assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000199675.1_ASM19967v1	NC_014960	Anaerolinea thermophila UNI-1, complete genome	1	184285-185155	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no		csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	Orphan	GTCTTAATCCCCTTCCGGGGCTTCTTAGATTCTGAC,GTCTTAATCCCCTTCCGGGGCTTCTTAGATTCTGAC,GTCTTAATCCCCTTCCGGGGCTTCTTAGATTCTGAC	36,36,36	0	0	NA	NA	NA:NA:NA	11,11,10	11	Orphan	csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	NA|184aa|up_7|NC_014960.1_174853_175405_+,NA|80aa|up_6|NC_014960.1_175438_175678_-,NA|224aa|up_0|NC_014960.1_183345_184017_-,NA|159aa|down_1|NC_014960.1_186061_186538_+,NA|289aa|down_5|NC_014960.1_188807_189674_+,NA|269aa|down_8|NC_014960.1_191927_192734_-	NA|363aa|up_9|NC_014960.1_173216_174305_+	PRK09354, recA, recombinase A; Provisional	NA|176aa|up_8|NC_014960.1_174288_174816_+	cd14947, NBR1_like, Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins	NA|184aa|up_7|NC_014960.1_174853_175405_+	NA	NA|80aa|up_6|NC_014960.1_175438_175678_-	NA	NA|286aa|up_5|NC_014960.1_175681_176539_-	TIGR03928, T7_EssCb_Firm, type VII secretion protein EssC, C-terminal domain	NA|380aa|up_4|NC_014960.1_176623_177763_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|913aa|up_3|NC_014960.1_177941_180680_-	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|193aa|up_2|NC_014960.1_180879_181458_-	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|286aa|up_1|NC_014960.1_182378_183236_+	TIGR03716, R_switched_YkoY, integral membrane protein, YkoY family	NA|224aa|up_0|NC_014960.1_183345_184017_-	NA	NA|164aa|down_0|NC_014960.1_185433_185925_-	cd01055, Nonheme_Ferritin, nonheme-containing ferritins	NA|159aa|down_1|NC_014960.1_186061_186538_+	NA	NA|195aa|down_2|NC_014960.1_186534_187119_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|297aa|down_3|NC_014960.1_187259_188150_+	PRK04180, PRK04180, pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA|192aa|down_4|NC_014960.1_188160_188736_+	PRK13525, PRK13525, pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA|289aa|down_5|NC_014960.1_188807_189674_+	NA	NA|539aa|down_6|NC_014960.1_189678_191295_+	COG3854, SpoIIIAA, ncharacterized protein conserved in bacteria [Function unknown]	NA|206aa|down_7|NC_014960.1_191362_191980_+	PRK00698, tmk, thymidylate kinase; Validated	NA|269aa|down_8|NC_014960.1_191927_192734_-	NA	NA|681aa|down_9|NC_014960.1_193003_195046_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain
GCF_000199675.1_ASM19967v1	NC_014960	Anaerolinea thermophila UNI-1, complete genome	2	602853-602962	2	CRISPRCasFinder	no		csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	Orphan	GGGTGTTCCCTGATGAAGCGCTGGTTAGCCGGACTT	36	0	0	NA	NA	NA	1	1	Orphan	csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	NA|521aa|up_9|NC_014960.1_590792_592355_-,NA|99aa|up_2|NC_014960.1_598610_598907_+,NA|85aa|down_3|NC_014960.1_609519_609774_+,NA|164aa|down_5|NC_014960.1_610680_611172_+	NA|521aa|up_9|NC_014960.1_590792_592355_-	NA	NA|194aa|up_8|NC_014960.1_592832_593414_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|137aa|up_7|NC_014960.1_593658_594069_+	COG3889, COG3889, Predicted solute binding protein [General function prediction only]	NA|355aa|up_6|NC_014960.1_594081_595146_+	cd05656, M42_Frv, M42 Peptidase, endoglucanases	NA|357aa|up_5|NC_014960.1_595148_596219_+	