assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000196395.1_ASM19639v1	NC_009349	Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete sequence	1	2971-3101	1	PILER-CR	no			Orphan	CAAACAGGACATTTAAGTTGGAAACT	26	0	0	NA	NA	NA	2	2	Orphan	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	NA,NA|119aa|down_3|NC_009349.1_6747_7104_-,NA|100aa|down_4|NC_009349.1_7272_7572_-,NA|728aa|down_8|NC_009349.1_11645_13829_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|514aa|up_2|NC_009349.1_222_1764_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|252aa|up_1|NC_009349.1_1778_2534_+	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|106aa|up_0|NC_009349.1_2593_2911_-	pfam13935, Ead_Ea22, Ead/Ea22-like protein	NA|211aa|down_0|NC_009349.1_3395_4028_-	PRK13756, PRK13756, TetR family transcriptional regulator	NA|406aa|down_1|NC_009349.1_4108_5326_+	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters	NA|151aa|down_2|NC_009349.1_6161_6614_+	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family	NA|119aa|down_3|NC_009349.1_6747_7104_-	NA	NA|100aa|down_4|NC_009349.1_7272_7572_-	NA	NA|530aa|down_5|NC_009349.1_7626_9216_-	pfam15978, TnsD, Tn7-like transposition protein D	NA|229aa|down_6|NC_009349.1_9246_9933_-	pfam06527, TniQ, TniQ	NA|480aa|down_7|NC_009349.1_10203_11643_-	pfam13401, AAA_22, AAA domain	NA|728aa|down_8|NC_009349.1_11645_13829_-	NA	NA|291aa|down_9|NC_009349.1_13818_14691_-	pfam08722, Tn7_Tnp_TnsA_N, TnsA endonuclease N terminal
GCF_000196395.1_ASM19639v1	NC_009349	Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete sequence	2	134704-134815	1	CRISPRCasFinder	no			Orphan	TCCCGGTACTACCGGTGCAGCGTTGGTC	28	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	NA|135aa|up_9|NC_009349.1_127391_127796_-,NA|165aa|up_6|NC_009349.1_129095_129590_-,NA|203aa|up_5|NC_009349.1_129664_130273_-,NA|181aa|up_4|NC_009349.1_130282_130825_-,NA|67aa|up_2|NC_009349.1_131789_131990_-,NA|165aa|up_1|NC_009349.1_132117_132612_-,NA|176aa|down_1|NC_009349.1_138084_138612_+,NA|76aa|down_2|NC_009349.1_139489_139717_+,NA|172aa|down_3|NC_009349.1_139831_140347_+,NA|82aa|down_4|NC_009349.1_140395_140641_+	NA|135aa|up_9|NC_009349.1_127391_127796_-	NA	NA|75aa|up_8|NC_009349.1_127856_128081_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|295aa|up_7|NC_009349.1_128144_129029_-	pfam01555, N6_N4_Mtase, DNA methylase	NA|165aa|up_6|NC_009349.1_129095_129590_-	NA	NA|203aa|up_5|NC_009349.1_129664_130273_-	NA	NA|181aa|up_4|NC_009349.1_130282_130825_-	NA	NA|164aa|up_3|NC_009349.1_131165_131657_-	pfam11284, DUF3085, Protein of unknown function (DUF3085)	NA|67aa|up_2|NC_009349.1_131789_131990_-	NA	NA|165aa|up_1|NC_009349.1_132117_132612_-	NA	NA|599aa|up_0|NC_009349.1_132717_134514_-	cd01454, vWA_norD_type, norD type: Denitrifying bacteria contain both membrane bound and periplasmic nitrate reductases	NA|366aa|down_0|NC_009349.1_136896_137994_+	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	NA|176aa|down_1|NC_009349.1_138084_138612_+	NA	NA|76aa|down_2|NC_009349.1_139489_139717_+	NA	NA|172aa|down_3|NC_009349.1_139831_140347_+	NA	NA|82aa|down_4|NC_009349.1_140395_140641_+	NA	NA|94aa|down_5|NC_009349.1_141181_141463_+	pfam07178, TraL, TraL protein	NA|212aa|down_6|NC_009349.1_141459_142095_+	pfam05309, TraE, TraE protein	NA|440aa|down_7|NC_009349.1_142987_144307_+	cd16430, TraB, TraB is a homolog of VirB10 which forms part of core complex in Type IV secretion system (T4SS)	NA|189aa|down_8|NC_009349.1_144303_144870_+	pfam09676, TraV, Type IV conjugative transfer system lipoprotein (TraV)	NA|133aa|down_9|NC_009349.1_144888_145287_+	pfam04956, TrbC, TrbC/VIRB2 family
