assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000214155.1_ASM21415v1	NC_015576	Mycolicibacter sinensis, complete sequence	1	69319-69527	1	CRISPRCasFinder	no		cas3,csa3,DinG,DEDDh,WYL,csb1gr7	Orphan	TGGGCGTGCTGGTGCCGCCGGGTGT	25	0	0	NA	NA	NA	3	3	Orphan	cas3,csa3,DinG,DEDDh,WYL,csb1gr7	NA|122aa|up_4|NC_015576.1_65393_65759_+,NA|162aa|up_3|NC_015576.1_65905_66391_+,NA|174aa|up_2|NC_015576.1_66387_66909_+,NA|159aa|down_1|NC_015576.1_70490_70967_-	NA|398aa|up_9|NC_015576.1_56796_57990_-	pfam00823, PPE, PPE family	NA|101aa|up_8|NC_015576.1_57993_58296_-	pfam00934, PE, PE family	NA|1404aa|up_7|NC_015576.1_58400_62612_-	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|500aa|up_6|NC_015576.1_62616_64116_-	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|357aa|up_5|NC_015576.1_64230_65301_+	pfam10774, DUF4226, Domain of unknown function (DUF4226)	NA|122aa|up_4|NC_015576.1_65393_65759_+	NA	NA|162aa|up_3|NC_015576.1_65905_66391_+	NA	NA|174aa|up_2|NC_015576.1_66387_66909_+	NA	NA|321aa|up_1|NC_015576.1_66989_67952_-	pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal	NA|233aa|up_0|NC_015576.1_67948_68647_-	pfam18645, DUF5631, Family of unknown function (DUF5631)	NA|116aa|down_0|NC_015576.1_69620_69968_+	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional	NA|159aa|down_1|NC_015576.1_70490_70967_-	NA	NA|162aa|down_2|NC_015576.1_71151_71637_-	pfam14534, DUF4440, Domain of unknown function (DUF4440)	NA|559aa|down_3|NC_015576.1_71682_73359_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|118aa|down_4|NC_015576.1_73470_73824_-	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|43aa|down_5|NC_015576.1_73895_74024_-	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|204aa|down_6|NC_015576.1_74226_74838_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|373aa|down_7|NC_015576.1_74841_75960_-	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites	NA|487aa|down_8|NC_015576.1_76018_77479_-	cd16018, Enpp, Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin	NA|487aa|down_9|NC_015576.1_77485_78946_-	cd16018, Enpp, Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin
GCF_000214155.1_ASM21415v1	NC_015576	Mycolicibacter sinensis, complete sequence	2	69634-69784	2	CRISPRCasFinder	no		cas3,csa3,DinG,DEDDh,WYL,csb1gr7	Orphan	TGGGCGTGCTGGTGCCGCCGGGTGT	25	1	1	69659-69681	NC_015576.1_69611-69633	NA	2	2	Orphan	cas3,csa3,DinG,DEDDh,WYL,csb1gr7	NA|122aa|up_4|NC_015576.1_65393_65759_+,NA|162aa|up_3|NC_015576.1_65905_66391_+,NA|174aa|up_2|NC_015576.1_66387_66909_+,NA|159aa|down_0|NC_015576.1_70490_70967_-	NA|398aa|up_9|NC_015576.1_56796_57990_-	pfam00823, PPE, PPE family	NA|101aa|up_8|NC_015576.1_57993_58296_-	pfam00934, PE, PE family	NA|1404aa|up_7|NC_015576.1_58400_62612_-	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|500aa|up_6|NC_015576.1_62616_64116_-	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|357aa|up_5|NC_015576.1_64230_65301_+	pfam10774, DUF4226, Domain of unknown function (DUF4226)	NA|122aa|up_4|NC_015576.1_65393_65759_+	NA	NA|162aa|up_3|NC_015576.1_65905_66391_+	NA	NA|174aa|up_2|NC_015576.1_66387_66909_+	NA	NA|321aa|up_1|NC_015576.1_66989_67952_-	pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal	NA|233aa|up_0|NC_015576.1_67948_68647_-	pfam18645, DUF5631, Family of unknown function (DUF5631)	NA|159aa|down_0|NC_015576.1_70490_70967_-	NA	NA|162aa|down_1|NC_015576.1_71151_71637_-	pfam14534, DUF4440, Domain of unknown function (DUF4440)	NA|559aa|down_2|NC_015576.1_71682_73359_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|118aa|down_3|NC_015576.1_73470_73824_-	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|43aa|down_4|NC_015576.1_73895_74024_-	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|204aa|down_5|NC_015576.1_74226_74838_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|373aa|down_6|NC_015576.1_74841_75960_-	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites	NA|487aa|down_7|NC_015576.1_76018_77479_-	cd16018, Enpp, Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin	NA|487aa|down_8|NC_015576.1_77485_78946_-	cd16018, Enpp, Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin	NA|350aa|down_9|NC_015576.1_79108_80158_-	pfam13810, DUF4185, Domain of unknown function (DUF4185)