cd05656, M42_Frv, M42 Peptidase, endoglucanases	NA|333aa|up_4|NC_014960.1_596269_597268_+	cd05656, M42_Frv, M42 Peptidase, endoglucanases	NA|450aa|up_3|NC_014960.1_597264_598614_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|99aa|up_2|NC_014960.1_598610_598907_+	NA	NA|353aa|up_1|NC_014960.1_598968_600027_+	PRK09358, PRK09358, adenosine deaminase; Provisional	NA|258aa|up_0|NC_014960.1_600040_600814_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|803aa|down_0|NC_014960.1_604502_606911_-	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]	NA|648aa|down_1|NC_014960.1_607092_609036_-	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase	NA|95aa|down_2|NC_014960.1_609047_609332_-	cd17040, Ubl_MoaD_like, ubiquitin-like (Ubl) domain found in a group of small sulfide carrier proteins	NA|85aa|down_3|NC_014960.1_609519_609774_+	NA	NA|270aa|down_4|NC_014960.1_609813_610623_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|164aa|down_5|NC_014960.1_610680_611172_+	NA	NA|575aa|down_6|NC_014960.1_611556_613281_+	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|415aa|down_7|NC_014960.1_613320_614565_+	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|273aa|down_8|NC_014960.1_615498_616317_+	pfam04199, Cyclase, Putative cyclase	NA|292aa|down_9|NC_014960.1_616396_617272_+	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]
GCF_000199675.1_ASM19967v1	NC_014960	Anaerolinea thermophila UNI-1, complete genome	3	757015-762020	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no		csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	Orphan	GTTTCAGTATCCACTAACGGATCGAGGGGGATGCAAC,GTTTCAGTATCCACTAACGGATCGAGGGGGATGCAAC,GTTTCAGTATCCACTAACGGATCGAGGGGGATGCAAC	37,37,37	0	0	NA	NA	NA:NA:NA	68,68,67	68	Orphan	csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	NA|172aa|up_9|NC_014960.1_748333_748849_+,NA|177aa|up_7|NC_014960.1_749296_749827_+,NA|572aa|up_1|NC_014960.1_753985_755701_-,NA|116aa|down_3|NC_014960.1_765350_765698_+,NA|95aa|down_6|NC_014960.1_768065_768350_+,NA|51aa|down_8|NC_014960.1_769012_769165_-	NA|172aa|up_9|NC_014960.1_748333_748849_+	NA	NA|150aa|up_8|NC_014960.1_748845_749295_+	pfam12158, DUF3592, Protein of unknown function (DUF3592)	NA|177aa|up_7|NC_014960.1_749296_749827_+	NA	NA|180aa|up_6|NC_014960.1_749847_750387_+	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|241aa|up_5|NC_014960.1_750390_751113_+	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes	NA|285aa|up_4|NC_014960.1_751106_751961_-	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|264aa|up_3|NC_014960.1_751977_752769_-	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|341aa|up_2|NC_014960.1_752800_753823_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|572aa|up_1|NC_014960.1_753985_755701_-	NA	NA|351aa|up_0|NC_014960.1_755820_756873_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|501aa|down_0|NC_014960.1_762229_763732_-	cd06460, M32_Taq, Peptidase family M32, which includes thermostable carboxypeptidases TaqCP, PfuCP and FisCP	NA|315aa|down_1|NC_014960.1_763801_764746_-	cd12173, PGDH_4, Phosphoglycerate dehydrogenases, NAD-binding and catalytic domains	NA|149aa|down_2|NC_014960.1_764839_765286_-	pfam02502, LacAB_rpiB, Ribose/Galactose Isomerase	NA|116aa|down_3|NC_014960.1_765350_765698_+	NA	NA|141aa|down_4|NC_014960.1_765747_766170_+	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|350aa|down_5|NC_014960.1_766183_767233_+	cd05657, M42_glucanase_like, M42 Peptidase, endoglucanase-like subfamily	NA|95aa|down_6|NC_014960.1_768065_768350_+	NA	NA|137aa|down_7|NC_014960.1_768353_768764_+	pfam13470, PIN_3, PIN domain	NA|51aa|down_8|NC_014960.1_769012_769165_-	NA	NA|295aa|down_9|NC_014960.1_769660_770545_-	COG0583, LysR, Transcriptional regulator [Transcription]