GCF_000196395.1_ASM19639v1	NC_009348	Aeromonas salmonicida subsp. salmonicida A449, complete sequence	1	1539-1625	1	CRISPRCasFinder	no	WYL	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	Unclear	TATTCCAACCTGATCCGAACCCT	23	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	NA,NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|368aa|down_0|NC_009348.1_1653_2757_+	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated	NA|368aa|down_1|NC_009348.1_2759_3863_+	PRK00064, recF, recombination protein F; Reviewed	NA|805aa|down_2|NC_009348.1_3859_6274_+	PRK14939, gyrB, DNA gyrase subunit B; Provisional	NA|255aa|down_3|NC_009348.1_6341_7106_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|127aa|down_4|NC_009348.1_7309_7690_-	cd07261, EhpR_like, phenazine resistance protein, EhpR	WYL|235aa|down_5|NC_009348.1_7757_8462_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|138aa|down_6|NC_009348.1_8740_9154_+	PRK10743, PRK10743, heat shock chaperone IbpA	NA|146aa|down_7|NC_009348.1_9247_9685_+	PRK10743, PRK10743, heat shock chaperone IbpA	NA|144aa|down_8|NC_009348.1_10880_11312_-	cd17019, T3SC_IA_ShcA-like, Class IA type III secretion system chaperone protein, similar to Pseudomonas syringae chaperone protein ShcA	NA|416aa|down_9|NC_009348.1_11424_12672_-	PRK09440, avtA, valine--pyruvate transaminase; Provisional
GCF_000196395.1_ASM19639v1	NC_009348	Aeromonas salmonicida subsp. salmonicida A449, complete sequence	2	196465-196563	2	CRISPRCasFinder	no		WYL,csa3,DinG,cas3,DEDDh,TnsE_C	Orphan	GCATAAAGATTGAACTATCGGTT	23	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	NA|176aa|up_4|NC_009348.1_191169_191697_-,NA	NA|362aa|up_9|NC_009348.1_185848_186934_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_8|NC_009348.1_187010_188165_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|302aa|up_7|NC_009348.1_188161_189067_+	PRK10683, PRK10683, putrescine transporter subunit: membrane component of ABC superfamily; Provisional	NA|281aa|up_6|NC_009348.1_189063_189906_+	PRK10592, PRK10592, putrescine transporter subunit: membrane component of ABC superfamily; Provisional	NA|235aa|up_5|NC_009348.1_189951_190656_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|176aa|up_4|NC_009348.1_191169_191697_-	NA	NA|155aa|up_3|NC_009348.1_191821_192286_-	PRK11688, PRK11688, thioesterase family protein	NA|608aa|up_2|NC_009348.1_192419_194243_+	PRK11057, PRK11057, ATP-dependent DNA helicase RecQ; Provisional	NA|101aa|up_1|NC_009348.1_194344_194647_-	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|476aa|up_0|NC_009348.1_194751_196179_+	PRK00029, PRK00029, YdiU family protein	NA|225aa|down_0|NC_009348.1_196647_197322_+	PRK11212, PRK11212, 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter	NA|162aa|down_1|NC_009348.1_197593_198079_-	PRK09372, PRK09372, ribonuclease E inhibitor RraA	NA|475aa|down_2|NC_009348.1_199375_200800_-	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	NA|469aa|down_3|NC_009348.1_200950_202357_-	PRK10637, cysG, siroheme synthase CysG	NA|271aa|down_4|NC_009348.1_202369_203182_-	PRK11562, PRK11562, nitrite transporter NirC; Provisional	NA|106aa|down_5|NC_009348.1_203233_203551_-	PRK09511, nirD, nitrite reductase small subunit NirD	NA|849aa|down_6|NC_009348.1_203657_206204_-	PRK14989, PRK14989, nitrite reductase subunit NirD; Provisional	NA|307aa|down_7|NC_009348.1_206494_207415_-	cd08460, PBP2_DntR_like_1, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to DntR, which is involved in the catabolism of dinitrotoluene; contains the type 2 periplasmic binding fold	NA|465aa|down_8|NC_009348.1_207605_209000_+	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|443aa|down_9|NC_009348.1_209073_210402_-	PRK05201, hslU, ATP-dependent protease ATPase subunit HslU