GCF_000214155.1_ASM21415v1	NC_015576	Mycolicibacter sinensis, complete sequence	3	225027-225107	3	CRISPRCasFinder	no		cas3,csa3,DinG,DEDDh,WYL,csb1gr7	Orphan	TGGCCGCCTGCGCCGCCCGGCTGG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,DEDDh,WYL,csb1gr7	NA,NA|47aa|down_4|NC_015576.1_232656_232797_-,NA|66aa|down_5|NC_015576.1_232917_233115_+	NA|186aa|up_9|NC_015576.1_215600_216158_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|443aa|up_8|NC_015576.1_216204_217533_-	pfam09995, DUF2236, Uncharacterized protein conserved in bacteria (DUF2236)	NA|192aa|up_7|NC_015576.1_217628_218204_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|326aa|up_6|NC_015576.1_218218_219196_-	pfam02126, PTE, Phosphotriesterase family	NA|153aa|up_5|NC_015576.1_219250_219709_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|366aa|up_4|NC_015576.1_219861_220959_+	TIGR04036, family_protein, putative luciferase-like monooxygenase, FMN-dependent, CE1758 family	NA|201aa|up_3|NC_015576.1_221183_221786_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|228aa|up_2|NC_015576.1_221876_222560_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|314aa|up_1|NC_015576.1_222556_223498_+	PRK08326, PRK08326, R2-like ligand-binding oxidase	NA|460aa|up_0|NC_015576.1_223510_224890_-	PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed	NA|1426aa|down_0|NC_015576.1_226010_230288_-	pfam11847, DUF3367, Domain of unknown function (DUF3367)	NA|58aa|down_1|NC_015576.1_230337_230511_-	pfam11021, DUF2613, Protein of unknown function (DUF2613)	NA|396aa|down_2|NC_015576.1_230699_231887_+	pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain	NA|209aa|down_3|NC_015576.1_231964_232591_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|47aa|down_4|NC_015576.1_232656_232797_-	NA	NA|66aa|down_5|NC_015576.1_232917_233115_+	NA	NA|281aa|down_6|NC_015576.1_233131_233974_-	pfam01575, MaoC_dehydratas, MaoC like domain	NA|455aa|down_7|NC_015576.1_233975_235340_-	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|491aa|down_8|NC_015576.1_235365_236838_+	PRK09268, PRK09268, acetyl-CoA C-acetyltransferase	NA|238aa|down_9|NC_015576.1_237010_237724_-	cd03139, GATase1_PfpI_2, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus
GCF_000214155.1_ASM21415v1	NC_015576	Mycolicibacter sinensis, complete sequence	4	346527-346651	4	CRISPRCasFinder	no		cas3,csa3,DinG,DEDDh,WYL,csb1gr7	Orphan	CCCGGACGCTTGGCCCCACCGGCCATCCCCAGCCCCTT	38	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,DEDDh,WYL,csb1gr7	NA|286aa|up_8|NC_015576.1_336381_337239_-,NA|120aa|up_2|NC_015576.1_343289_343649_+,NA|61aa|down_4|NC_015576.1_351673_351856_-	NA|274aa|up_9|NC_015576.1_335563_336385_+	cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16	NA|286aa|up_8|NC_015576.1_336381_337239_-	NA	NA|236aa|up_7|NC_015576.1_337323_338031_-	PTZ00146, PTZ00146, fibrillarin; Provisional	NA|191aa|up_6|NC_015576.1_338545_339118_+	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed	NA|469aa|up_5|NC_015576.1_339271_340678_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|576aa|up_4|NC_015576.1_340744_342472_+	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional	NA|253aa|up_3|NC_015576.1_342501_343260_+	TIGR03083, TIGR03083, uncharacterized Actinobacterial protein TIGR03083	NA|120aa|up_2|NC_015576.1_343289_343649_+	NA	NA|289aa|up_1|NC_015576.1_343680_344547_+	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form	