GCF_000199675.1_ASM19967v1	NC_014960	Anaerolinea thermophila UNI-1, complete genome	4	1369172-1384073	4,3,3,4,5	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	Type I-C, Type I-U?,Type I-U	GTTTCAATCCACGCCTCCGCGAGGGAGGCGAC,GTTTCAATCCACGCCTCCGCGAGGGAGGCGAC,GTTTCAATCCACGCCTCCGCGAGGGAGGCGAC,GTTTCAATCCACGCCTCCGCGAGGGAGGCGAC,TTTTCAATCCACGCCTCCGCGAGGGAGGCGAC	32,32,32,32,32	2	2	1383679-1383712|1384008-1384041	NC_014960.1_2637248-2637281|NC_014960.1_2673308-2673341	I-C:I-C:I-C:I-C:I-C	224,224,216,216,216	224	TypeI-C,TypeI-U?,TypeI-U	csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	NA,NA|95aa|down_8|NC_014960.1_1394679_1394964_+	NA|436aa|up_9|NC_014960.1_1355822_1357130_-	TIGR03938, hypothetical_protein_Pcar_2791, poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB	NA|361aa|up_8|NC_014960.1_1357116_1358199_-	TIGR03450, mycothiol_INO1, inositol 1-phosphate synthase, Actinobacterial type	NA|898aa|up_7|NC_014960.1_1358310_1361004_-	PRK09277, PRK09277, aconitate hydratase AcnA	NA|292aa|up_6|NC_014960.1_1361333_1362209_+	cd13624, PBP2_Arg_Lys_His, Substrate binding domain of the arginine-, lysine-, histidine-binding protein ArtJ; the type 2 periplasmic binding protein fold	NA|292aa|up_5|NC_014960.1_1362276_1363152_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|249aa|up_4|NC_014960.1_1363135_1363882_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|448aa|up_3|NC_014960.1_1363930_1365274_+	PRK09569, PRK09569, citrate (Si)-synthase	NA|378aa|up_2|NC_014960.1_1365283_1366417_+	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|420aa|up_1|NC_014960.1_1366403_1367663_+	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|401aa|up_0|NC_014960.1_1367677_1368880_-	cd14747, PBP2_MalE, Maltose-binding protein MalE; possesses type 2 periplasmic binding fold	cas2|97aa|down_0|NC_014960.1_1384250_1384541_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|344aa|down_1|NC_014960.1_1384572_1385604_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|223aa|down_2|NC_014960.1_1385607_1386276_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|289aa|down_3|NC_014960.1_1386340_1387207_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8c|630aa|down_4|NC_014960.1_1387305_1389195_-	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas5|224aa|down_5|NC_014960.1_1389191_1389863_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|1069aa|down_6|NC_014960.1_1389941_1393148_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	NA|366aa|down_7|NC_014960.1_1393569_1394667_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|95aa|down_8|NC_014960.1_1394679_1394964_+	NA	NA|117aa|down_9|NC_014960.1_1395865_1396216_-	pfam09966, DUF2200, Uncharacterized protein conserved in bacteria (DUF2200)