GCF_000196395.1_ASM19639v1	NC_009348	Aeromonas salmonicida subsp. salmonicida A449, complete sequence	3	1216945-1217089	3	CRISPRCasFinder	no		WYL,csa3,DinG,cas3,DEDDh,TnsE_C	Orphan	GATGCCTGGGAACTGAAACAGAAGAATATCAAGGCCGGTGTGCCCAGGGC	50	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	NA,NA	NA|364aa|up_9|NC_009348.1_1205251_1206343_-	PRK09601, PRK09601, redox-regulated ATPase YchF	NA|199aa|up_8|NC_009348.1_1206514_1207111_-	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	NA|663aa|up_7|NC_009348.1_1207319_1209308_-	cd07409, MPP_CD73_N, CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain	NA|316aa|up_6|NC_009348.1_1209409_1210357_-	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|290aa|up_5|NC_009348.1_1210721_1211591_-	PRK00343, ipk, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional	NA|195aa|up_4|NC_009348.1_1211617_1212202_-	cd16326, LolB, LolB, an outer membrane lipoprotein receptor	NA|419aa|up_3|NC_009348.1_1212322_1213579_+	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed	NA|363aa|up_2|NC_009348.1_1213632_1214721_+	PRK00591, prfA, peptide chain release factor 1; Validated	NA|290aa|up_1|NC_009348.1_1214770_1215640_+	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional	NA|128aa|up_0|NC_009348.1_1215684_1216068_+	pfam04247, SirB, Invasion gene expression up-regulator, SirB	NA|285aa|down_0|NC_009348.1_1217145_1218000_+	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional	NA|428aa|down_1|NC_009348.1_1218304_1219588_+	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed	NA|127aa|down_2|NC_009348.1_1219694_1220075_-	TIGR04365, Autonomous_glycyl_radical_cofactor, autonomous glycyl radical cofactor GrcA	NA|344aa|down_3|NC_009348.1_1220369_1221401_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|223aa|down_4|NC_009348.1_1221866_1222535_+	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|183aa|down_5|NC_009348.1_1222781_1223330_+	COG3945, COG3945, Uncharacterized conserved protein [Function unknown]	NA|61aa|down_6|NC_009348.1_1223378_1223561_-	pfam12065, DUF3545, Protein of unknown function (DUF3545)	NA|317aa|down_7|NC_009348.1_1223720_1224671_-	PRK05269, PRK05269, transaldolase B; Provisional	NA|481aa|down_8|NC_009348.1_1225413_1226856_+	pfam01235, Na_Ala_symp, Sodium:alanine symporter family	NA|658aa|down_9|NC_009348.1_1226958_1228932_-	pfam11992, DUF3488, Domain of unknown function (DUF3488)
GCF_000196395.1_ASM19639v1	NC_009348	Aeromonas salmonicida subsp. salmonicida A449, complete sequence	4	1684946-1685069	4	CRISPRCasFinder	no		WYL,csa3,DinG,cas3,DEDDh,TnsE_C	Orphan	TGTTGCCGCGGACGATTACGCTTCGCTAATCGACCCTACA	40	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	NA,NA|103aa|down_0|NC_009348.1_1685187_1685496_+	NA|323aa|up_9|NC_009348.1_1673510_1674479_-	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|258aa|up_8|NC_009348.1_1674586_1675360_+	PRK06172, PRK06172, SDR family oxidoreductase	NA|59aa|up_7|NC_009348.1_1675513_1675690_-	pfam12244, DUF3606, Protein of unknown function (DUF3606)	NA|255aa|up_6|NC_009348.1_1676153_1676918_-	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|237aa|up_5|NC_009348.1_1676914_1677625_-	pfam14091, DUF4269, Domain of unknown function (DUF4269)	NA|166aa|up_4|NC_009348.1_1677614_1678112_-	