NA|435aa|up_0|NC_015576.1_344802_346107_-	PRK09265, PRK09265, aminotransferase AlaT; Validated	NA|193aa|down_0|NC_015576.1_349213_349792_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|124aa|down_1|NC_015576.1_349859_350231_-	pfam11255, DUF3054, Protein of unknown function (DUF3054)	NA|221aa|down_2|NC_015576.1_350253_350916_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|177aa|down_3|NC_015576.1_350963_351494_-	PRK14971, PRK14971, DNA polymerase III subunit gamma/tau	NA|61aa|down_4|NC_015576.1_351673_351856_-	NA	NA|494aa|down_5|NC_015576.1_351888_353370_-	PRK15049, PRK15049, L-asparagine permease	NA|434aa|down_6|NC_015576.1_353499_354801_+	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|616aa|down_7|NC_015576.1_354949_356797_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|210aa|down_8|NC_015576.1_356793_357423_+	PRK14142, PRK14142, heat shock protein GrpE; Provisional	NA|400aa|down_9|NC_015576.1_357446_358646_+	PRK14279, PRK14279, molecular chaperone DnaJ
GCF_000214155.1_ASM21415v1	NC_015576	Mycolicibacter sinensis, complete sequence	5	1423320-1423528	5	CRISPRCasFinder	no	DinG	cas3,csa3,DinG,DEDDh,WYL,csb1gr7	Type IV-A	CTCGCCTCCGCCAACCCTTCGGGCCAACTCCGGCGAGCCTCGCTGAACCGC	51	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,DEDDh,WYL,csb1gr7	NA,NA	NA|502aa|up_9|NC_015576.1_1409414_1410920_-	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair]	NA|425aa|up_8|NC_015576.1_1411014_1412289_+	pfam04960, Glutaminase, Glutaminase	NA|535aa|up_7|NC_015576.1_1412295_1413900_-	cd07302, CHD, cyclase homology domain	NA|224aa|up_6|NC_015576.1_1413946_1414618_+	PRK03298, PRK03298, endonuclease NucS	NA|365aa|up_5|NC_015576.1_1414672_1415767_+	cd04747, OYE_like_5_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 5	NA|165aa|up_4|NC_015576.1_1416071_1416566_-	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	NA|394aa|up_3|NC_015576.1_1416648_1417830_+	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|298aa|up_2|NC_015576.1_1417976_1418870_+	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones]	NA|741aa|up_1|NC_015576.1_1418927_1421150_-	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|682aa|up_0|NC_015576.1_1421155_1423201_-	cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins	NA|860aa|down_0|NC_015576.1_1423545_1426125_+	cd04299, GT35_Glycogen_Phosphorylase-like, proteins similar to glycogen phosphorylase	NA|480aa|down_1|NC_015576.1_1426204_1427644_-	COG2321, COG2321, Predicted metalloprotease [General function prediction only]	DinG|698aa|down_2|NC_015576.1_1427664_1429758_-	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|89aa|down_3|NC_015576.1_1429818_1430085_+	pfam13376, OmdA, Bacteriocin-protection, YdeI or OmpD-Associated	NA|81aa|down_4|NC_015576.1_1430131_1430374_+	COG4226, HicB, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|126aa|down_5|NC_015576.1_1430370_1430748_+	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs	NA|423aa|down_6|NC_015576.1_1430749_1432018_-	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated	NA|105aa|down_7|NC_015576.1_1432127_1432442_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|199aa|down_8|NC_015576.1_1432473_1433070_+	pfam09438, DUF2017, Domain of unknown function (DUF2017)	NA|363aa|down_9|NC_015576.1_1433066_1434155_+	cd02252, nylC_like, nylC-like family; composed of proteins with similarity to Flavobacterium endo-type 6-aminohexanoate-oligomer hydrolase (EIII), the product of the nylon oligomer degradation gene, nylC
