assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000203935.1_ASM20393v1	NC_008577	Shewanella sp. ANA-3 chromosome 1, complete sequence	1	692920-693022	1	CRISPRCasFinder	no	DEDDh	csa3,cas3,DEDDh,DinG,WYL,cas6f,cas7f,cas5f	Unclear	AATTATGCGACATTAGCTCAGTTG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,WYL,cas6f,cas7f,cas5f,cas14j	NA,NA	NA|64aa|up_9|NC_008577.1_681447_681639_-	cd19945, Fer2_BFD, bacterioferritin-associated ferredoxin (BFD) [2Fe-2S]-binding domain	NA|525aa|up_8|NC_008577.1_681887_683462_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|311aa|up_7|NC_008577.1_683606_684539_-	cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase	NA|112aa|up_6|NC_008577.1_684629_684965_+	pfam11872, DUF3392, Protein of unknown function (DUF3392)	NA|241aa|up_5|NC_008577.1_684988_685711_-	cd08556, GDPD, Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins	NA|1068aa|up_4|NC_008577.1_685726_688930_-	PRK10929, PRK10929, putative mechanosensitive channel protein; Provisional	NA|295aa|up_3|NC_008577.1_688998_689883_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|293aa|up_2|NC_008577.1_689897_690776_-	PRK00044, psd, phosphatidylserine decarboxylase; Reviewed	NA|355aa|up_1|NC_008577.1_690856_691921_-	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA	DEDDh|182aa|up_0|NC_008577.1_692033_692579_+	PRK05359, PRK05359, oligoribonuclease; Provisional	NA|152aa|down_0|NC_008577.1_693762_694218_+	cd01045, Ferritin_like_AB, Uncharacterized family of ferritin-like proteins found in archaea and bacteria	NA|500aa|down_1|NC_008577.1_694462_695962_+	PRK10565, PRK10565, putative carbohydrate kinase; Provisional	NA|153aa|down_2|NC_008577.1_696041_696500_+	PRK10646, PRK10646, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA|464aa|down_3|NC_008577.1_696508_697900_+	PRK10431, PRK10431, N-acetylmuramoyl-l-alanine amidase II; Provisional	NA|649aa|down_4|NC_008577.1_697913_699860_+	PRK00095, mutL, DNA mismatch repair endonuclease MutL	NA|309aa|down_5|NC_008577.1_699852_700779_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|91aa|down_6|NC_008577.1_700871_701144_+	PRK00395, hfq, RNA-binding protein Hfq; Provisional	NA|436aa|down_7|NC_008577.1_701167_702475_+	PRK11058, PRK11058, GTPase HflX; Provisional	NA|382aa|down_8|NC_008577.1_702511_703657_+	PRK10930, PRK10930, FtsH protease activity modulator HflK	NA|298aa|down_9|NC_008577.1_703660_704554_+	PRK11029, PRK11029, protease modulator HflC
GCF_000203935.1_ASM20393v1	NC_008577	Shewanella sp. ANA-3 chromosome 1, complete sequence	2	4626121-4626448	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f	csa3,cas3,DEDDh,DinG,WYL,cas6f,cas7f,cas5f	Unclear	ATTTTCAGCTGCCTATTCGGCAGGTCAC,ATTTTCAGCTGCCTATTCGGCAGGTCAC,ATTTTCAGCTGCCTATTCGGCAGGTCACA	28,28,29	0	0	NA	NA	NA:NA:NA	5,5,3	5	Unclear	csa3,cas3,DEDDh,DinG,WYL,cas6f,cas7f,cas5f,cas14j	NA|304aa|up_9|NC_008577.1_4613422_4614334_-,NA|311aa|up_6|NC_008577.1_4615506_4616439_+,NA|474aa|down_5|NC_008577.1_4633269_4634691_-,NA|101aa|down_7|NC_008577.1_4635669_4635972_-,NA|174aa|down_9|NC_008577.1_4636743_4637265_+	NA|304aa|up_9|NC_008577.1_4613422_4614334_-	NA	NA|120aa|up_8|NC_008577.1_4614585_4614945_+	COG1553, DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]	NA|134aa|up_7|NC_008577.1_4615049_4615451_+	pfam11756, YgbA_NO, Nitrous oxide-stimulated promoter	NA|311aa|up_6|NC_008577.1_4615506_4616439_+	NA	NA|194aa|up_5|NC_008577.1_4616577_4617159_+	cd11524, SYLF, The SYLF domain (also called DUF500), a novel lipid-binding module	NA|105aa|up_4|NC_008577.1_4617890_4618205_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|362aa|up_3|NC_008577.1_4618876_4619962_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1010aa|up_2|NC_008577.1_4619965_4622995_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|208aa|up_1|NC_008577.1_4623020_4623644_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|380aa|up_0|NC_008577.1_4624561_4625701_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	cas6f|204aa|down_0|NC_008577.1_4626578_4627190_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|350aa|down_1|NC_008577.1_4627191_4628241_-	cd09737, Csy3_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy3	cas5f|702aa|down_2|NC_008577.1_4628250_4630356_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	NA|411aa|down_3|NC_008577.1_4630349_4631582_-	pfam06527, TniQ, TniQ	NA|481aa|down_4|NC_008577.1_4631837_4633280_-	cd04659, Piwi_piwi-like_ProArk, Piwi_piwi-like_ProArk: PIWI domain, Piwi-like subfamily found in Archaea and Bacteria	NA|474aa|down_5|NC_008577.1_4633269_4634691_-	NA	NA|125aa|down_6|NC_008577.1_4634847_4635222_-	pfam14137, DUF4304, Domain of unknown function (DUF4304)	NA|101aa|down_7|NC_008577.1_4635669_4635972_-	NA	NA|104aa|down_8|NC_008577.1_4636212_4636524_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|174aa|down_9|NC_008577.1_4636743_4637265_+	NA
GCF_000203935.1_ASM20393v1	NC_008573	Shewanella sp. ANA-3 plasmid unnamed1, complete sequence	1	141881-141984	1	CRISPRCasFinder	no		cas14j	Orphan	AGATAAATCTTGCTCCGGGACTTCTG	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,WYL,cas6f,cas7f,cas5f,cas14j	NA|84aa|up_9|NC_008573.1_133552_133804_-,NA|88aa|up_8|NC_008573.1_133864_134128_-,NA|181aa|up_7|NC_008573.1_134134_134677_-,NA|95aa|up_3|NC_008573.1_137971_138256_-,NA|133aa|up_2|NC_008573.1_138327_138726_-,NA|240aa|down_0|NC_008573.1_144180_144900_-,NA|164aa|down_1|NC_008573.1_144909_145401_-,NA|96aa|down_3|NC_008573.1_147132_147420_+,NA|297aa|down_7|NC_008573.1_155349_156240_+,NA|170aa|down_8|NC_008573.1_156289_156799_+	NA|84aa|up_9|NC_008573.1_133552_133804_-	NA	NA|88aa|up_8|NC_008573.1_133864_134128_-	NA	NA|181aa|up_7|NC_008573.1_134134_134677_-	NA	NA|453aa|up_6|NC_008573.1_134680_136039_-	cd16430, TraB, TraB is a homolog of VirB10 which forms part of core complex in Type IV secretion system (T4SS)	NA|420aa|up_5|NC_008573.1_136040_137300_-	pfam06586, TraK, TraK protein	NA|219aa|up_4|NC_008573.1_137305_137962_-	pfam05309, TraE, TraE protein	NA|95aa|up_3|NC_008573.1_137971_138256_-	NA	NA|133aa|up_2|NC_008573.1_138327_138726_-	NA	NA|212aa|up_1|NC_008573.1_138840_139476_-	pfam14348, DUF4400, Domain of unknown function (DUF4400)	NA|625aa|up_0|NC_008573.1_139488_141363_-	TIGR03743, SXT_TraD, conjugative coupling factor TraD, SXT/TOL subfamily	NA|240aa|down_0|NC_008573.1_144180_144900_-	NA	NA|164aa|down_1|NC_008573.1_144909_145401_-	NA	NA|356aa|down_2|NC_008573.1_146056_147124_+	TIGR03739, PRTRC_D, PRTRC system protein D	NA|96aa|down_3|NC_008573.1_147132_147420_+	NA	NA|332aa|down_4|NC_008573.1_147518_148514_+	TIGR02740, putative_pilus_assembly_and_synthesis_protein, TraF-like protein	NA|465aa|down_5|NC_008573.1_148510_149905_+	pfam06122, TraH, Conjugative relaxosome accessory transposon protein	NA|1777aa|down_6|NC_008573.1_149908_155239_+	pfam07916, TraG_N, TraG-like protein, N-terminal region	NA|297aa|down_7|NC_008573.1_155349_156240_+	NA	NA|170aa|down_8|NC_008573.1_156289_156799_+	NA	NA|302aa|down_9|NC_008573.1_156886_157792_-	pfam14882, PHINT_rpt, Phage-integrase repeat unit