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|459aa|up_3|NC_009348.1_1678303_1679680_+	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|344aa|up_2|NC_009348.1_1679916_1680948_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|492aa|up_1|NC_009348.1_1681504_1682980_-	pfam13175, AAA_15, AAA ATPase domain	NA|353aa|up_0|NC_009348.1_1683109_1684168_-	COG4469, CoiA, Competence protein CoiA-like family, contains a predicted nuclease    domain [General function prediction only]	NA|103aa|down_0|NC_009348.1_1685187_1685496_+	NA	NA|249aa|down_1|NC_009348.1_1687424_1688171_-	cd13704, PBP2_HisK, The periplasmic sensor domain of histidine kinase receptors; the type 2 periplasmic binding fold protein	NA|168aa|down_2|NC_009348.1_1689106_1689610_-	pfam14345, GDYXXLXY, GDYXXLXY protein	NA|336aa|down_3|NC_009348.1_1689606_1690614_-	pfam14351, DUF4401, Domain of unknown function (DUF4401)	NA|313aa|down_4|NC_009348.1_1690650_1691589_-	pfam09925, DUF2157, Predicted membrane protein (DUF2157)	NA|186aa|down_5|NC_009348.1_1691841_1692399_-	COG2119, COG2119, Predicted membrane protein [Function unknown]	NA|110aa|down_6|NC_009348.1_1692642_1692972_-	PRK09019, PRK09019, stress response translation initiation inhibitor YciH	NA|76aa|down_7|NC_009348.1_1693091_1693319_+	pfam04023, FeoA, FeoA domain	NA|81aa|down_8|NC_009348.1_1695581_1695824_+	pfam09012, FeoC, FeoC like transcriptional regulator	NA|160aa|down_9|NC_009348.1_1695919_1696399_-	TIGR04366, hypothetical_protein, cupin fold metalloprotein, WbuC family
GCF_000196395.1_ASM19639v1	NC_009348	Aeromonas salmonicida subsp. salmonicida A449, complete sequence	5	2868865-2868960	5	CRISPRCasFinder	no		WYL,csa3,DinG,cas3,DEDDh,TnsE_C	Orphan	CAAACATATGCAGCTCCATTGCA	23	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	NA|131aa|up_6|NC_009348.1_2849530_2849923_+,NA|320aa|up_4|NC_009348.1_2851647_2852607_+,NA	NA|304aa|up_9|NC_009348.1_2845982_2846894_-	PRK12802, PRK12802, flagellin; Provisional	NA|306aa|up_8|NC_009348.1_2847476_2848394_-	PRK08869, PRK08869, polar flagellin E	NA|211aa|up_7|NC_009348.1_2848795_2849428_+	COG2860, COG2860, Predicted membrane protein [Function unknown]	NA|131aa|up_6|NC_009348.1_2849530_2849923_+	NA	NA|483aa|up_5|NC_009348.1_2850021_2851470_-	PRK01269, PRK01269, tRNA s(4)U8 sulfurtransferase; Provisional	NA|320aa|up_4|NC_009348.1_2851647_2852607_+	NA	NA|785aa|up_3|NC_009348.1_2852680_2855035_-	PRK11240, PRK11240, penicillin-binding protein 1C; Provisional	NA|262aa|up_2|NC_009348.1_2864929_2865715_+	PRK11145, pflA, pyruvate formate lyase 1-activating protein	NA|175aa|up_1|NC_009348.1_2866548_2867073_-	pfam09411, PagL, Lipid A 3-O-deacylase (PagL)	NA|231aa|up_0|NC_009348.1_2867434_2868127_-	COG4160, ArtM, ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism]	NA|258aa|down_0|NC_009348.1_2869227_2870001_-	cd13703, PBP2_HisJ_LAO, Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold	NA|257aa|down_1|NC_009348.1_2870050_2870821_-	COG4598, HisP, ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]	NA|301aa|down_2|NC_009348.1_2871352_2872255_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|207aa|down_3|NC_009348.1_2872397_2873018_+	COG3124, COG3124, Uncharacterized protein conserved in bacteria [Function unknown]	NA|132aa|down_4|NC_009348.1_2873070_2873466_-	pfam09842, DUF2069, Predicted membrane protein (DUF2069)	NA|117aa|down_5|NC_009348.1_2873462_2873813_-	cd03034, ArsC_ArsC, Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli	NA|160aa|down_6|NC_009348.1_2873871_2874351_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|478aa|down_7|NC_009348.1_2874546_2875980_-	COG4783, COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only]	NA|78aa|down_8|NC_009348.1_2876129_2876363_+	pfam01206, TusA, Sulfurtransferase TusA	NA|357aa|down_9|NC_009348.1_2876388_2877459_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]