GCF_000199675.1_ASM19967v1	NC_014960	Anaerolinea thermophila UNI-1, complete genome	5	2413728-2413787	5	CRISPRCasFinder	no		csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	Orphan	AAACGCTGGCGTAATCGCTGGCG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	NA|178aa|up_9|NC_014960.1_2407993_2408527_-,NA|161aa|up_7|NC_014960.1_2409401_2409884_-,NA|100aa|up_6|NC_014960.1_2409880_2410180_-,NA|193aa|up_5|NC_014960.1_2410273_2410852_-,NA|60aa|up_3|NC_014960.1_2411249_2411429_-,NA|72aa|up_1|NC_014960.1_2412250_2412466_-,NA|143aa|down_0|NC_014960.1_2413848_2414277_-,NA|93aa|down_3|NC_014960.1_2415799_2416078_-,NA|161aa|down_6|NC_014960.1_2418626_2419109_-,NA|110aa|down_7|NC_014960.1_2419029_2419359_-,NA|221aa|down_9|NC_014960.1_2419570_2420233_-	NA|178aa|up_9|NC_014960.1_2407993_2408527_-	NA	NA|293aa|up_8|NC_014960.1_2408526_2409405_-	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC	NA|161aa|up_7|NC_014960.1_2409401_2409884_-	NA	NA|100aa|up_6|NC_014960.1_2409880_2410180_-	NA	NA|193aa|up_5|NC_014960.1_2410273_2410852_-	NA	NA|130aa|up_4|NC_014960.1_2410848_2411238_-	TIGR04256, conserved_hypothetical_protein, GxxExxY protein	NA|60aa|up_3|NC_014960.1_2411249_2411429_-	NA	NA|265aa|up_2|NC_014960.1_2411484_2412279_-	COG1484, DnaC, DNA replication protein [DNA replication, recombination, and repair]	NA|72aa|up_1|NC_014960.1_2412250_2412466_-	NA	NA|396aa|up_0|NC_014960.1_2412440_2413628_-	pfam13730, HTH_36, Helix-turn-helix domain	NA|143aa|down_0|NC_014960.1_2413848_2414277_-	NA	NA|271aa|down_1|NC_014960.1_2414280_2415093_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|238aa|down_2|NC_014960.1_2415089_2415803_-	cd02042, ParAB_family, partition proteins ParAB family	NA|93aa|down_3|NC_014960.1_2415799_2416078_-	NA	NA|442aa|down_4|NC_014960.1_2416301_2417627_-	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|315aa|down_5|NC_014960.1_2417623_2418568_-	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|161aa|down_6|NC_014960.1_2418626_2419109_-	NA	NA|110aa|down_7|NC_014960.1_2419029_2419359_-	NA	NA|73aa|down_8|NC_014960.1_2419355_2419574_-	COG3620, COG3620, Predicted transcriptional regulator with C-terminal CBS domains [Transcription]	NA|221aa|down_9|NC_014960.1_2419570_2420233_-	NA
GCF_000199675.1_ASM19967v1	NC_014960	Anaerolinea thermophila UNI-1, complete genome	6	2688386-2688575	6,6	PILER-CR,CRISPRCasFinder	no	csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas1,cas2	csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	Type III-B,Type III-A,Type III-D,Type III-C	GTCTTAATCCCCTTCCGGGGCTTCTTAGATTCTGACTG,GTCAGAATCTAAGAAGCCCCGGAAGGGGATTAAGAC	38,36	0	0	NA	NA	NA:NA	2,2	2	TypeIII-B,TypeIII-A,TypeIII-D,TypeIII-C	csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	NA,NA	csm2gr11|137aa|up_9|NC_014960.1_2679924_2680335_+	pfam03750, Csm2_III-A, Csm2 Type III-A	csm3gr7|265aa|up_8|NC_014960.1_2680362_2681157_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|374aa|up_7|NC_014960.1_2681167_2682289_+	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4	csm5gr7|380aa|up_6|NC_014960.1_2682281_2683421_+	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	csx1|411aa|up_5|NC_014960.1_2683417_2684650_+	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	csx1|307aa|up_4|NC_014960.1_2684657_2685578_+	pfam09002, DUF1887, Domain of unknown function (DUF1887)	csx15|135aa|up_3|NC_014960.1_2685586_2685991_+	cd09766, Csx15_I-U, CRISPR/Cas system-associated protein Csx15	cas6|286aa|up_2|NC_014960.1_2685987_2686845_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas1|338aa|up_1|NC_014960.1_2686872_2687886_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|97aa|up_0|NC_014960.1_2687885_2688176_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|261aa|down_0|NC_014960.1_2688708_2689491_-	cd06533, Glyco_transf_WecG_TagA, The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins	NA|425aa|down_1|NC_014960.1_2689487_2690762_-	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins	NA|689aa|down_2|NC_014960.1_2690722_2692789_-	pfam16889, Hepar_II_III_N, Heparinase II/III N-terminus	NA|417aa|down_3|NC_014960.1_2692773_2694024_-	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|499aa|down_4|NC_014960.1_2694020_2695517_-	COG2006, COG2006, Uncharacterized conserved protein [Function unknown]	NA|466aa|down_5|NC_014960.1_2695513_2696911_-	COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme metabolism]	NA|470aa|down_6|NC_014960.1_2696958_2698368_-	cd00947, TBP_aldolase_IIB, Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases	NA|334aa|down_7|NC_014960.1_2698372_2699374_-	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B,  AKR12C families of aldo-keto reductase (AKR)	NA|257aa|down_8|NC_014960.1_2699445_2700216_+	pfam07827, KNTase_C, KNTase C-terminal domain	NA|490aa|down_9|NC_014960.1_2700212_2701682_-	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
GCF_000199675.1_ASM19967v1	NC_014960	Anaerolinea thermophila UNI-1, complete genome	7	3033043-3033149	7	CRISPRCasFinder	no	cas3,csa3	csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	Type I-A	AAACACCGAGCCATCGTCCAGGAAAAGCGAGACGC	35	0	0	NA	NA	NA	1	1	TypeI-A	csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	NA|383aa|up_8|NC_014960.1_3020312_3021461_+,NA|70aa|up_7|NC_014960.1_3021624_3021834_+,NA|69aa|up_6|NC_014960.1_3022271_3022478_-,NA|402aa|down_1|NC_014960.1_3036167_3037373_-,NA|191aa|down_4|NC_014960.1_3042277_3042850_-	NA|430aa|up_9|NC_014960.1_3018905_3020195_+	pfam12671, Amidase_6, Putative amidase domain	NA|383aa|up_8|NC_014960.1_3020312_3021461_+	NA	NA|70aa|up_7|NC_014960.1_3021624_3021834_+	NA	NA|69aa|up_6|NC_014960.1_3022271_3022478_-	NA	NA|903aa|up_5|NC_014960.1_3023421_3026130_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|319aa|up_4|NC_014960.1_3026242_3027199_+	pfam02517, Abi, CAAX protease self-immunity	NA|112aa|up_3|NC_014960.1_3027320_3027656_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|150aa|up_2|NC_014960.1_3027662_3028112_+	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain	NA|1284aa|up_1|NC_014960.1_3028108_3031960_+	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]	NA|155aa|up_0|NC_014960.1_3031987_3032452_-	pfam04977, DivIC, Septum formation initiator	NA|821aa|down_0|NC_014960.1_3033718_3036181_+	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|402aa|down_1|NC_014960.1_3036167_3037373_-	NA	cas3|941aa|down_2|NC_014960.1_3037431_3040254_-	COG1205, COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only]	NA|642aa|down_3|NC_014960.1_3040253_3042179_-	sd00006, TPR, Tetratricopeptide repeat	NA|191aa|down_4|NC_014960.1_3042277_3042850_-	NA	NA|343aa|down_5|NC_014960.1_3042856_3043885_-	PRK06270, PRK06270, homoserine dehydrogenase; Provisional	NA|240aa|down_6|NC_014960.1_3043955_3044675_-	TIGR03843, Phosphatidylinositol_3-_and_4-kinase, conserved