|NC_005126.1_2401212_2401551_+	NA	NA|146aa|down_8|NC_005126.1_2401729_2402167_+	PRK15005, PRK15005, universal stress protein UspF	NA|232aa|down_9|NC_005126.1_2402658_2403354_+	PRK05420, PRK05420, aquaporin Z; Provisional
GCF_000196155.1_ASM19615v1	NC_005126	Photorhabdus laumondii subsp. laumondii TTO1, complete genome	7	2395199-2395826	5,6,3	PILER-CR,CRISPRCasFinder,CRT	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	GTGCACTGCCGTACAGGCAGCTTAGAAA,GTGCACTGCCGTACAGGCAGCTTAGAAA,GTGCACTGCCGTACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	6,10,10	10	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	NA,NA|113aa|down_5|NC_005126.1_2401212_2401551_+	NA|227aa|up_9|NC_005126.1_2382052_2382733_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|226aa|up_8|NC_005126.1_2382893_2383571_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|231aa|up_7|NC_005126.1_2383626_2384319_-	pfam08448, PAS_4, PAS fold	NA|223aa|up_6|NC_005126.1_2385749_2386418_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|225aa|up_5|NC_005126.1_2387124_2387799_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|303aa|up_4|NC_005126.1_2388848_2389757_-	TIGR04437, lipopolysaccharide_core_biosynthesis_protein, Kdo-III transferase WaaZ	NA|192aa|up_3|NC_005126.1_2389792_2390368_-	cd03354, LbH_SAT, Serine acetyltransferase (SAT): SAT catalyzes the CoA-dependent acetylation of the side chain hydroxyl group of L-serine to form O-acetylserine, as the first step of a two-step biosynthetic pathway in bacteria and plants leading to the formation of L-cysteine	NA|306aa|up_2|NC_005126.1_2390995_2391913_+	pfam07484, Collar, Phage Tail Collar Domain	NA|209aa|up_1|NC_005126.1_2393561_2394188_+	pfam02413, Caudo_TAP, Caudovirales tail fibre assembly protein, lambda gpK	NA|250aa|up_0|NC_005126.1_2394242_2394992_+	pfam07484, Collar, Phage Tail Collar Domain	NA|183aa|down_0|NC_005126.1_2396417_2396966_-	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|611aa|down_1|NC_005126.1_2397023_2398856_-	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|222aa|down_2|NC_005126.1_2398839_2399505_-	PRK09483, PRK09483, response regulator; Provisional	NA|75aa|down_3|NC_005126.1_2399939_2400164_+	pfam10769, DUF2594, Protein of unknown function (DUF2594)	NA|143aa|down_4|NC_005126.1_2400523_2400952_+	PRK15456, PRK15456, universal stress protein UspG; Provisional	NA|113aa|down_5|NC_005126.1_2401212_2401551_+	NA	NA|146aa|down_6|NC_005126.1_2401729_2402167_+	PRK15005, PRK15005, universal stress protein UspF	NA|232aa|down_7|NC_005126.1_2402658_2403354_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|240aa|down_8|NC_005126.1_2403736_2404456_+	pfam07484, Collar, Phage Tail Collar Domain	NA|209aa|down_9|NC_005126.1_2404477_2405104_+	pfam02413, Caudo_TAP, Caudovirales tail fibre assembly protein, lambda gpK