GCF_000196395.1_ASM19639v1	NC_009348	Aeromonas salmonicida subsp. salmonicida A449, complete sequence	6	3261270-3261404	6	CRISPRCasFinder	no		WYL,csa3,DinG,cas3,DEDDh,TnsE_C	Orphan	CAATAAGCAGGTTTATGCCAATCGCGCCGCTGGCAAGATCCCACTGAGC	49	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	NA,NA|126aa|down_5|NC_009348.1_3266461_3266839_-,NA|91aa|down_6|NC_009348.1_3266914_3267187_+,NA|213aa|down_8|NC_009348.1_3268033_3268672_+	NA|113aa|up_9|NC_009348.1_3248514_3248853_-	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|348aa|up_8|NC_009348.1_3249040_3250084_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|86aa|up_7|NC_009348.1_3250285_3250543_+	pfam11730, DUF3297, Protein of unknown function (DUF3297)	NA|426aa|up_6|NC_009348.1_3250677_3251955_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|200aa|up_5|NC_009348.1_3252006_3252606_-	PRK09943, PRK09943, HTH-type transcriptional regulator PuuR	NA|488aa|up_4|NC_009348.1_3252962_3254426_+	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like	NA|435aa|up_3|NC_009348.1_3254672_3255977_+	PRK07495, PRK07495, 4-aminobutyrate--2-oxoglutarate transaminase	NA|442aa|up_2|NC_009348.1_3256185_3257511_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|450aa|up_1|NC_009348.1_3257959_3259309_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|385aa|up_0|NC_009348.1_3259499_3260654_+	TIGR01013, Sodium-dependent_phosphate_transport_protein, Phosphate:Na+ Symporter (PNaS) Family	NA|256aa|down_0|NC_009348.1_3261701_3262469_+	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine	NA|226aa|down_1|NC_009348.1_3262619_3263297_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|388aa|down_2|NC_009348.1_3263406_3264570_-	PRK03699, PRK03699, putative transporter; Provisional	NA|234aa|down_3|NC_009348.1_3264625_3265327_-	PRK13374, PRK13374, DeoD-type purine-nucleoside phosphorylase	NA|194aa|down_4|NC_009348.1_3265652_3266234_-	pfam07081, DUF1349, Protein of unknown function (DUF1349)	NA|126aa|down_5|NC_009348.1_3266461_3266839_-	NA	NA|91aa|down_6|NC_009348.1_3266914_3267187_+	NA	NA|172aa|down_7|NC_009348.1_3267440_3267956_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|213aa|down_8|NC_009348.1_3268033_3268672_+	NA	NA|344aa|down_9|NC_009348.1_3268687_3269719_-	pfam13358, DDE_3, DDE superfamily endonuclease
GCF_000196395.1_ASM19639v1	NC_009348	Aeromonas salmonicida subsp. salmonicida A449, complete sequence	7	3324082-3324172	7	CRISPRCasFinder	no		WYL,csa3,DinG,cas3,DEDDh,TnsE_C	Orphan	TGTCAGGTGAATACCATCTCCATACA	26	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	NA|75aa|up_8|NC_009348.1_3313434_3313659_-,NA	NA|394aa|up_9|NC_009348.1_3312175_3313357_+	cd03879, M28_AAP, M28 Zn-peptidase Aeromonas (Vibrio) proteolytica aminopeptidase	NA|75aa|up_8|NC_009348.1_3313434_3313659_-	NA	NA|471aa|up_7|NC_009348.1_3313962_3315375_+	PRK09206, PRK09206, pyruvate kinase PykF	NA|1103aa|up_6|NC_009348.1_3315522_3318831_+	PRK11281, PRK11281, mechanosensitive channel MscK	NA|157aa|up_5|NC_009348.1_3318957_3319428_+	pfam13356, Arm-DNA-bind_3, Arm DNA-binding domain	NA|238aa|up_4|NC_009348.1_3319468_3320182_+	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|70aa|up_3|NC_009348.1_3320519_3320729_+	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|241aa|up_2|NC_009348.1_3321043_3321766_+	