GCF_000214155.1_ASM21415v1	NC_015576	Mycolicibacter sinensis, complete sequence	6	1428375-1428454	6	CRISPRCasFinder	no	DinG	cas3,csa3,DinG,DEDDh,WYL,csb1gr7	Type IV-A	CGTCGAGCCTCGCTGAACCGCGG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,DEDDh,WYL,csb1gr7	NA,NA	NA|535aa|up_9|NC_015576.1_1412295_1413900_-	cd07302, CHD, cyclase homology domain	NA|224aa|up_8|NC_015576.1_1413946_1414618_+	PRK03298, PRK03298, endonuclease NucS	NA|365aa|up_7|NC_015576.1_1414672_1415767_+	cd04747, OYE_like_5_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 5	NA|165aa|up_6|NC_015576.1_1416071_1416566_-	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	NA|394aa|up_5|NC_015576.1_1416648_1417830_+	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|298aa|up_4|NC_015576.1_1417976_1418870_+	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones]	NA|741aa|up_3|NC_015576.1_1418927_1421150_-	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|682aa|up_2|NC_015576.1_1421155_1423201_-	cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins	NA|860aa|up_1|NC_015576.1_1423545_1426125_+	cd04299, GT35_Glycogen_Phosphorylase-like, proteins similar to glycogen phosphorylase	NA|480aa|up_0|NC_015576.1_1426204_1427644_-	COG2321, COG2321, Predicted metalloprotease [General function prediction only]	NA|89aa|down_0|NC_015576.1_1429818_1430085_+	pfam13376, OmdA, Bacteriocin-protection, YdeI or OmpD-Associated	NA|81aa|down_1|NC_015576.1_1430131_1430374_+	COG4226, HicB, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|126aa|down_2|NC_015576.1_1430370_1430748_+	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs	NA|423aa|down_3|NC_015576.1_1430749_1432018_-	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated	NA|105aa|down_4|NC_015576.1_1432127_1432442_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|199aa|down_5|NC_015576.1_1432473_1433070_+	pfam09438, DUF2017, Domain of unknown function (DUF2017)	NA|363aa|down_6|NC_015576.1_1433066_1434155_+	cd02252, nylC_like, nylC-like family; composed of proteins with similarity to Flavobacterium endo-type 6-aminohexanoate-oligomer hydrolase (EIII), the product of the nylon oligomer degradation gene, nylC	NA|218aa|down_7|NC_015576.1_1434162_1434816_+	pfam01694, Rhomboid, Rhomboid family	NA|269aa|down_8|NC_015576.1_1434812_1435619_+	PRK00865, PRK00865, glutamate racemase; Provisional	NA|259aa|down_9|NC_015576.1_1435698_1436475_+	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain
GCF_000214155.1_ASM21415v1	NC_015576	Mycolicibacter sinensis, complete sequence	7	3120343-3120428	7	CRISPRCasFinder	no		cas3,csa3,DinG,DEDDh,WYL,csb1gr7	Orphan	CTCTCCTTCGTCGAGCCTCGCTGAACCGC	29	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,DEDDh,WYL,csb1gr7	NA,NA	NA|340aa|up_9|NC_015576.1_3108077_3109097_-	COG3480, SdrC, Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms]	NA|448aa|up_8|NC_015576.1_3109198_3110542_+	pfam10103, Zincin_2, Zincin-like metallopeptidase	NA|287aa|up_7|NC_015576.1_3110551_3111412_-	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|290aa|up_6|NC_015576.1_3111709_3112579_+	TIGR03882, hypothetical_protein, bacteriocin biosynthesis cyclodehydratase domain	NA|454aa|up_5|NC_015576.1_3112636_3113998_+	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|89aa|up_4|NC_015576.1_3114014_3114281_-	pfam02467, Whib, Transcription factor WhiB	NA|711aa|up_3|NC_015576.1_3114593_3116726_-	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|87aa|up_2|NC_015576.1_3116801_3117062_+	TIGR02200, conserved_hypothetical_protein, Glutaredoxin-like protein	NA|305aa|up_1|NC_015576.1_3117136_3118051_-	PRK00241, nudC, NAD(+) diphosphatase	NA|359aa|up_0|NC_015576.1_3118047_3119124_-	pfam02254, TrkA_N, TrkA-N domain	NA|1045aa|down_0|NC_015576.1_3122561_3125696_-	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|280aa|down_1|NC_015576.1_3125702_3126542_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|99aa|down_2|NC_015576.1_3126552_3126849_+	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]	NA|285aa|down_3|NC_015576.1_3126863_3127718_-	TIGR02569, conserved_hypothetical_protein, TIGR02569 family protein	NA|393aa|down_4|NC_015576.1_3127826_3129005_-	PRK07878, PRK07878, molybdopterin biosynthesis-like protein MoeZ; Validated	NA|345aa|down_5|NC_015576.1_3129115_3130150_-	pfam11350, DUF3152, Protein of unknown function (DUF3152)	NA|229aa|down_6|NC_015576.1_3130353_3131040_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|86aa|down_7|NC_015576.1_3131055_3131313_-	pfam11305, DUF3107, Protein of unknown function (DUF3107)	NA|232aa|down_8|NC_015576.1_3131413_3132109_-	pfam13794, MiaE_2, tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like	NA|509aa|down_9|NC_015576.1_3132353_3133880_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]
GCF_000214155.1_ASM21415v1	NC_015576	Mycolicibacter sinensis, complete sequence	8	3522883-3523095	1	PILER-CR	no		cas3,csa3,DinG,DEDDh,WYL,csb1gr7	Orphan	GCCGCCGTTGCCGCCGGTGCCGCCGACCCCGCCGTCGCCACC	42	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,DinG,DEDDh,WYL,csb1gr7	NA,NA|70aa|down_1|NC_015576.1_3529506_3529716_+	NA|263aa|up_9|NC_015576.1_3509600_3510389_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|184aa|up_8|NC_015576.1_3510389_3510941_-	PRK00279, adk, adenylate kinase; Reviewed	NA|444aa|up_7|NC_015576.1_3510937_3512269_-	PRK09204, secY, preprotein translocase subunit SecY; Reviewed	NA|311aa|up_6|NC_015576.1_3512578_3513511_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|303aa|up_5|NC_015576.1_3513516_3514425_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|411aa|up_4|NC_015576.1_3514475_3515708_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|102aa|up_3|NC_015576.1_3515758_3516064_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|598aa|up_2|NC_015576.1_3516150_3517944_-	TIGR00705, Protease_4, signal peptide peptidase SppA, 67K type	NA|464aa|up_1|NC_015576.1_3518002_3519394_-	pfam00823, PPE, PPE family	NA|83aa|up_0|NC_015576.1_3519785_3520034_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|1616aa|down_0|NC_015576.1_3524457_3529305_+	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau	NA|70aa|down_1|NC_015576.1_3529506_3529716_+	NA	NA|148aa|down_2|NC_015576.1_3530197_3530641_-	PRK05592, rplO, 50S ribosomal protein L15; Reviewed	NA|63aa|down_3|NC_015576.1_3530640_3530829_-	PRK05611, rpmD, 50S ribosomal protein L30; Reviewed	NA|232aa|down_4|NC_015576.1_3530831_3531527_-	PRK00550, rpsE, 30S ribosomal protein S5; Validated	NA|136aa|down_5|NC_015576.1_3531573_3531981_-	PRK05593, rplR, 50S ribosomal protein L18; Reviewed	NA|180aa|down_6|NC_015576.1_3531983_3532523_-	PRK05498, rplF, 50S ribosomal protein L6; Validated	NA|133aa|down_7|NC_015576.1_3532536_3532935_-	PRK00136, rpsH, 30S ribosomal protein S8; Validated	NA|62aa|down_8|NC_015576.1_3532954_3533140_-	PRK08061, rpsN, type Z 30S ribosomal protein S14	NA|188aa|down_9|NC_015576.1_3533144_3533708_-	PRK00010, rplE, 50S ribosomal protein L5; Validated
GCF_000214155.1_ASM21415v1	NC_015576	Mycolicibacter sinensis, complete sequence	9	4154868-4154947	8	CRISPRCasFinder	no		cas3,csa3,DinG,DEDDh,WYL,csb1gr7	Orphan	CCGACGAAGGAGAGCCGAAGCTG	23	1	9	4154891-4154924|4154891-4154924|4154891-4154924|4154891-4154924|4154891-4154924|4154891-4154924|4154891-4154924|4154891-4154924|4154891-4154924	NC_015576.1_1547582-1547549|NC_015576.1_1653967-1653934|NC_015576.1_1654024-1653991|NC_015576.1_3167109-3167076|NC_015576.1_3167166-3167133|NC_015576.1_1037488-1037521|NC_015576.1_1826869-1826836|NC_015576.1_2125357-2125324|NC_015576.1_3167052-3167019	NA	1	1	Orphan	cas3,csa3,DinG,DEDDh,WYL,csb1gr7	NA,NA|57aa|down_0|NC_015576.1_4155043_4155214_+,NA|596aa|down_3|NC_015576.1_4160866_4162654_+	NA|214aa|up_9|NC_015576.1_4145355_4145997_-	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|324aa|up_8|NC_015576.1_4146007_4146979_-	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]	NA|346aa|up_7|NC_015576.1_4146957_4147995_-	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated	NA|459aa|up_6|NC_015576.1_4147991_4149368_-	TIGR00666, D-alanyl-D-alanine_carboxypeptidase_DacB, D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family	NA|163aa|up_5|NC_015576.1_4149448_4149937_+	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase	NA|229aa|up_4|NC_015576.1_4150102_4150789_-	pfam13305, WHG, WHG domain	NA|146aa|up_3|NC_015576.1_4150897_4151335_+	TIGR00026, Hypothetical_protein_Rv1261c/MT1299/Mb1292c	NA|332aa|up_2|NC_015576.1_4151323_4152319_-	TIGR03718, R_switched_Alx, integral membrane protein, TerC family	NA|422aa|up_1|NC_015576.1_4152411_4153677_+	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|230aa|up_0|NC_015576.1_4153812_4154502_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|57aa|down_0|NC_015576.1_4155043_4155214_+	NA	NA|1506aa|down_1|NC_015576.1_4155226_4159744_-	cd07539, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporters	NA|315aa|down_2|NC_015576.1_4159889_4160834_-	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|596aa|down_3|NC_015576.1_4160866_4162654_+	NA	NA|1306aa|down_4|NC_015576.1_4162703_4166621_+	TIGR02353, NON-RIBOSOMAL_PEPTIDE_SYNTHETASE, non-ribosomal peptide synthetase terminal domain of unknown function	NA|452aa|down_5|NC_015576.1_4166617_4167973_+	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|422aa|down_6|NC_015576.1_4168086_4169352_+	pfam00823, PPE, PPE family	NA|100aa|down_7|NC_015576.1_4169375_4169675_+	pfam00934, PE, PE family	NA|398aa|down_8|NC_015576.1_4169692_4170886_+	pfam00823, PPE, PPE family	NA|254aa|down_9|NC_015576.1_4170916_4171678_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_000214155.1_ASM21415v1	NC_015576	Mycolicibacter sinensis, complete sequence	10	4193344-4193555	9	CRISPRCasFinder	no	cas3	cas3,csa3,DinG,DEDDh,WYL,csb1gr7	Unclear	CCCCCGGGCCGGTGGAGGTGAGGCGAAGCCGGGACCGACGCAGGAACCGGGG	52	1	1	4193396-4193503	NC_015576.1_4193317-4193424	NA	1	1	Unclear	cas3,csa3,DinG,DEDDh,WYL,csb1gr7	NA|249aa|up_0|NC_015576.1_4192546_4193293_-,NA|216aa|down_0|NC_015576.1_4195587_4196235_-,NA|47aa|down_7|NC_015576.1_4201433_4201574_+	cas3|785aa|up_9|NC_015576.1_4182555_4184910_+	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|344aa|up_8|NC_015576.1_4185210_4186242_+	pfam18621, DUF5628, Family of unknown function (DUF5628)	NA|223aa|up_7|NC_015576.1_4186238_4186907_-	TIGR03816, tadE_like_DECH, helicase/secretion neighborhood TadE-like protein	NA|55aa|up_6|NC_015576.1_4186941_4187106_-	pfam14029, DUF4244, Protein of unknown function (DUF4244)	NA|195aa|up_5|NC_015576.1_4187225_4187810_-	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|267aa|up_4|NC_015576.1_4187806_4188607_-	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion]	NA|392aa|up_3|NC_015576.1_4188603_4189779_-	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|344aa|up_2|NC_015576.1_4189775_4190807_-	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|286aa|up_1|NC_015576.1_4191270_4192128_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|249aa|up_0|NC_015576.1_4192546_4193293_-	NA	NA|216aa|down_0|NC_015576.1_4195587_4196235_-	NA	NA|189aa|down_1|NC_015576.1_4196456_4197023_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|318aa|down_2|NC_015576.1_4197022_4197976_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_3|NC_015576.1_4198002_4199196_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|228aa|down_4|NC_015576.1_4199192_4199876_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|206aa|down_5|NC_015576.1_4199980_4200598_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|254aa|down_6|NC_015576.1_4200620_4201382_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|47aa|down_7|NC_015576.1_4201433_4201574_+	NA	NA|225aa|down_8|NC_015576.1_4201680_4202355_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|260aa|down_9|NC_015576.1_4202425_4203205_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain
