The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_017174	Clostridioides difficile M120, complete genome	4047729	271840	288023	4047729		Synechococcus_phage(23.08%)	14	NA	NA
WP_003420963.1|271840_272353_-	nitroreductase family protein	NA	A0A1V0E011	Clostridioides_phage	87.6	1.7e-83
WP_003420964.1|272802_273279_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.8	3.1e-26
WP_003420966.1|273284_273983_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	43.9	1.5e-45
WP_003420968.1|273994_275362_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.0	1.2e-49
WP_003420970.1|275355_276432_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	42.8	2.9e-64
WP_003420972.1|276425_277019_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	39.9	3.6e-24
WP_003420974.1|277011_278544_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	49.7	2.3e-38
WP_003420976.1|278554_279805_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_041160330.1|279829_283636_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	24.1	1.2e-30
WP_003420980.1|283839_284712_+	dTDP-4-dehydrorhamnose reductase	NA	H9NCE8	Sphingomonas_phage	29.0	3.3e-13
WP_003420981.1|284820_285690_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	61.5	6.2e-97
WP_003420982.1|285738_286296_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	53.6	7.5e-48
WP_003420983.1|286333_287317_+	dTDP-glucose 4,6-dehydratase	NA	A0A291LAD7	Escherichia_phage	47.1	3.8e-79
WP_003420984.1|287354_288023_+	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	46.9	4.1e-24
>prophage 2
NC_017174	Clostridioides difficile M120, complete genome	4047729	423568	473731	4047729	holin,head,tail,capsid,terminase,portal,protease	Erysipelothrix_phage(67.39%)	57	NA	NA
WP_041160337.1|423568_424834_+	LlaJI family restriction endonuclease	NA	Q6DMW8	Streptococcus_phage	40.2	1.8e-84
WP_041160338.1|424882_426079_-	CGNR zinc finger domain-containing protein	NA	NA	NA	NA	NA
WP_071585684.1|426470_427016_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_041160340.1|427128_427338_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041160341.1|427330_427648_+	hypothetical protein	NA	A0A2K5B2A7	Erysipelothrix_phage	57.1	1.9e-19
WP_041160342.1|427644_428772_+	DUF2800 domain-containing protein	NA	A0A2K5B2A8	Erysipelothrix_phage	69.9	2.7e-153
WP_041160343.1|428777_429338_+	DUF2815 family protein	NA	A0A2K5B2A9	Erysipelothrix_phage	73.8	4.1e-70
WP_041160344.1|429334_431269_+	DNA polymerase	NA	A0A2K5B2B0	Erysipelothrix_phage	65.1	4.1e-250
WP_041160345.1|431355_432147_+	phage antirepressor KilAC domain-containing protein	NA	A0A0B5A507	Paenibacillus_phage	50.2	5.8e-70
WP_041160346.1|432150_432570_+	hypothetical protein	NA	A0A2K5B270	Erysipelothrix_phage	50.0	5.3e-38
WP_041160347.1|432566_434912_+	phage-like protein	NA	A0A1W6JQ82	Corynebacterium_phage	47.0	4.8e-213
WP_041160348.1|435169_435451_+	VRR-NUC domain-containing protein	NA	A0A2K5B272	Erysipelothrix_phage	65.6	2.8e-27
WP_041160349.1|435431_436781_+	DEAD/DEAH box helicase	NA	A0A2K5B273	Erysipelothrix_phage	71.8	8.8e-167
WP_041160350.1|436785_437244_+	phage-associated protein	NA	NA	NA	NA	NA
WP_039652074.1|437363_437723_+	HNH endonuclease	NA	A0A2K5B276	Erysipelothrix_phage	65.0	2.6e-41
WP_041160351.1|437835_438387_+|terminase	P27 family phage terminase small subunit	terminase	A0A2K5B277	Erysipelothrix_phage	76.0	8.2e-79
WP_139332468.1|438404_439580_+	methionine adenosyltransferase	NA	A0A2K5B278	Erysipelothrix_phage	78.5	9.6e-178
WP_041160353.1|439560_440805_+	DNA modification methylase	NA	A0A2I4R670	Erysipelothrix_phage	72.1	9.2e-179
WP_033860806.1|440905_441598_+	virulence protein	NA	A0A2K5B280	Erysipelothrix_phage	50.9	7.2e-56
WP_050498512.1|441594_441822_+	DUF4314 domain-containing protein	NA	E4ZFL7	Streptococcus_phage	52.2	2.3e-11
WP_041160354.1|441966_442866_+	amidoligase family protein	NA	A0A2K9V489	Faecalibacterium_phage	41.1	2.4e-51