PHA02529, O, capsid-scaffolding protein; Provisional	NA|344aa|up_1|NC_009348.1_3321867_3322899_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|347aa|up_0|NC_009348.1_3322958_3323999_-	pfam00665, rve, Integrase core domain	NA|286aa|down_0|NC_009348.1_3324287_3325145_+	pfam02634, FdhD-NarQ, FdhD/NarQ family	NA|293aa|down_1|NC_009348.1_3325148_3326027_+	pfam12727, PBP_like, PBP superfamily domain	NA|720aa|down_2|NC_009348.1_3326151_3328311_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|282aa|down_3|NC_009348.1_3329952_3330798_+	COG2998, TupA, tungsten ABC transporter substrate-binding protein [Coenzyme metabolism]	NA|234aa|down_4|NC_009348.1_3330862_3331564_+	COG4662, TupA, ABC-type tungstate transport system, periplasmic component [Coenzyme metabolism]	NA|232aa|down_5|NC_009348.1_3331679_3332375_+	COG1122, CbiO, ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]	NA|216aa|down_6|NC_009348.1_3332346_3332994_+	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|582aa|down_7|NC_009348.1_3332990_3334736_+	PRK14491, PRK14491, putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA; Provisional	NA|353aa|down_8|NC_009348.1_3334799_3335858_+	COG1289, COG1289, Predicted membrane protein [Function unknown]	NA|458aa|down_9|NC_009348.1_3335926_3337300_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]
GCF_000196395.1_ASM19639v1	NC_009348	Aeromonas salmonicida subsp. salmonicida A449, complete sequence	8	3675008-3675120	8	CRISPRCasFinder	no		WYL,csa3,DinG,cas3,DEDDh,TnsE_C	Orphan	AAAACAGGGGCACCAGGCCCCTGTTTCT	28	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	NA|68aa|up_9|NC_009348.1_3664599_3664803_-,NA|51aa|down_9|NC_009348.1_3686592_3686745_-	NA|68aa|up_9|NC_009348.1_3664599_3664803_-	NA	NA|455aa|up_8|NC_009348.1_3665125_3666490_-	PRK04926, dgt, deoxyguanosinetriphosphate triphosphohydrolase; Provisional	NA|771aa|up_7|NC_009348.1_3666545_3668858_-	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	NA|333aa|up_6|NC_009348.1_3669065_3670064_+	pfam11059, DUF2860, Protein of unknown function (DUF2860)	NA|233aa|up_5|NC_009348.1_3670133_3670832_-	pfam11813, DUF3334, Protein of unknown function (DUF3334)	NA|146aa|up_4|NC_009348.1_3670930_3671368_-	pfam01230, HIT, HIT domain	NA|211aa|up_3|NC_009348.1_3671439_3672072_-	pfam09829, DUF2057, Uncharacterized protein conserved in bacteria (DUF2057)	NA|301aa|up_2|NC_009348.1_3672143_3673046_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|201aa|up_1|NC_009348.1_3673140_3673743_+	PRK07578, PRK07578, short chain dehydrogenase; Provisional	NA|368aa|up_0|NC_009348.1_3673871_3674975_-	PRK13960, PRK13960, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional	NA|296aa|down_0|NC_009348.1_3676235_3677123_-	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|178aa|down_1|NC_009348.1_3677390_3677924_+	PRK11589, gcvR, glycine cleavage system transcriptional repressor; Provisional	NA|155aa|down_2|NC_009348.1_3677946_3678411_+	PRK09437, bcp, thioredoxin-dependent thiol peroxidase; Reviewed	NA|167aa|down_3|NC_009348.1_3678853_3679354_+	PRK05445, PRK05445, YfbU family protein	NA|147aa|down_4|NC_009348.1_3679414_3679855_-	pfam04217, DUF412, Protein of unknown function, DUF412	NA|401aa|down_5|NC_009348.1_3680157_3681360_+	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|718aa|down_6|NC_009348.1_3681430_3683584_+	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|165aa|down_7|NC_009348.1_3683989_3684484_-	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed	NA|573aa|down_8|NC_009348.1_3684483_3686202_-	PRK08979, PRK08979, acetolactate synthase 3 large subunit	NA|51aa|down_9|NC_009348.1_3686592_3686745_-	NA