hypothetical protein	NA|173aa|down_7|NC_014960.1_3044744_3045263_-	COG1520, COG1520, FOG: WD40-like repeat [Function unknown]	NA|127aa|down_8|NC_014960.1_3045408_3045789_-	cd03500, SQR_TypeA_SdhD_like, Succinate:quinone oxidoreductase (SQR) Type A subfamily, Succinate dehydrogenase D (SdhD)-like subunit; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol	NA|131aa|down_9|NC_014960.1_3045799_3046192_-	cd03501, SQR_TypeA_SdhC_like, Succinate:quinone oxidoreductase (SQR) Type A subfamily, Succinate dehydrogenase C (SdhC)-like subunit; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol
GCF_000199675.1_ASM19967v1	NC_014960	Anaerolinea thermophila UNI-1, complete genome	8	3137389-3146252	8,4,7	CRISPRCasFinder,CRT,PILER-CR	no	cas4,cas2,cas1,cas6,cas3,cas5,cas7,cas8b2,csx15,csx1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	Type III-B,Type III-A,Type III-D,Type III-C	GTTTCAGTATCCACTAACGGATCGAGGGGGGTGCAAC,GTTTCAGTATCCACTAACGGATCGAGGGGG,GTTTCAGTATCCACTAACGGATCGAGGGGGGTGCAAC	37,30,37	0	0	NA	NA	NA:NA:NA	120,120,116	120	TypeIII-B,TypeIII-A,TypeIII-D,TypeIII-C	csa3,cas4,cas2,cas1,cas7,cas8c,cas5,cas3,DinG,DEDDh,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx15,cas6,cas8b2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7	NA,NA	NA|85aa|up_9|NC_014960.1_3123685_3123940_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|598aa|up_8|NC_014960.1_3124027_3125821_+	cd01115, SLC13_permease, Permease SLC13 (solute carrier 13)	NA|299aa|up_7|NC_014960.1_3125851_3126748_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|336aa|up_6|NC_014960.1_3126936_3127944_-	PRK07565, PRK07565, dihydroorotate dehydrogenase-like protein	NA|1191aa|up_5|NC_014960.1_3128023_3131596_-	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric	NA|768aa|up_4|NC_014960.1_3131820_3134124_-	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|270aa|up_3|NC_014960.1_3134292_3135102_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|87aa|up_2|NC_014960.1_3135269_3135530_+	pfam04232, SpoVS, Stage V sporulation protein S (SpoVS)	NA|219aa|up_1|NC_014960.1_3135545_3136202_-	cd01673, dNK, Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to yield corresponding monophosphates (dNMPs)	NA|247aa|up_0|NC_014960.1_3136256_3136997_-	pfam13462, Thioredoxin_4, Thioredoxin	cas4|204aa|down_0|NC_014960.1_3146401_3147013_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas2|91aa|down_1|NC_014960.1_3147016_3147289_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|350aa|down_2|NC_014960.1_3147299_3148349_-	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	cas6|330aa|down_3|NC_014960.1_3148361_3149351_-	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6	cas3|801aa|down_4|NC_014960.1_3149350_3151753_-	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas5|240aa|down_5|NC_014960.1_3151734_3152454_-	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	cas7|360aa|down_6|NC_014960.1_3152468_3153548_-	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP	cas8b2|490aa|down_7|NC_014960.1_3153569_3155039_-	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	csx15|128aa|down_8|NC_014960.1_3155065_3155449_-	cd09766, Csx15_I-U, CRISPR/Cas system-associated protein Csx15	csx1|302aa|down_9|NC_014960.1_3155458_3156364_-	pfam09002, DUF1887, Domain of unknown function (DUF1887)