WP_009052892.1|442903_443365_+	gamma-glutamylcyclotransferase	NA	G3MAQ5	Bacillus_virus	36.9	7.2e-20
WP_009052891.1|443349_443535_+	DUF5049 domain-containing protein	NA	NA	NA	NA	NA
WP_050805490.1|443608_445207_+|terminase	terminase large subunit	terminase	A0A2K5B285	Erysipelothrix_phage	79.8	5.6e-253
WP_041160356.1|445314_445644_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095899805.1|445716_446973_+|portal	phage portal protein	portal	A0A2K5B287	Erysipelothrix_phage	81.1	1.2e-199
WP_041160357.1|446969_447650_+|protease	Clp protease ClpP	protease	A0A2K5B288	Erysipelothrix_phage	64.2	5.5e-77
WP_041160358.1|447661_448861_+|capsid	phage major capsid protein	capsid	A0A2I4R671	Erysipelothrix_phage	74.1	1.4e-171
WP_021401112.1|448876_449095_+	hypothetical protein	NA	A0A2K5B289	Erysipelothrix_phage	62.2	8.6e-16
WP_024400893.1|449112_449421_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2K5B290	Erysipelothrix_phage	83.3	3.6e-44
WP_032507257.1|449424_449760_+|head	phage head closure protein	head	A0A2K5B291	Erysipelothrix_phage	63.1	2.9e-34
WP_021401134.1|449752_450184_+	HK97 gp10 family phage protein	NA	A0A2K5B292	Erysipelothrix_phage	62.9	2.7e-45
WP_024400890.1|450180_450534_+	hypothetical protein	NA	A0A2K5B293	Erysipelothrix_phage	54.5	2.9e-29
WP_021401015.1|450537_451140_+|tail	phage major tail, phi13 family protein	tail	A0A2K5B294	Erysipelothrix_phage	76.0	3.9e-82
WP_009052880.1|451151_451535_+	hypothetical protein	NA	A0A2K5B295	Erysipelothrix_phage	68.3	2.8e-41
WP_041160359.1|451749_454308_+	tape measure protein	NA	A0A2K9V3J7	Faecalibacterium_phage	39.0	4.6e-39
WP_041160360.1|454321_455095_+|tail	phage tail family protein	tail	A0A2I4R672	Erysipelothrix_phage	53.5	2.4e-76
WP_041160361.1|455099_457622_+|tail	phage tail protein	tail	A0A2K5B298	Erysipelothrix_phage	63.4	0.0e+00
WP_021401116.1|457637_457832_+	hypothetical protein	NA	A0A2K5B299	Erysipelothrix_phage	55.4	5.0e-15
WP_041160362.1|457841_458423_+	hypothetical protein	NA	A0A2K5B2A0	Erysipelothrix_phage	54.0	3.8e-50
WP_041160363.1|458419_460891_+	glycosyl hydrolase	NA	A0A2K5B2A1	Erysipelothrix_phage	69.4	0.0e+00
WP_033860798.1|460969_461377_+|holin	phage holin family protein	holin	A0A2K5B2A2	Erysipelothrix_phage	69.6	1.2e-50
WP_033860797.1|461376_462078_+	N-acetylmuramoyl-L-alanine amidase	NA	H7BVK7	unidentified_phage	40.8	4.4e-45
WP_024400884.1|462213_462444_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024400883.1|462496_464062_+	recombinase family protein	NA	A0A2K5B2B2	Erysipelothrix_phage	54.8	2.4e-160
WP_000510187.1|464062_464476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024400882.1|464479_466051_+	recombinase family protein	NA	A0A2K5B2B4	Erysipelothrix_phage	61.1	8.6e-174
WP_000567889.1|466160_466406_+	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_000228166.1|466508_467378_+	nucleotidyltransferase domain-containing protein	NA	A0A1X9I6C9	Streptococcus_phage	95.8	4.3e-159
WP_000662263.1|467358_468093_+	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
WP_002294505.1|468125_468989_+	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	A0A1X9I6F2	Streptococcus_phage	100.0	8.7e-168
WP_002294507.1|469032_469560_+	adenine phosphoribosyltransferase	NA	A0A1X9I6E2	Streptococcus_phage	100.0	1.9e-93
WP_002294509.1|469691_470501_+	ANT(9) family aminoglycoside nucleotidyltransferase Spw	NA	NA	NA	NA	NA
WP_041160365.1|470924_471698_+	replication initiator protein A	NA	A0A2P0VK56	Streptococcus_phage	27.0	8.4e-13
WP_041160366.1|471694_472522_+	ATP-binding protein	NA	H7BWC4	unidentified_phage	40.1	1.4e-42
WP_000606600.1|472514_473000_+	PcfB family protein	NA	NA	NA	NA	NA
WP_041160367.1|472996_473731_+	phage antirepressor KilAC domain-containing protein	NA	A0A2K9V3K3	Faecalibacterium_phage	46.9	2.9e-55
>prophage 3
NC_017174	Clostridioides difficile M120, complete genome	4047729	673332	747396	4047729	coat,transposase,protease,tRNA	Streptococcus_phage(25.0%)	59	NA	NA
WP_003417927.1|673332_674049_+|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003417928.1|674127_675438_+	RsmF rRNA methyltransferase first C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003417931.1|675537_676074_+	signal peptidase I	NA	NA	NA	NA	NA
WP_003417934.1|676239_676776_+	signal peptidase I	NA	NA	NA	NA	NA
WP_003417936.1|676785_677541_+	TIM barrel protein	NA	NA	NA	NA	NA
WP_003417941.1|677614_679282_+	nucleoside kinase	NA	NA	NA	NA	NA
WP_003417962.1|679855_680785_+	glutaminase A	NA	NA	NA	NA	NA
WP_003417965.1|680882_681446_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003417966.1|681928_682765_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.5	2.8e-30
WP_009904956.1|683047_684043_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_009904958.1|684276_684681_-	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA	NA
WP_003417972.1|685438_686353_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_003417974.1|686458_688696_+	ATP-binding protein	NA	A0A2H4UU76	Bodo_saltans_virus	33.7	6.9e-07
WP_003417976.1|688893_689751_+	endonuclease III	NA	NA	NA	NA	NA
WP_003417978.1|689944_690415_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_003417979.1|690449_691298_+	DegV family protein	NA	NA	NA	NA	NA
WP_003417982.1|691585_692590_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_041160395.1|693697_694816_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	52.7	1.4e-109
WP_003417991.1|695864_696626_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003417993.1|696628_697447_+	putative sporulation protein YtxC	NA	NA	NA	NA	NA
WP_003417996.1|697625_698228_+	DUF445 family protein	NA	NA	NA	NA	NA
WP_009904969.1|699020_700940_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	39.9	1.8e-144
WP_003418000.1|701664_702756_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_003418003.1|703103_703301_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003418006.1|703660_705001_+	sensor histidine kinase	NA	X5JAC0	Clostridium_phage	39.7	1.4e-79
WP_009902004.1|705342_705912_-	hydrolase	NA	NA	NA	NA	NA
WP_003421731.1|706072_707323_-	MFS transporter	NA	NA	NA	NA	NA
WP_003418012.1|707331_707565_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003418014.1|707615_708194_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003418016.1|708494_709955_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_003418018.1|710323_710929_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009904978.1|710931_713499_+	pyruvate, phosphate dikinase	NA	A0A1V0SGR7	Hokovirus	39.2	3.5e-47
WP_003418025.1|713758_715843_-	EAL domain-containing protein	NA	G3MA91	Bacillus_virus	26.6	2.9e-07
WP_029158113.1|715890_716772_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_003418032.1|717121_718303_-	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	26.0	6.6e-09
WP_003418035.1|719429_719705_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003418037.1|719724_720012_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003418039.1|720431_722948_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003418041.1|722962_728173_+	50S ribosome-binding GTPase	NA	NA	NA	NA	NA
WP_009904984.1|729070_729259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003418048.1|729428_729869_-	DUF3788 domain-containing protein	NA	NA	NA	NA	NA
WP_003418050.1|730203_731517_+	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	41.5	3.3e-94
WP_003418051.1|731534_732071_+	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	69.7	2.1e-63
WP_003418053.1|732568_732790_+|coat	spore coat associated protein CotJA	coat	NA	NA	NA	NA
WP_003418056.1|732789_733053_+|coat	spore coat protein CotJB	coat	NA	NA	NA	NA
WP_003418062.1|733116_733689_+	manganese catalase family protein	NA	NA	NA	NA	NA
WP_003418064.1|734480_735134_+	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA	NA
WP_003418066.1|735295_735829_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	49.4	5.9e-34
WP_003418069.1|736382_737168_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003418071.1|737631_738045_+	DUF3795 domain-containing protein	NA	NA	NA	NA	NA
WP_009904989.1|738118_738655_+	GrpB family protein	NA	NA	NA	NA	NA
WP_003418075.1|738815_740390_+	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA	NA
WP_003418078.1|741078_741684_-	urea carboxylase-associated family protein	NA	NA	NA	NA	NA
WP_003418080.1|742054_742624_+	GrpB family protein	NA	NA	NA	NA	NA
WP_003418082.1|742960_744235_-	sensor histidine kinase	NA	X5JAC0	Clostridium_phage	23.9	1.4e-12
WP_003418084.1|744528_744705_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170875611.1|744808_745417_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003418086.1|745512_746337_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003418087.1|746502_747396_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 4
NC_017174	Clostridioides difficile M120, complete genome	4047729	1426224	1498681	4047729	plate,transposase,tail,portal,integrase,protease,tRNA	Clostridium_phage(41.38%)	65	1425777:1425795	1500155:1500173
1425777:1425795	attL	TGAAATGGCAAAAAATTTA	NA	NA	NA	NA
WP_003419486.1|1426224_1427130_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_003419488.1|1427259_1428189_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_003419491.1|1428292_1428550_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_003419493.1|1428789_1429635_+	DegV family protein	NA	NA	NA	NA	NA
WP_003419494.1|1429759_1431871_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003419500.1|1432898_1434146_+	insulinase family protein	NA	G3MBJ8	Bacillus_virus	34.9	4.3e-51
WP_003419503.1|1434180_1434426_+	YlmC/YmxH family sporulation protein	NA	NA	NA	NA	NA
WP_003419506.1|1434435_1435659_+	aspartate kinase	NA	NA	NA	NA	NA
WP_009905406.1|1435772_1436507_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	NA	NA	NA	NA
WP_003419521.1|1436629_1439038_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	50.4	3.3e-92
WP_003419524.1|1439040_1440099_+|tRNA	tRNA 2-selenouridine(34) synthase MnmH	tRNA	NA	NA	NA	NA
WP_003419527.1|1440092_1441427_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_009905407.1|1441413_1441956_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_003419530.1|1442222_1443269_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	65.8	7.1e-124
WP_003428216.1|1443444_1444986_+	ribonuclease Y	NA	NA	NA	NA	NA
WP_003419542.1|1445295_1447632_+	diguanylate cyclase	NA	G3MA91	Bacillus_virus	29.8	3.8e-16
WP_041160402.1|1448537_1449656_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	53.0	2.4e-109
WP_003419546.1|1449987_1451769_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_009905409.1|1451848_1452379_-	signal peptidase I	NA	NA	NA	NA	NA
WP_009905410.1|1452418_1453243_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_022615208.1|1453499_1454411_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_003419557.1|1454549_1455995_+	adenylosuccinate lyase	NA	NA	NA	NA	NA
WP_003419561.1|1456294_1456747_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003419570.1|1456965_1458162_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_003419573.1|1458546_1459497_+	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_003419575.1|1459617_1460370_+	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	44.4	1.6e-56
WP_003419578.1|1460461_1461238_-	exonuclease domain-containing protein	NA	NA	NA	NA	NA
WP_003419583.1|1461552_1463451_+	glutamine synthetase	NA	NA	NA	NA	NA
WP_003419591.1|1463578_1464700_-	1,2-diacylglycerol 3-glucosyltransferase	NA	NA	NA	NA	NA
WP_009905416.1|1464898_1465231_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003419595.1|1465217_1466276_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_003419596.1|1466268_1467339_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_003419598.1|1467440_1467977_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009905418.1|1468096_1468804_+	lantibiotic protection ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	49.8	2.3e-57
WP_003419609.1|1469528_1470299_+	lantibiotic immunity ABC transporter MutG family permease subunit	NA	NA	NA	NA	NA
WP_029158131.1|1470432_1471824_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_003419615.1|1471899_1472721_-	pyridoxamine kinase	NA	NA	NA	NA	NA
WP_173362400.1|1472956_1474126_+	amidase domain-containing protein	NA	NA	NA	NA	NA
WP_003419624.1|1474308_1474509_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	66.2	2.7e-16
WP_009889129.1|1474929_1475358_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_009889131.1|1475500_1476256_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_003419636.1|1476956_1477463_-	hypothetical protein	NA	A0A0A8WEK1	Clostridium_phage	67.7	1.1e-56
WP_003419639.1|1477544_1477865_-	XRE family transcriptional regulator	NA	A0A0A8WE28	Clostridium_phage	55.5	9.7e-24
WP_003419641.1|1478033_1478231_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003419643.1|1478334_1478775_+	hypothetical protein	NA	A0A090EUN5	Clostridium_phage	47.9	1.1e-28
WP_003419644.1|1479023_1479467_+	hypothetical protein	NA	A0A1V0DZX9	Clostridioides_phage	36.7	2.0e-19
WP_003419645.1|1479471_1480536_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A0A1V0DZX4	Clostridioides_phage	53.1	5.8e-97
WP_003419646.1|1480549_1480978_+|tail	phage tail tube protein	tail	A0A1V0DZX1	Clostridioides_phage	51.8	2.8e-34
WP_003419647.1|1481091_1481538_+|portal	phage portal protein	portal	A0A090EUD0	Clostridium_phage	36.0	8.2e-13
WP_003419649.1|1481731_1484185_+	hypothetical protein	NA	A0A1V0DZX3	Clostridioides_phage	58.4	1.4e-16
WP_003419651.1|1484184_1484607_+	hypothetical protein	NA	A0A090DBR9	Clostridium_phage	71.1	1.7e-52
WP_003419653.1|1484888_1486418_+	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	81.1	1.3e-243
WP_003419655.1|1486433_1486760_+	DUF2577 domain-containing protein	NA	J9QE86	Clostridium_phage	92.6	3.9e-52
WP_003419656.1|1486759_1487188_+	DUF2634 domain-containing protein	NA	A0A0A8WJ32	Clostridium_phage	81.0	3.7e-63
WP_003419658.1|1487180_1488233_+|plate	baseplate J/gp47 family protein	plate	A0A0A8WFP3	Clostridium_phage	70.4	3.5e-139
WP_003419661.1|1488229_1488928_+	DUF2313 domain-containing protein	NA	A0A090D815	Clostridium_phage	56.9	9.5e-48
WP_003419664.1|1488928_1489915_+|tail	phage tail protein	tail	A0A2H4J039	uncultured_Caudovirales_phage	45.8	7.6e-59
WP_003419666.1|1489936_1495114_+	chromosome condensation regulator	NA	A0A0A8WEY5	Clostridium_phage	27.2	2.6e-81
WP_003419667.1|1495130_1495484_+	hypothetical protein	NA	A0A0A8WJF2	Clostridium_phage	42.1	5.5e-12
WP_003419670.1|1495746_1496007_+	hypothetical protein	NA	E2ELK7	Clostridium_phage	90.6	9.9e-35
WP_003419674.1|1496217_1496673_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003419677.1|1496900_1497320_-	helix-turn-helix transcriptional regulator	NA	S5MUV6	Brevibacillus_phage	35.9	1.6e-05
WP_003419680.1|1497615_1497825_+	helix-turn-helix transcriptional regulator	NA	Q5YAA3	Bacillus_phage	47.2	5.9e-06
WP_009905424.1|1497856_1498066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003419686.1|1498282_1498681_-	helix-turn-helix domain-containing protein	NA	A0A059T669	Listeria_phage	34.5	1.0e-06
1500155:1500173	attR	TAAATTTTTTGCCATTTCA	NA	NA	NA	NA
>prophage 5
NC_017174	Clostridioides difficile M120, complete genome	4047729	1577140	1586869	4047729		Pandoravirus(37.5%)	11	NA	NA
WP_003419873.1|1577140_1577725_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	53.2	2.5e-57
WP_003419875.1|1577726_1579076_+	aminodeoxychorismate synthase component I	NA	S4VNU7	Pandoravirus	41.6	7.7e-38
WP_003419877.1|1579065_1579809_+	aminotransferase class IV	NA	NA	NA	NA	NA
WP_003419879.1|1579842_1580544_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003419881.1|1580569_1581142_+	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	51.6	2.3e-44
WP_003419883.1|1581207_1581999_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	30.0	1.1e-23
WP_022615216.1|1582009_1582375_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_003419886.1|1582367_1582874_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	S4VNV0	Pandoravirus	33.9	4.2e-13
WP_003419887.1|1582854_1583640_+	3-deoxy-7-phosphoheptulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	27.9	1.7e-13
WP_009905444.1|1583894_1585685_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	32.6	1.2e-51
WP_003419891.1|1585702_1586869_+	RNA polymerase sigma factor RpoD	NA	M4SMP8	Cyanophage	36.8	9.6e-37
>prophage 6
NC_017174	Clostridioides difficile M120, complete genome	4047729	2167979	2189215	4047729	integrase	Streptococcus_phage(88.89%)	21	2162667:2162681	2194749:2194763
2162667:2162681	attL	TATCCATATATTTTT	NA	NA	NA	NA
WP_003424208.1|2167979_2168918_-	S8 family peptidase	NA	A0A127AWU5	Bacillus_phage	45.8	2.2e-60
WP_003424210.1|2169431_2170244_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_009905677.1|2170272_2170899_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001291561.1|2171822_2173040_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000814511.1|2173121_2173325_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_000857133.1|2173785_2174016_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000804885.1|2174012_2174435_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_001227347.1|2174939_2175293_+	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000336323.1|2175352_2175520_-	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_041160408.1|2175638_2177558_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A2K5B2A5	Erysipelothrix_phage	95.1	0.0e+00
WP_041160409.1|2177805_2178738_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	87.1	5.2e-150
WP_002324551.1|2178734_2179736_-	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	94.3	1.4e-182
WP_041160410.1|2179732_2181910_-	YtxH domain-containing protein	NA	A0A1S5SF30	Streptococcus_phage	86.2	5.2e-310
WP_000506270.1|2184342_2184849_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000342539.1|2184823_2185321_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_001009056.1|2185437_2185659_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000398284.1|2185701_2186907_-	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_000879507.1|2186929_2187082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813488.1|2187084_2188470_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000985015.1|2188498_2188885_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000420682.1|2188900_2189215_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
2194749:2194763	attR	TATCCATATATTTTT	NA	NA	NA	NA
>prophage 7
NC_017174	Clostridioides difficile M120, complete genome	4047729	3084548	3093500	4047729		Catovirus(50.0%)	8	NA	NA
WP_009906096.1|3084548_3086462_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.8	1.1e-26
WP_003422869.1|3086544_3087636_-	glycosyltransferase	NA	A0A1V0SL50	Klosneuvirus	26.2	1.0e-16
WP_170324422.1|3087641_3088985_-	nucleotide sugar dehydrogenase	NA	A0A127AXI2	Bacillus_phage	43.4	1.1e-89
WP_003422866.1|3088962_3089715_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	40.5	3.5e-16
WP_003422864.1|3089762_3090671_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003422862.1|3090692_3091442_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	38.8	1.2e-16
WP_022615338.1|3091470_3092646_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
WP_009906099.1|3092660_3093500_-	glycosyltransferase family 2 protein	NA	A0A2P1ELT8	Moumouvirus	25.9	1.8e-05