GCF_000196155.1_ASM19615v1	NC_005126	Photorhabdus laumondii subsp. laumondii TTO1, complete genome	8	2475403-2475730	6,7,4	PILER-CR,CRISPRCasFinder,CRT	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	5,5,5	5	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	NA|194aa|up_6|NC_005126.1_2469075_2469657_+,NA|112aa|down_8|NC_005126.1_2485601_2485937_-	NA|360aa|up_9|NC_005126.1_2465661_2466741_+	cd01096, Alkanal_monooxygenase, Alkanal monooxygenase are flavin monoxygenases	NA|325aa|up_8|NC_005126.1_2466758_2467733_+	cd01096, Alkanal_monooxygenase, Alkanal monooxygenase are flavin monoxygenases	NA|371aa|up_7|NC_005126.1_2467794_2468907_+	pfam04443, LuxE, Acyl-protein synthetase, LuxE	NA|194aa|up_6|NC_005126.1_2469075_2469657_+	NA	NA|101aa|up_5|NC_005126.1_2469817_2470120_-	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family	NA|314aa|up_4|NC_005126.1_2470851_2471793_+	cd12164, GDH_like_2, Putative glycerate dehydrogenase and related proteins of the D-specific 2-hydroxy dehydrogenase family	NA|180aa|up_3|NC_005126.1_2471865_2472405_+	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only]	NA|188aa|up_2|NC_005126.1_2472595_2473159_-	PRK10598, PRK10598, lipoprotein; Provisional	NA|402aa|up_1|NC_005126.1_2473196_2474402_-	PRK11646, PRK11646, multidrug efflux MFS transporter MdtH	NA|195aa|up_0|NC_005126.1_2474590_2475175_+	PRK10809, PRK10809, 30S ribosomal protein S5 alanine N-acetyltransferase	NA|512aa|down_0|NC_005126.1_2476571_2478107_+	COG0728, MviN, Uncharacterized membrane protein, putative virulence factor [General function prediction only]	NA|577aa|down_1|NC_005126.1_2478471_2480202_-	COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	NA|246aa|down_2|NC_005126.1_2480556_2481294_-	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|185aa|down_3|NC_005126.1_2481897_2482452_+	COG3038, CybB, Cytochrome B561 [Energy production and conversion]	NA|193aa|down_4|NC_005126.1_2482478_2483057_+	PRK03757, PRK03757, YceI family protein	NA|123aa|down_5|NC_005126.1_2483370_2483739_-	pfam07828, PA-IL, PA-IL-like protein	NA|188aa|down_6|NC_005126.1_2484707_2485271_+	PRK11700, PRK11700, VOC family protein	NA|105aa|down_7|NC_005126.1_2485286_2485601_-	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|112aa|down_8|NC_005126.1_2485601_2485937_-	NA	NA|249aa|down_9|NC_005126.1_2486287_2487034_+	PRK11572, PRK11572, copper homeostasis protein CutC; Provisional
GCF_000196155.1_ASM19615v1	NC_005126	Photorhabdus laumondii subsp. laumondii TTO1, complete genome	9	3051737-3051859	8	CRISPRCasFinder	no	DEDDh	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	Unclear	CTCCCTTGCCGTCGCGATGCATCTTGAAATCCATAGGGTATA	42	0	0	NA	NA	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	NA,NA	NA|157aa|up_9|NC_005126.1_3042480_3042951_+	COG3133, SlyB, Outer membrane lipoprotein [Cell envelope biogenesis, outer membrane]	NA|144aa|up_8|NC_005126.1_3043035_3043467_-	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional	NA|80aa|up_7|NC_005126.1_3044027_3044267_-	COG3313, COG3313, Predicted Fe-S protein [General function prediction only]	NA|138aa|up_6|NC_005126.1_3044439_3044853_+	TIGR00068, Lactoylglutathione_lyase, lactoylglutathione lyase	DEDDh|218aa|up_5|NC_005126.1_3044852_3045506_+	PRK05168, PRK05168, ribonuclease T; Provisional	NA|117aa|up_4|NC_005126.1_3045732_3046083_-	PRK10824, PRK10824, Grx4 family monothiol glutaredoxin	NA|342aa|up_3|NC_005126.1_3046665_3047691_+	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|303aa|up_2|NC_005126.1_3047697_3048606_-	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|399aa|up_1|NC_005126.1_3048877_3050074_+	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|384aa|up_0|NC_005126.1_3050494_3051646_+	