GCF_000196395.1_ASM19639v1	NC_009348	Aeromonas salmonicida subsp. salmonicida A449, complete sequence	9	3920438-3920537	9	CRISPRCasFinder	no	cas3	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	Unclear	TGCCTGCGCCGATAAAGGCGAGG	23	0	0	NA	NA	NA	1	1	Unclear	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	NA|100aa|up_3|NC_009348.1_3917964_3918264_+,NA|77aa|down_7|NC_009348.1_3928115_3928346_-	NA|147aa|up_9|NC_009348.1_3912634_3913075_-	pfam04314, PCuAC, Copper chaperone PCu(A)C	NA|250aa|up_8|NC_009348.1_3913164_3913914_+	PRK06688, PRK06688, enoyl-CoA hydratase; Provisional	NA|143aa|up_7|NC_009348.1_3913917_3914346_-	pfam10952, DUF2753, Protein of unknown function (DUF2753)	NA|221aa|up_6|NC_009348.1_3914651_3915314_+	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|236aa|up_5|NC_009348.1_3915361_3916069_-	pfam08857, ParBc_2, Putative ParB-like nuclease	NA|535aa|up_4|NC_009348.1_3916250_3917855_+	PRK15104, PRK15104, oligopeptide ABC transporter substrate-binding protein OppA; Provisional	NA|100aa|up_3|NC_009348.1_3917964_3918264_+	NA	NA|140aa|up_2|NC_009348.1_3918332_3918752_-	pfam14467, DUF4426, Domain of unknown function (DUF4426)	NA|100aa|up_1|NC_009348.1_3918770_3919070_-	PRK05090, PRK05090, hypothetical protein; Validated	NA|184aa|up_0|NC_009348.1_3919069_3919621_-	pfam02325, YGGT, YGGT family	NA|234aa|down_0|NC_009348.1_3920564_3921266_-	cd06824, PLPDE_III_Yggs_like, Pyridoxal 5-phosphate (PLP)-binding TIM barrel domain of Type III PLP-Dependent Enzymes, Yggs-like proteins	NA|345aa|down_1|NC_009348.1_3921305_3922340_+	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|370aa|down_2|NC_009348.1_3922375_3923485_+	COG5008, PilU, Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion]	NA|258aa|down_3|NC_009348.1_3923516_3924290_+	PRK02101, PRK02101, peroxide stress protein YaaA	cas3|408aa|down_4|NC_009348.1_3924478_3925702_-	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional	NA|237aa|down_5|NC_009348.1_3925830_3926541_+	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|436aa|down_6|NC_009348.1_3926732_3928040_+	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein	NA|77aa|down_7|NC_009348.1_3928115_3928346_-	NA	NA|154aa|down_8|NC_009348.1_3928350_3928812_-	cd17906, CheX, chemotaxis phosphatase CheX	NA|153aa|down_9|NC_009348.1_3928801_3929260_-	PRK11639, PRK11639, zinc uptake transcriptional repressor Zur
GCF_000196395.1_ASM19639v1	NC_009348	Aeromonas salmonicida subsp. salmonicida A449, complete sequence	10	4446086-4446228	10	CRISPRCasFinder	no		WYL,csa3,DinG,cas3,DEDDh,TnsE_C	Orphan	CGCCATTTGACAGGGTTCGGACTGATCTCG	30	0	0	NA	NA	NA	2	2	Orphan	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	NA|72aa|up_8|NC_009348.1_4437804_4438020_-,NA|58aa|down_1|NC_009348.1_4447988_4448162_+	NA|447aa|up_9|NC_009348.1_4436467_4437808_-	PRK10361, PRK10361, DNA recombination protein RmuC; Provisional	NA|72aa|up_8|NC_009348.1_4437804_4438020_-	NA	NA|171aa|up_7|NC_009348.1_4438158_4438671_+	cd10564, NapF_like, NapF, iron-sulfur subunit of periplasmic nitrate reductase	NA|151aa|up_6|NC_009348.1_4438772_4439225_-	PRK11014, PRK11014, HTH-type transcriptional repressor NsrR	NA|280aa|up_5|NC_009348.1_4439523_4440363_-	cd01947, Guanosine_kinase_like, Guanosine kinase-like sugar kinases	NA|372aa|up_4|NC_009348.1_4440479_4441595_-	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|252aa|up_3|NC_009348.1_4441591_4442347_-	PRK05665, PRK05665, amidotransferase; Provisional	NA|499aa|up_2|NC_009348.1_4442432_4443929_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|444aa|up_1|NC_009348.1_4444035_4445367_-	PRK09221, PRK09221, beta alanine--pyruvate transaminase; Provisional	NA|181aa|up_0|NC_009348.1_4445540_4446083_+	PRK09943, PRK09943, HTH-type transcriptional regulator PuuR	NA|499aa|down_0|NC_009348.1_4446366_4447863_+	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like	NA|58aa|down_1|NC_009348.1_4447988_4448162_+	NA	NA|301aa|down_2|NC_009348.1_4448287_4449190_+	PRK15430, PRK15430, EamA family transporter RarD	NA|273aa|down_3|NC_009348.1_4449258_4450077_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|216aa|down_4|NC_009348.1_4450193_4450841_+	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein	NA|921aa|down_5|NC_009348.1_4450977_4453740_-	PRK15122, PRK15122, magnesium-transporting ATPase; Provisional	NA|345aa|down_6|NC_009348.1_4455087_4456122_+	pfam04143, Sulf_transp, Sulphur transport	NA|207aa|down_7|NC_009348.1_4456232_4456853_-	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|296aa|down_8|NC_009348.1_4456954_4457842_+	cd08477, PBP2_CrgA_like_8, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|236aa|down_9|NC_009348.1_4457868_4458576_-	cd16338, CpcT, T-type phycobiliprotein (PBP) lyase
GCF_000196395.1_ASM19639v1	NC_009348	Aeromonas salmonicida subsp. salmonicida A449, complete sequence	11	4528834-4528927	11	CRISPRCasFinder	no		WYL,csa3,DinG,cas3,DEDDh,TnsE_C	Orphan	TCTTCGCAATCTCAAGCTGTTTCTCC	26	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DinG,cas3,DEDDh,TnsE_C	NA|63aa|up_2|NC_009348.1_4524809_4524998_-,NA|64aa|down_1|NC_009348.1_4530823_4531015_+	NA|56aa|up_9|NC_009348.1_4519827_4519995_-	PRK00595, rpmG, 50S ribosomal protein L33; Validated	NA|79aa|up_8|NC_009348.1_4520006_4520243_-	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|221aa|up_7|NC_009348.1_4520379_4521042_-	PRK00024, PRK00024, DNA repair protein RadC	NA|401aa|up_6|NC_009348.1_4521189_4522392_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|153aa|up_5|NC_009348.1_4522537_4522996_+	PRK00601, dut, dUTP diphosphatase	NA|199aa|up_4|NC_009348.1_4523064_4523661_+	PRK09480, slmA, division inhibitor protein; Provisional	NA|279aa|up_3|NC_009348.1_4523811_4524648_+	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	NA|63aa|up_2|NC_009348.1_4524809_4524998_-	NA	NA|550aa|up_1|NC_009348.1_4525420_4527070_+	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|494aa|up_0|NC_009348.1_4527226_4528708_-	PRK05225, PRK05225, ketol-acid reductoisomerase; Validated	NA|291aa|down_0|NC_009348.1_4529778_4530651_-	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3	NA|64aa|down_1|NC_009348.1_4530823_4531015_+	NA	NA|857aa|down_2|NC_009348.1_4531106_4533677_+	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion]	NA|175aa|down_3|NC_009348.1_4539443_4539968_-	PRK11104, hemG, menaquinone-dependent protoporphyrinogen IX dehydrogenase	NA|486aa|down_4|NC_009348.1_4539975_4541433_-	PRK10750, PRK10750, Trk system potassium transporter TrkH	NA|206aa|down_5|NC_009348.1_4541469_4542087_-	PRK11568, PRK11568, IMPACT family protein	NA|441aa|down_6|NC_009348.1_4542086_4543409_-	PRK13607, PRK13607, proline dipeptidase; Provisional	NA|646aa|down_7|NC_009348.1_4543599_4545537_+	PRK03584, PRK03584, acetoacetate--CoA ligase	NA|716aa|down_8|NC_009348.1_4545741_4547889_+	PRK11730, fadB, fatty acid oxidation complex subunit alpha FadB	NA|388aa|down_9|NC_009348.1_4547910_4549074_+	PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed
