The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_021006	Streptococcus pneumoniae SPN034156, complete genome	2024476	191347	204244	2024476		Bacillus_phage(22.22%)	12	NA	NA
WP_001152997.1|191347_193816_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	35.5	1.2e-105
WP_000204733.1|194009_194996_+	L-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_000731127.1|195344_196040_-	potassium channel family protein	NA	A0A1B0Y2S3	Lactobacillus_phage	47.7	4.7e-23
WP_001812387.1|196086_196341_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5S8E8	Streptococcus_phage	51.2	7.0e-17
WP_000208080.1|196342_196585_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001289493.1|196675_197485_-	MBL fold metallo-hydrolase	NA	A0A0C5AFC1	Paenibacillus_phage	39.0	1.8e-34
WP_000886210.1|197486_198836_-	cell wall metabolism sensor histidine kinase VicK	NA	W8CYF6	Bacillus_phage	34.6	1.8e-34
WP_000722076.1|198828_199533_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.8	2.8e-39
WP_000886147.1|199587_200763_-	A/G-specific adenine glycosylase	NA	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	29.8	8.8e-22
WP_000845287.1|201091_202762_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
WP_000699489.1|202991_203681_+	phosphopantothenate--cysteine ligase	NA	Q9HH70	Methanothermobacter_phage	31.6	2.9e-17
WP_001284130.1|203692_204244_+	phosphopantothenoylcysteine decarboxylase	NA	A0A1V0S7W6	Shearwaterpox_virus	36.1	5.2e-25
>prophage 2
NC_021006	Streptococcus pneumoniae SPN034156, complete genome	2024476	239961	299638	2024476	holin,protease	Bacillus_phage(21.43%)	59	NA	NA
WP_000411215.1|239961_240831_-|holin	choline kinase LicA	holin	NA	NA	NA	NA
WP_000609885.1|240847_241870_-	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA	NA
WP_000638502.1|241874_242582_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000835915.1|242917_244405_+	type IV teichoic acid flippase TacF	NA	NA	NA	NA	NA
WP_000811874.1|244414_245218_+|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	27.1	5.3e-10
WP_001199652.1|245219_246029_+|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	30.3	9.1e-10
WP_001126438.1|246303_249480_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_000166701.1|249792_250872_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.9	6.3e-59
WP_001293820.1|250921_251845_-	aspartate carbamoyltransferase catalytic subunit	NA	M1HGA5	Paramecium_bursaria_Chlorella_virus	31.7	6.7e-25
WP_000850024.1|251863_252385_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
WP_000603771.1|252595_253225_-	endonuclease III	NA	NA	NA	NA	NA
WP_000773233.1|253224_253767_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_000389608.1|253936_254254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041179029.1|254492_256052_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A1B0RXA0	Streptococcus_phage	25.5	2.1e-26
WP_000895724.1|256200_257100_-|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
WP_000219827.1|257101_257662_-	LemA family protein	NA	A0A1X9IGG1	Lactococcus_phage	32.5	8.8e-12
WP_000801941.1|257755_258469_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
WP_001809228.1|258722_260006_+	uracil transporter	NA	Q9KX94	Enterobacteria_phage	35.3	1.8e-60
WP_000863637.1|260200_261772_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_000402059.1|261783_262116_-	putative DNA-binding protein	NA	NA	NA	NA	NA
WP_000702356.1|262205_262583_-	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_001003495.1|262654_263959_+	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	35.1	7.5e-30
WP_000023531.1|263971_264778_+	sugar-phosphatase	NA	NA	NA	NA	NA
WP_001068669.1|264945_265293_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_015511344.1|265411_265741_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	37.8	6.3e-10
WP_000712092.1|265734_266109_-	fluoride efflux transporter CrcB	NA	NA	NA	NA	NA
WP_000362440.1|266105_266372_-	chorismate mutase	NA	NA	NA	NA	NA
WP_001162128.1|266487_266931_-	flavodoxin	NA	A7KUZ7	Bacillus_phage	37.4	1.6e-08
WP_000401770.1|267034_267970_+	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA	NA
WP_001808393.1|268023_268308_+	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_000028151.1|268364_268583_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000199536.1|269691_271038_+	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_000711943.1|271533_271704_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000941987.1|274655_274952_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000869751.1|275109_275397_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000807141.1|276190_276328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000945309.1|276460_277780_-	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_000356590.1|277782_278523_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	1.0e-23
WP_000656069.1|278537_279158_-	ATP-binding cassette domain-containing protein	NA	A0A076FI99	Aureococcus_anophage	31.8	6.1e-14
WP_001058017.1|279341_280745_-	phosphotransferase	NA	NA	NA	NA	NA
WP_000821274.1|281373_281961_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000840776.1|281963_282197_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000566553.1|282209_282590_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001814249.1|282582_282906_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001168347.1|283167_283338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196960.1|283524_283893_-	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_001287278.1|283968_284469_-	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_000862484.1|284718_285978_-	TRZ/ATZ family protein	NA	NA	NA	NA	NA
WP_000828831.1|286234_287983_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.3	3.7e-48
WP_000681689.1|287984_289709_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.0	3.0e-42
WP_000818203.1|289766_290705_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_000692438.1|290954_291824_-	homoserine kinase	NA	NA	NA	NA	NA
WP_000216376.1|291825_293112_-	homoserine dehydrogenase	NA	NA	NA	NA	NA
WP_000782676.1|293262_294000_-	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000461498.1|294199_295234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000565097.1|295262_296696_-	O-antigen polysaccharide polymerase Wzy family protein	NA	NA	NA	NA	NA
WP_000446977.1|296711_297698_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000225903.1|297699_298803_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_001061988.1|298792_299638_-|holin	phosphorylcholine transferase LicD	holin	NA	NA	NA	NA
>prophage 3
NC_021006	Streptococcus pneumoniae SPN034156, complete genome	2024476	343369	399458	2024476	tRNA,holin,transposase	Bacillus_virus(17.65%)	55	NA	NA
WP_001090165.1|343369_344398_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_074017658.1|346765_347893_-	G5 domain-containing protein	NA	NA	NA	NA	NA
WP_000835659.1|348607_349159_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000058033.1|349508_350333_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	57.5	1.8e-74
WP_000283156.1|350329_351790_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	43.5	3.9e-104
WP_000797184.1|351905_352394_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001107505.1|352383_352593_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000640911.1|352977_353430_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000773444.1|353493_353706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001809119.1|355570_355882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000169079.1|355896_357183_-	U32 family peptidase	NA	Q6DW11	Phage_TP	31.3	1.6e-40
WP_001262531.1|357806_357989_+	ApaLI family restriction endonuclease	NA	NA	NA	NA	NA
WP_078131890.1|357998_358352_+	ApaLI family restriction endonuclease	NA	NA	NA	NA	NA
WP_000122904.1|360063_361056_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000708373.1|361215_362970_+	ABC transporter ATP-binding protein	NA	F2Y352	Organic_Lake_phycodnavirus	32.6	1.3e-24
WP_000657837.1|362953_364675_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.9	4.9e-29
WP_000368971.1|364685_365270_+	MptD family putative ECF transporter S component	NA	NA	NA	NA	NA
WP_001141943.1|365269_365965_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000229369.1|365952_367317_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	35.5	3.3e-20
WP_001809122.1|367771_367930_-|transposase	transposase domain-containing protein	transposase	NA	NA	NA	NA
WP_001809123.1|368522_368735_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000484480.1|368743_369049_-|transposase	IS66 family transposase zinc-finger binding domain-containing protein	transposase	NA	NA	NA	NA
WP_000691853.1|369035_369230_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_014632422.1|369426_369750_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_001136125.1|369655_369916_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000065723.1|370219_371782_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.8	1.4e-19
WP_000936189.1|371923_372622_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000872215.1|373571_374507_-	serine hydrolase	NA	NA	NA	NA	NA
WP_001102214.1|374503_375229_-	proteinase	NA	NA	NA	NA	NA
WP_000290648.1|375312_375948_-|holin	1-alkyl-2-acetylglycerophosphocholine esterase	holin	A0A2K9L661	Tupanvirus	28.2	4.3e-07
WP_000972925.1|375949_376777_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_001272961.1|378376_378988_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	4.9e-16
WP_000855734.1|379032_379761_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000272311.1|379798_380710_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.5	2.9e-89
WP_000926599.1|380775_381000_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_000590985.1|381077_381821_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.0	1.6e-29
WP_001103449.1|381820_382621_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_000889093.1|382778_383135_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	57.3	1.2e-33
WP_001170344.1|383128_383659_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	54.3	1.4e-46
WP_000405832.1|383658_384153_-	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	52.1	1.9e-42
WP_000858730.1|384287_384734_+	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
WP_001097984.1|384730_385378_+	hemolysin III family protein	NA	NA	NA	NA	NA
WP_000689948.1|385398_385980_-	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA	NA
WP_000138517.1|385980_386856_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA	NA
WP_000036789.1|387007_388387_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000175417.1|388680_389604_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_000915924.1|389663_390269_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	54.2	7.7e-54
WP_000673687.1|390287_391532_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	52.1	2.2e-55
WP_000371287.1|391754_392012_-	DUF896 family protein	NA	NA	NA	NA	NA
WP_000164753.1|392053_394090_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_000038744.1|394349_395267_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_000429569.1|395461_396223_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001099678.1|396495_397338_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	40.2	1.3e-51
WP_042672207.1|397451_398843_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_001809132.1|399077_399458_-|transposase	PD-(D/E)XK nuclease family transposase	transposase	NA	NA	NA	NA
>prophage 4
NC_021006	Streptococcus pneumoniae SPN034156, complete genome	2024476	1085999	1151917	2024476	tRNA,head,protease,terminase,portal,integrase,capsid	Streptococcus_phage(76.09%)	70	1131782:1131802	1164597:1164617
WP_000510412.1|1085999_1086839_-	energy-coupling factor transporter ATPase	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.3e-16
WP_000835717.1|1086823_1087651_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	32.9	3.6e-22
WP_000712132.1|1087647_1088193_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001227958.1|1088203_1089025_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000170209.1|1089066_1090350_-	insulinase family protein	NA	A0A167R9K4	Powai_lake_megavirus	30.0	3.5e-16
WP_000424280.1|1090346_1091597_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	42.3	2.0e-93
WP_000455903.1|1091755_1092124_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	57.3	7.0e-18
WP_000266667.1|1092126_1093224_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_000073428.1|1093274_1094753_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	2.2e-94
WP_000165444.1|1094904_1095930_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000958764.1|1096135_1097758_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	26.4	4.0e-49
WP_000834652.1|1097819_1100372_+	YfhO family protein	NA	NA	NA	NA	NA
WP_001809069.1|1100472_1100787_-	membrane protein	NA	NA	NA	NA	NA
WP_000763197.1|1100814_1101153_-	membrane protein	NA	NA	NA	NA	NA
WP_000579428.1|1101237_1102005_-	YhgE/Pip domain-containing protein	NA	NA	NA	NA	NA
WP_001158266.1|1102183_1102726_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000866065.1|1102968_1103721_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_015511364.1|1103717_1105043_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000799689.1|1105063_1105189_-	competence-stimulating peptide ComC	NA	NA	NA	NA	NA
WP_000695929.1|1105471_1105951_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_000681597.1|1106133_1107315_+	trypsin-like peptidase domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	26.1	1.5e-16
WP_000410383.1|1107372_1108131_+	ParB/RepB/Spo0J family partition protein	NA	S5VTK0	Leptospira_phage	32.5	6.7e-15
WP_000660615.1|1108343_1109705_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_000581155.1|1109863_1111000_+	DNA polymerase III subunit beta	NA	A0A1L2BX73	Bacteriophage	26.3	1.9e-13
WP_000285194.1|1111064_1111259_+	DUF951 family protein	NA	NA	NA	NA	NA
WP_001218707.1|1111342_1112458_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_000163932.1|1112528_1113098_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_000258091.1|1113098_1116608_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_001234978.1|1116665_1116932_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
WP_000041909.1|1116924_1117293_+	septum formation initiator family protein	NA	NA	NA	NA	NA
WP_001224760.1|1117412_1118681_+	serine hydrolase	NA	NA	NA	NA	NA
WP_001208986.1|1118677_1119955_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_000892185.1|1119958_1120501_+	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	26.2	4.4e-08
WP_000744554.1|1120516_1122475_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	H8ZJI5	Ostreococcus_tauri_virus	45.8	3.2e-109
WP_000588860.1|1122596_1123076_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000939546.1|1129933_1130170_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000205044.1|1130400_1131687_+	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	37.1	2.7e-72
1131782:1131802	attL	CTTTTTCATAATAATCTCCCT	NA	NA	NA	NA
WP_000876732.1|1131928_1133077_-|integrase	site-specific integrase	integrase	A0A1S5SEH2	Streptococcus_phage	100.0	1.6e-217
WP_000122591.1|1133262_1134186_-	3'-5' exoribonuclease	NA	A0A1S5SEW3	Streptococcus_phage	100.0	3.5e-175
WP_000136459.1|1134198_1134582_-	hypothetical protein	NA	A0A1S5SEU6	Streptococcus_phage	100.0	1.9e-66
WP_000492031.1|1134594_1134960_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SEP7	Streptococcus_phage	100.0	3.2e-63
WP_000041097.1|1135336_1135558_-	hypothetical protein	NA	A0A1S5SEP1	Streptococcus_phage	100.0	2.1e-30
WP_000389576.1|1135676_1135823_+	hypothetical protein	NA	A0A1S5SEU4	Streptococcus_phage	100.0	3.6e-18
WP_000032097.1|1135834_1136038_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SEI7	Streptococcus_phage	100.0	7.7e-27
WP_001057654.1|1136054_1136252_+	hypothetical protein	NA	A0A1S5SEL5	Streptococcus_phage	100.0	3.6e-29
WP_001002946.1|1136262_1136424_+	hypothetical protein	NA	A0A1S5SEJ3	Streptococcus_phage	100.0	1.3e-21
WP_000386249.1|1136418_1136844_-	hypothetical protein	NA	A0A1S5SEI2	Streptococcus_phage	100.0	4.4e-40
WP_001002359.1|1136897_1137608_+	ORF6C domain-containing protein	NA	A0A1S5SEX2	Streptococcus_phage	100.0	1.1e-133
WP_000370959.1|1137621_1137879_+	hypothetical protein	NA	A0A1S5SEV6	Streptococcus_phage	100.0	1.2e-43
WP_000462824.1|1137964_1138285_+	hypothetical protein	NA	A0A1S5SEQ7	Streptococcus_phage	100.0	4.3e-48
WP_000391805.1|1138300_1138597_+	hypothetical protein	NA	A0A1S5SEL7	Streptococcus_phage	100.0	5.2e-48
WP_001289771.1|1138589_1139396_+	phage replisome organizer N-terminal domain-containing protein	NA	A0A1S5SEQ1	Streptococcus_phage	100.0	6.5e-125
WP_000470307.1|1140319_1140514_+	hypothetical protein	NA	A0A1S5SEM5	Streptococcus_phage	100.0	1.8e-28
WP_000891962.1|1140513_1140732_+	hypothetical protein	NA	A0A1S5SEK3	Streptococcus_phage	100.0	1.6e-38
WP_000233203.1|1141225_1141393_+	hypothetical protein	NA	A0A1S5SEY3	Streptococcus_phage	100.0	5.0e-24
WP_000969665.1|1141560_1141878_+	hypothetical protein	NA	A0A1S5SER7	Streptococcus_phage	100.0	3.5e-58
WP_000736390.1|1142130_1142532_+	transcriptional activator	NA	A0A1S5SER4	Streptococcus_phage	100.0	4.7e-68
WP_000282427.1|1143639_1143960_+	HNH endonuclease	NA	A0A141E0N9	Streptococcus_phage	100.0	2.7e-58
WP_001118283.1|1144096_1144489_+|terminase	P27 family phage terminase small subunit	terminase	A0A1S5SEN5	Streptococcus_phage	100.0	1.6e-65
WP_001002923.1|1146220_1146439_+	hypothetical protein	NA	A0A1S5SEK2	Streptococcus_phage	100.0	1.3e-32
WP_000510803.1|1146456_1147659_+|portal	phage portal protein	portal	A0A1S5SF08	Streptococcus_phage	100.0	5.2e-227
WP_001172115.1|1147642_1148218_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1S5SEX0	Streptococcus_phage	100.0	2.2e-103
WP_001030357.1|1148214_1149381_+|capsid	phage major capsid protein	capsid	A0A1S5SES9	Streptococcus_phage	100.0	6.0e-188
WP_000262606.1|1149392_1149662_+	hypothetical protein	NA	A0A1S5SEN8	Streptococcus_phage	100.0	2.7e-43
WP_000370976.1|1149664_1149946_+	hypothetical protein	NA	A0A1S5SES4	Streptococcus_phage	100.0	2.5e-44
WP_000267055.1|1149932_1150232_+|head	phage head closure protein	head	A0A1S5SEX5	Streptococcus_phage	100.0	3.7e-49
WP_000063886.1|1150228_1150576_+	HK97 gp10 family phage protein	NA	A0A1S5SEL8	Streptococcus_phage	100.0	8.8e-47
WP_000777003.1|1150572_1150896_+	hypothetical protein	NA	A0A1S5SEP5	Streptococcus_phage	100.0	3.5e-53
WP_000191279.1|1150907_1151486_+	hypothetical protein	NA	A0A1S5SEM2	Streptococcus_phage	100.0	2.6e-107
WP_001227146.1|1151497_1151917_+	hypothetical protein	NA	A0A1S5SEL1	Streptococcus_phage	100.0	1.1e-72
1164597:1164617	attR	CTTTTTCATAATAATCTCCCT	NA	NA	NA	NA
>prophage 5
NC_021006	Streptococcus pneumoniae SPN034156, complete genome	2024476	1161448	1165799	2024476	holin	Streptococcus_phage(85.71%)	8	NA	NA
WP_001091113.1|1161448_1161652_+	hypothetical protein	NA	A0A1S5SET3	Streptococcus_phage	100.0	5.0e-26
WP_000852241.1|1161654_1162005_+	hypothetical protein	NA	A0A1S5SEY6	Streptococcus_phage	100.0	2.8e-64
WP_001165344.1|1162013_1162430_+|holin	phage holin family protein	holin	A0A1S5SCE8	Streptococcus_phage	100.0	1.9e-67
WP_001186219.1|1162433_1162766_+|holin	phage holin	holin	A0A1S5SEQ5	Streptococcus_phage	100.0	7.7e-40
WP_000350505.1|1162769_1163726_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	A0A1S5SEN2	Streptococcus_phage	100.0	6.7e-145
WP_000109850.1|1163946_1164135_-	hypothetical protein	NA	A0A0A0YQQ9	Streptococcus_phage	83.9	8.2e-23
WP_000291870.1|1164702_1165170_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_000701992.1|1165355_1165799_+	dUTP diphosphatase	NA	Q2WG49	Clostridium_botulinum_D_phage	47.3	2.1e-29
>prophage 6
NC_021006	Streptococcus pneumoniae SPN034156, complete genome	2024476	1244424	1282088	2024476	tRNA,protease,bacteriocin	Streptococcus_phage(28.57%)	35	NA	NA
WP_001230165.1|1244424_1244712_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000724258.1|1244763_1246872_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000571329.1|1246868_1247510_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.3	3.3e-23
WP_001038474.1|1247716_1248523_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000031925.1|1248539_1249736_+	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_001268172.1|1250872_1251736_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000424479.1|1252372_1252735_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088776440.1|1252752_1252962_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001835915.1|1253118_1254177_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001841427.1|1254491_1255469_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424417.1|1255845_1256220_+|bacteriocin	SPH_0224 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000619744.1|1256427_1257330_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424436.1|1257385_1257739_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001066694.1|1257735_1258464_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000770311.1|1259595_1259835_+	hypothetical protein	NA	M1Q0Z8	Streptococcus_phage	52.7	8.0e-15
WP_001868551.1|1259819_1260098_+	hypothetical protein	NA	M1Q0Z8	Streptococcus_phage	51.6	2.3e-21
WP_001035340.1|1260383_1262282_+	pneumococcal surface protein A	NA	NA	NA	NA	NA
WP_001282985.1|1262682_1263804_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000193629.1|1263944_1264400_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000220953.1|1264409_1266323_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_000331980.1|1266674_1268354_-	ribonuclease J	NA	S0A5H7	Cellulophaga_phage	29.9	1.5e-06
WP_000639589.1|1268355_1268589_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_000282479.1|1268868_1269084_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000974047.1|1269406_1269559_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	bacteriocin	NA	NA	NA	NA
WP_000180803.1|1269560_1269746_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibA	bacteriocin	NA	NA	NA	NA
WP_000865708.1|1269923_1270607_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_000569827.1|1270603_1271041_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_000655068.1|1271030_1272041_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	44.1	1.3e-61
WP_000375712.1|1274399_1275353_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000288039.1|1275362_1276979_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.3	3.9e-20
WP_001290272.1|1277239_1277668_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001017603.1|1278440_1279613_+	nucleotide sugar dehydrogenase	NA	O41091	Paramecium_bursaria_Chlorella_virus	43.8	4.6e-79
WP_000570721.1|1280008_1280872_+	MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000933470.1|1281157_1281355_+	peptide pheromone VP1	NA	NA	NA	NA	NA
WP_000720788.1|1281422_1282088_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 7
NC_021006	Streptococcus pneumoniae SPN034156, complete genome	2024476	1438374	1485355	2024476	holin,protease,transposase,integrase	Streptococcus_phage(27.27%)	36	1483245:1483258	1486827:1486840
WP_001063431.1|1438374_1440480_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	37.4	1.7e-116
WP_000032550.1|1440775_1441258_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_000743630.1|1441352_1442837_-	DUF1846 domain-containing protein	NA	NA	NA	NA	NA
WP_001156819.1|1442988_1444596_+	alpha-glucosidase	NA	NA	NA	NA	NA
WP_001022221.1|1444754_1444928_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000664175.1|1447573_1448266_+	capsular polysaccharide biosynthesis protein CpsC	NA	A0A1X9I5E1	Streptococcus_phage	56.8	3.2e-64
WP_000684066.1|1449834_1451019_+	nucleotide sugar dehydrogenase	NA	O41091	Paramecium_bursaria_Chlorella_virus	52.2	2.1e-103
WP_000287927.1|1451034_1452288_+	glycosyltransferase	NA	Q84419	Paramecium_bursaria_Chlorella_virus	25.6	6.1e-13
WP_000756065.1|1452585_1453506_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	50.2	5.9e-74
WP_001808869.1|1453502_1454720_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	86.2	1.5e-194
WP_024266168.1|1454646_1455204_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	45.4	2.4e-38
WP_001032502.1|1456592_1461896_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
WP_001040010.1|1462061_1464221_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_000248781.1|1464217_1464814_-	Holliday junction resolvase RecU	NA	R9TMF8	Paenibacillus_phage	37.2	9.6e-25
WP_000179549.1|1464879_1465407_+	DUF1273 domain-containing protein	NA	NA	NA	NA	NA
WP_000146522.1|1465476_1465806_+	cell division regulator GpsB	NA	NA	NA	NA	NA
WP_000711393.1|1466291_1467449_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_000039274.1|1467461_1468856_+	mid-cell-anchored protein MapZ	NA	NA	NA	NA	NA
WP_000158781.1|1468931_1470356_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	29.6	1.6e-41
WP_000518011.1|1470367_1471057_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	26.1	2.2e-12
WP_000771086.1|1471155_1472178_+|holin	choline-binding protein CbpC	holin	NA	NA	NA	NA
WP_000771140.1|1472196_1473318_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	NA	NA	NA	NA
WP_000765691.1|1473435_1474668_-	MFS transporter	NA	NA	NA	NA	NA
WP_074017684.1|1474710_1475673_-	lanthionine synthetase	NA	NA	NA	NA	NA
WP_000197317.1|1476196_1476526_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000163328.1|1476647_1477526_+	mevalonate kinase	NA	NA	NA	NA	NA
WP_000373456.1|1477507_1478461_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
WP_000562427.1|1478447_1479455_+	phosphomevalonate kinase	NA	NA	NA	NA	NA
WP_000210616.1|1479438_1480449_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_001224637.1|1480526_1481225_+	cell wall-active antibiotics response protein	NA	NA	NA	NA	NA
WP_000743662.1|1481221_1482217_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000698438.1|1482230_1482863_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001808881.1|1482863_1483106_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
WP_075588398.1|1483030_1483342_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
1483245:1483258	attL	AAATAATCTTAATA	NA	NA	NA	NA
WP_000754507.1|1483782_1484697_+|protease	serine protease	protease	NA	NA	NA	NA
WP_000378120.1|1484995_1485355_+|integrase	tyrosine-type recombinase/integrase	integrase	C9E2L6	Enterococcus_phage	41.0	2.4e-18
1486827:1486840	attR	AAATAATCTTAATA	NA	NA	NA	NA
>prophage 8
NC_021006	Streptococcus pneumoniae SPN034156, complete genome	2024476	1950628	1961024	2024476	holin	Streptococcus_phage(70.0%)	11	NA	NA
WP_001025729.1|1950628_1951537_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	27.7	5.2e-06
WP_000745389.1|1951533_1951995_+	signal peptidase II	NA	NA	NA	NA	NA
WP_000403195.1|1951984_1952872_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	28.0	1.3e-09
WP_000728259.1|1952874_1954758_+|holin	phosphorylcholine esterase CbpE	holin	I2E8W4	Clostridium_phage	25.2	1.4e-13
WP_074017610.1|1954837_1955968_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	58.4	1.9e-114
WP_000254674.1|1955977_1957240_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	64.0	7.2e-139
WP_000689706.1|1957243_1958041_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	50.2	8.0e-59
WP_000033362.1|1958260_1958899_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	68.1	9.8e-76
WP_000806707.1|1958895_1959786_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	51.0	5.4e-72
WP_000358228.1|1959825_1960143_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.9e-28
WP_001166884.1|1960145_1961024_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.4	8.7e-115