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|326aa|down_0|NC_005126.1_3051949_3052927_-	COG2309, AmpS, Leucyl aminopeptidase (aminopeptidase T) [Amino acid transport and metabolism]	NA|226aa|down_1|NC_005126.1_3053333_3054011_-	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|458aa|down_2|NC_005126.1_3054237_3055611_+	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|470aa|down_3|NC_005126.1_3056559_3057969_+	PRK09206, PRK09206, pyruvate kinase PykF	NA|284aa|down_4|NC_005126.1_3058221_3059073_-	PRK06142, PRK06142, crotonase/enoyl-CoA hydratase family protein	NA|79aa|down_5|NC_005126.1_3059514_3059751_+	PRK15396, PRK15396, major outer membrane lipoprotein	NA|361aa|down_6|NC_005126.1_3059861_3060944_-	PRK10190, PRK10190, L,D-transpeptidase; Provisional	NA|139aa|down_7|NC_005126.1_3061065_3061482_-	PRK09296, PRK09296, cysteine desulfuration protein SufE	NA|413aa|down_8|NC_005126.1_3061519_3062758_-	PRK09295, PRK09295, cysteine desulfurase SufS	NA|439aa|down_9|NC_005126.1_3062754_3064071_-	PRK10948, PRK10948, Fe-S cluster assembly protein SufD
GCF_000196155.1_ASM19615v1	NC_005126	Photorhabdus laumondii subsp. laumondii TTO1, complete genome	10	3956599-3956691	9	CRISPRCasFinder	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	CTCACCCCGGTCACATAGTTATCTAT	26	1	137	3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665|3956625-3956665	NC_005126.1_117535-117495|NC_005126.1_1040819-1040779|NC_005126.1_2864439-2864399|NC_005126.1_3964127-3964087|NC_005126.1_4111176-4111136|NC_005126.1_4409097-4409057|NC_005126.1_4592841-4592801|NC_005126.1_4667916-4667876|NC_005126.1_4890740-4890700|NC_005126.1_434451-434491|NC_005126.1_1766771-1766811|NC_005126.1_1883700-1883740|NC_005126.1_1919249-1919289|NC_005126.1_1996136-1996176|NC_005126.1_3311318-3311358|NC_005126.1_3552381-3552421|NC_005126.1_3737115-3737155|NC_005126.1_4389155-4389195|NC_005126.1_4585642-4585682|NC_005126.1_5663564-5663604|NC_005126.1_159628-159588|NC_005126.1_221280-221240|NC_005126.1_1057711-1057671|NC_005126.1_1643963-1643923|NC_005126.1_2161580-2161540|NC_005126.1_2206515-2206475|NC_005126.1_2250983-2250943|NC_005126.1_2476496-2476456|NC_005126.1_2528439-2528399|NC_005126.1_3018287-3018247|NC_005126.1_3258999-3258959|NC_005126.1_3309488-3309448|NC_005126.1_3507150-3507110|NC_005126.1_3745725-3745685|NC_005126.1_4191590-4191550|NC_005126.1_4593972-4593932|NC_005126.1_5081168-5081128|NC_005126.1_5239922-5239882|NC_005126.1_5394806-5394766|NC_005126.1_5465908-5465868|NC_005126.1_5662142-5662102|NC_005126.1_209645-209685|NC_005126.1_218129-218169|NC_005126.1_513339-513379|NC_005126.1_1830827-1830867|NC_005126.1_1912916-1912956|NC_005126.1_2385521-2385561|NC_005126.1_2544380-2544420|NC_005126.1_2544964-2545004|NC_005126.1_2604416-2604456|NC_005126.1_3045589-3045629|NC_005126.1_3193046-3193086|NC_005126.1_3692470-3692510|NC_005126.1_3805253-3805293|NC_005126.1_3893566-3893606|NC_005126.1_3976644-3976684|NC_005126.1_4257024-4257064|NC_005126.1_4906226-4906266|NC_005126.1_4957990-4958030|NC_005126.1_5255343-5255383|NC_005126.1_5329304-5329344|NC_005126.1_5337829-5337869|NC_005126.1_5665290-5665330|NC_005126.1_323753-323713|NC_005126.1_501101-501061|NC_005126.1_528114-528074|NC_005126.1_622866-622826|NC_005126.1_829895-829855|NC_005126.1_1049239-1049199|NC_005126.1_1154525-1154485|NC_005126.1_1804211-1804171|NC_005126.1_1937006-1936966|NC_005126.1_2123299-2123259|NC_005126.1_2163462-2163422|NC_005126.1_2206638-2206598|NC_005126.1_2342984-2342944|NC_005126.1_2362246-2362206|NC_005126.1_2401082-2401042|NC_005126.1_2430539-2430499|NC_005126.1_2548617-2548577|NC_005126.1_2576105-2576065|NC_005126.1_2955584-2955544|NC_005126.1_3074756-3074716|NC_005126.1_3189901-3189861|NC_005126.1_3663896-3663856|NC_005126.1_3955171-3955131|NC_005126.1_4004178-4004138|NC_005126.1_4177584-4177544|NC_005126.1_4403552-4403512|NC_005126.1_4423699-4423659|NC_005126.1_4762845-4762805|NC_005126.1_5065787-5065747|NC_005126.1_5104163-5104123|NC_005126.1_5128028-5127988|NC_005126.1_5618660-5618620|NC_005126.1_5641929-5641889|NC_005126.1_92426-92466|NC_005126.1_268766-268806|NC_005126.1_535579-535619|NC_005126.1_620840-620880|NC_005126.1_628810-628850|NC_005126.1_711165-711205|NC_005126.1_868344-868384|NC_005126.1_948661-948701|NC_005126.1_1086595-1086635|NC_005126.1_1428388-1428428|NC_005126.1_1691127-1691167|NC_005126.1_1812736-1812776|NC_005126.1_1831166-1831206|NC_005126.1_1879244-1879284|NC_005126.1_2015735-2015775|NC_005126.1_2119122-2119162|NC_005126.1_2338768-2338808|NC_005126.1_2355770-2355810|NC_005126.1_2390452-2390492|NC_005126.1_2420013-2420053|NC_005126.1_2778720-2778760|NC_005126.1_3088627-3088667|NC_005126.1_3233873-3233913|NC_005126.1_3233998-3234038|NC_005126.1_3307502-3307542|NC_005126.1_3484100-3484140|NC_005126.1_3720908-3720948|NC_005126.1_3741083-3741123|NC_005126.1_3906924-3906964|NC_005126.1_4107997-4108037|NC_005126.1_4243210-4243250|NC_005126.1_4453695-4453735|NC_005126.1_4497909-4497949|NC_005126.1_4684310-4684350|NC_005126.1_4722082-4722122|NC_005126.1_5111433-5111473|NC_005126.1_5139056-5139096|NC_005126.1_5191635-5191675|NC_005126.1_5284482-5284522|NC_005126.1_5322845-5322885|NC_005126.1_5519158-5519198	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	NA|116aa|up_7|NC_005126.1_3931519_3931867_+,NA|240aa|down_0|NC_005126.1_3957163_3957883_+,NA|240aa|down_5|NC_005126.1_3962808_3963528_+	NA|480aa|up_9|NC_005126.1_3929045_3930485_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|91aa|up_8|NC_005126.1_3931260_3931533_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|116aa|up_7|NC_005126.1_3931519_3931867_+	NA	NA|1296aa|up_6|NC_005126.1_3931983_3935871_-	PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional	NA|472aa|up_5|NC_005126.1_3936137_3937553_+	PRK10859, PRK10859, membrane-bound lytic murein transglycosylase MltF	NA|769aa|up_4|NC_005126.1_3937683_3939990_+	PRK15029, PRK15029, arginine decarboxylase; Provisional	NA|174aa|up_3|NC_005126.1_3939978_3940500_-	PRK10860, PRK10860, tRNA-specific adenosine deaminase; Provisional	NA|3532aa|up_2|NC_005126.1_3942669_3953265_-	NF012221, MARTX_Nterm, MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin RtxA	NA|167aa|up_1|NC_005126.1_3955227_3955728_+	pfam07484, Collar, Phage Tail Collar Domain	NA|200aa|up_0|NC_005126.1_3955724_3956324_+	pfam02413, Caudo_TAP, Caudovirales tail fibre assembly protein, lambda gpK	NA|240aa|down_0|NC_005126.1_3957163_3957883_+	NA	NA|276aa|down_1|NC_005126.1_3959756_3960584_+	pfam03406, Phage_fiber_2, Phage tail fibre repeat	NA|40aa|down_2|NC_005126.1_3960623_3960743_+	pfam02413, Caudo_TAP, Caudovirales tail fibre assembly protein, lambda gpK	NA|276aa|down_3|NC_005126.1_3961156_3961984_+	pfam03406, Phage_fiber_2, Phage tail fibre repeat	NA|145aa|down_4|NC_005126.1_3961985_3962420_+	pfam02413, Caudo_TAP, Caudovirales tail fibre assembly protein, lambda gpK	NA|240aa|down_5|NC_005126.1_3962808_3963528_+	NA	NA|87aa|down_6|NC_005126.1_3964215_3964476_+	PRK07118, PRK07118, Fe-S cluster domain-containing protein	NA|127aa|down_7|NC_005126.1_3964478_3964859_-	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional	NA|244aa|down_8|NC_005126.1_3964858_3965590_-	PRK05265, PRK05265, pyridoxine 5'-phosphate synthase; Provisional	NA|242aa|down_9|NC_005126.1_3965784_3966510_-	PRK00085, recO, DNA repair protein RecO; Reviewed
GCF_000196155.1_ASM19615v1	NC_005126	Photorhabdus laumondii subsp. laumondii TTO1, complete genome	11	5065612-5065700	10	CRISPRCasFinder	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	GATTTCAAGATGCATCGCGACGGCAA	26	1	1	5065638-5065674	NC_005126.1_5158880-5158844	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	NA|161aa|up_7|NC_005126.1_5057198_5057681_-,NA|403aa|up_6|NC_005126.1_5057683_5058892_-,NA|86aa|up_5|NC_005126.1_5059324_5059582_-,NA|102aa|up_4|NC_005126.1_5059683_5059989_+,NA|110aa|up_0|NC_005126.1_5063488_5063818_+,NA|187aa|down_8|NC_005126.1_5076445_5077006_-	NA|291aa|up_9|NC_005126.1_5054140_5055013_-	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms]	NA|662aa|up_8|NC_005126.1_5055210_5057196_-	pfam12532, DUF3732, Protein of unknown function (DUF3732)	NA|161aa|up_7|NC_005126.1_5057198_5057681_-	NA	NA|403aa|up_6|NC_005126.1_5057683_5058892_-	NA	NA|86aa|up_5|NC_005126.1_5059324_5059582_-	NA	NA|102aa|up_4|NC_005126.1_5059683_5059989_+	NA	NA|48aa|up_3|NC_005126.1_5060024_5060168_+	PRK00357, rpsS, 30S ribosomal protein S19; Reviewed	NA|370aa|up_2|NC_005126.1_5060496_5061606_+	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases	NA|283aa|up_1|NC_005126.1_5061728_5062577_+	TIGR02821, S-formylglutathione_hydrolase, S-formylglutathione hydrolase	NA|110aa|up_0|NC_005126.1_5063488_5063818_+	NA	NA|301aa|down_0|NC_005126.1_5065884_5066787_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|141aa|down_1|NC_005126.1_5066809_5067232_+	PRK05437, PRK05437, isopentenyl pyrophosphate isomerase; Provisional	NA|295aa|down_2|NC_005126.1_5067244_5068129_-	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|197aa|down_3|NC_005126.1_5068246_5068837_+	cd02811, IDI-2_FMN, Isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 (IDI-2) FMN-binding domain	NA|392aa|down_4|NC_005126.1_5068950_5070126_+	TIGR01789, lycopene_cyclase, lycopene cyclase	NA|494aa|down_5|NC_005126.1_5070118_5071600_+	TIGR02734, Phytoene_desaturase_lycopene-forming, phytoene desaturase	NA|309aa|down_6|NC_005126.1_5071596_5072523_+	cd00683, Trans_IPPS_HH, Trans-Isoprenyl Diphosphate Synthases, head-to-head	NA|1053aa|down_7|NC_005126.1_5073286_5076445_-	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|187aa|down_8|NC_005126.1_5076445_5077006_-	NA	NA|442aa|down_9|NC_005126.1_5076995_5078321_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain
GCF_000196155.1_ASM19615v1	NC_005126	Photorhabdus laumondii subsp. laumondii TTO1, complete genome	12	5115428-5115511	11	CRISPRCasFinder	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	GATTTCAAGATGCATCGCGACGGCAA	26	0	0	NA	NA	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	NA,NA|94aa|down_0|NC_005126.1_5115589_5115871_+,NA|299aa|down_8|NC_005126.1_5125076_5125973_-	NA|397aa|up_9|NC_005126.1_5102652_5103843_+	cd04737, LOX_like_FMN, L-Lactate oxidase (LOX) FMN-binding domain	NA|382aa|up_8|NC_005126.1_5104170_5105316_-	PRK11380, PRK11380, hypothetical protein; Provisional	NA|171aa|up_7|NC_005126.1_5105532_5106045_+	PRK11639, PRK11639, zinc uptake transcriptional repressor Zur	NA|202aa|up_6|NC_005126.1_5106204_5106810_-	PRK00215, PRK00215, transcriptional repressor LexA	NA|124aa|up_5|NC_005126.1_5106929_5107301_-	cd14264, DAGK_IM, Integral membrane diacylglycerol kinase	NA|819aa|up_4|NC_005126.1_5107430_5109887_+	PRK04974, PRK04974, glycerol-3-phosphate 1-O-acyltransferase PlsB	NA|285aa|up_3|NC_005126.1_5109930_5110785_-	PRK12848, ubiA, 4-hydroxybenzoate octaprenyltransferase	NA|169aa|up_2|NC_005126.1_5110819_5111326_-	PRK11655, ubiC, chorismate pyruvate lyase; Provisional	NA|549aa|up_1|NC_005126.1_5111639_5113286_-	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|460aa|up_0|NC_005126.1_5113584_5114964_+	PRK09084, PRK09084, aspartate kinase III; Validated	NA|94aa|down_0|NC_005126.1_5115589_5115871_+	NA	NA|75aa|down_1|NC_005126.1_5115941_5116166_+	PRK05087, PRK05087, D-alanine--poly(phosphoribitol) ligase subunit DltC	NA|401aa|down_2|NC_005126.1_5116162_5117365_+	pfam04914, DltD, DltD protein	NA|375aa|down_3|NC_005126.1_5117508_5118633_+	TIGR04091, hypothetical_protein, D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA|488aa|down_4|NC_005126.1_5118629_5120093_+	cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) and similar proteins	NA|346aa|down_5|NC_005126.1_5120300_5121338_-	pfam09924, DUF2156, Uncharacterized conserved protein (DUF2156)	NA|856aa|down_6|NC_005126.1_5121321_5123889_-	cd00610, OAT_like, Acetyl ornithine aminotransferase family	NA|349aa|down_7|NC_005126.1_5123981_5125028_-	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|299aa|down_8|NC_005126.1_5125076_5125973_-	NA	NA|128aa|down_9|NC_005126.1_5126020_5126404_-	pfam14079, DUF4260, Domain of unknown function (DUF4260)
GCF_000196155.1_ASM19615v1	NC_005126	Photorhabdus laumondii subsp. laumondii TTO1, complete genome	13	5394653-5394742	12	CRISPRCasFinder	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	CGACGGCAAGGGAGCGAATCCCCGGGAGCATA	32	1	3	5394685-5394710|5394685-5394710|5394685-5394710	NC_005126.1_711286-711261|NC_005126.1_2355891-2355866|NC_005126.1_5127907-5127932	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	NA,NA|50aa|down_6|NC_005126.1_5402400_5402550_+	NA|267aa|up_9|NC_005126.1_5381422_5382223_-	PRK10976, PRK10976, putative hydrolase; Provisional	NA|333aa|up_8|NC_005126.1_5382245_5383244_-	PRK10749, PRK10749, lysophospholipase L2; Provisional	NA|609aa|up_7|NC_005126.1_5383258_5385085_-	PRK11057, PRK11057, ATP-dependent DNA helicase RecQ; Provisional	NA|608aa|up_6|NC_005126.1_5385533_5387357_+	COG4264, RhbC, Siderophore synthetase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|718aa|up_5|NC_005126.1_5387497_5389651_+	COG4773, FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]	NA|339aa|up_4|NC_005126.1_5389719_5390736_+	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|338aa|up_3|NC_005126.1_5390732_5391746_+	pfam01032, FecCD, FecCD transport family	NA|353aa|up_2|NC_005126.1_5391732_5392791_+	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism]	NA|271aa|up_1|NC_005126.1_5392775_5393588_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|259aa|up_0|NC_005126.1_5393765_5394542_+	PRK10647, PRK10647, ferric iron reductase involved in ferric hydroximate transport; Provisional	NA|515aa|down_0|NC_005126.1_5394900_5396445_+	cd06450, DOPA_deC_like, DOPA decarboxylase family	NA|434aa|down_1|NC_005126.1_5396475_5397777_+	COG3486, IucD, Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|806aa|down_2|NC_005126.1_5397776_5400194_+	COG4264, RhbC, Siderophore synthetase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|157aa|down_3|NC_005126.1_5400489_5400960_+	PRK11688, PRK11688, thioesterase family protein	NA|297aa|down_4|NC_005126.1_5401071_5401962_+	PRK15430, PRK15430, EamA family transporter RarD	NA|127aa|down_5|NC_005126.1_5401969_5402350_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|50aa|down_6|NC_005126.1_5402400_5402550_+	NA	NA|317aa|down_7|NC_005126.1_5403115_5404066_-	PRK11085, PRK11085, magnesium/cobalt transporter CorA	NA|724aa|down_8|NC_005126.1_5404161_5406333_-	PRK11773, uvrD, DNA-dependent helicase II; Provisional	NA|239aa|down_9|NC_005126.1_5406390_5407107_-	PRK10748, PRK10748, 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB
GCF_000196155.1_ASM19615v1	NC_005126	Photorhabdus laumondii subsp. laumondii TTO1, complete genome	14	5613713-5613803	13	CRISPRCasFinder	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	GCAACTTGAAAGATGACGGGTATA	24	1	85	5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779|5613737-5613779	NC_005126.1_434514-434472|NC_005126.1_620903-620861|NC_005126.1_1086658-1086616|NC_005126.1_1883763-1883721|NC_005126.1_1919312-1919270|NC_005126.1_3464854-3464812|NC_005126.1_3741146-3741104|NC_005126.1_3954265-3954223|NC_005126.1_117472-117514|NC_005126.1_663865-663907|NC_005126.1_1057648-1057690|NC_005126.1_3955108-3955150|NC_005126.1_4409034-4409076|NC_005126.1_4592778-4592820|NC_005126.1_4593909-4593951|NC_005126.1_5115602-5115644|NC_005126.1_5127965-5128007|NC_005126.1_5618597-5618639|NC_005126.1_5641866-5641908|NC_005126.1_443676-443634|NC_005126.1_513402-513360|NC_005126.1_581940-581898|NC_005126.1_641803-641761|NC_005126.1_643372-643330|NC_005126.1_664934-664892|NC_005126.1_1163078-1163036|NC_005126.1_1759342-1759300|NC_005126.1_1766834-1766792|NC_005126.1_1812674-1812632|NC_005126.1_1812799-1812757|NC_005126.1_1830665-1830623|NC_005126.1_1830890-1830848|NC_005126.1_1879307-1879265|NC_005126.1_1996199-1996157|NC_005126.1_2016513-2016471|NC_005126.1_2086362-2086320|NC_005126.1_2119185-2119143|NC_005126.1_2503025-2502983|NC_005126.1_2604604-2604562|NC_005126.1_2862591-2862549|NC_005126.1_3307565-3307523|NC_005126.1_3374418-3374376|NC_005126.1_3504345-3504303|NC_005126.1_3536865-3536823|NC_005126.1_3607547-3607505|NC_005126.1_3663089-3663047|NC_005126.1_3720971-3720929|NC_005126.1_4243273-4243231|NC_005126.1_4389218-4389176|NC_005126.1_4896890-4896848|NC_005126.1_5191698-5191656|NC_005126.1_5284545-5284503|NC_005126.1_5329367-5329325|NC_005126.1_5337892-5337850|NC_005126.1_5563255-5563213|NC_005126.1_159565-159607|NC_005126.1_501038-501080|NC_005126.1_835922-835964|NC_005126.1_839153-839195|NC_005126.1_1040756-1040798|NC_005126.1_1615246-1615288|NC_005126.1_1643900-1643942|NC_005126.1_1862515-1862557|NC_005126.1_1867671-1867713|NC_005126.1_2161517-2161559|NC_005126.1_2430476-2430518|NC_005126.1_2536964-2537006|NC_005126.1_2861226-2861268|NC_005126.1_3016793-3016835|NC_005126.1_3106430-3106472|NC_005126.1_3470621-3470663|NC_005126.1_3745439-3745481|NC_005126.1_3769993-3770035|NC_005126.1_3959670-3959712|NC_005126.1_3964064-3964106|NC_005126.1_4111113-4111155|NC_005126.1_4115156-4115198|NC_005126.1_4286567-4286609|NC_005126.1_4403489-4403531|NC_005126.1_4434168-4434210|NC_005126.1_4667853-4667895|NC_005126.1_4890677-4890719|NC_005126.1_5065724-5065766|NC_005126.1_5239859-5239901|NC_005126.1_5248679-5248721	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,DEDDh,PD-DExK,RT,DinG,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	NA,NA	NA|391aa|up_9|NC_005126.1_5604620_5605793_+	cd08369, FMT_core, Formyltransferase, catalytic core domain	NA|341aa|up_8|NC_005126.1_5605993_5607016_+	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs	NA|92aa|up_7|NC_005126.1_5607133_5607409_+	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	NA|233aa|up_6|NC_005126.1_5607628_5608327_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|163aa|up_5|NC_005126.1_5608525_5609014_+	PRK10358, PRK10358, tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL	NA|233aa|up_4|NC_005126.1_5609581_5610280_+	cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I;  AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)	NA|274aa|up_3|NC_005126.1_5610504_5611326_-	PRK11132, cysE, serine acetyltransferase; Provisional	NA|341aa|up_2|NC_005126.1_5611369_5612392_-	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA|159aa|up_1|NC_005126.1_5612391_5612868_-	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated	NA|146aa|up_0|NC_005126.1_5612937_5613375_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|436aa|down_0|NC_005126.1_5613923_5615231_+	PRK11637, PRK11637, AmiB activator; Provisional	NA|258aa|down_1|NC_005126.1_5615262_5616036_+	pfam04748, Polysacc_deac_2, Divergent polysaccharide deacetylase	NA|143aa|down_2|NC_005126.1_5616082_5616511_-	pfam01797, Y1_Tnp, Transposase IS200 like	NA|349aa|down_3|NC_005126.1_5617398_5618445_+	cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems	NA|342aa|down_4|NC_005126.1_5618733_5619759_-	PRK05396, tdh, L-threonine 3-dehydrogenase; Validated	NA|399aa|down_5|NC_005126.1_5619768_5620965_-	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional	NA|313aa|down_6|NC_005126.1_5621199_5622138_+	PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional	NA|350aa|down_7|NC_005126.1_5622148_5623198_+	PRK10916, PRK10916, ADP-heptose--LPS heptosyltransferase RfaF	NA|322aa|down_8|NC_005126.1_5623197_5624163_+	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC	NA|320aa|down_9|NC_005126.1_5624287_5625247_-	cd10935, CE4_WalW, Putative catalytic domain of lipopolysaccharide biosynthesis protein WalW and its bacterial homologs
