assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000214235.1_ASM21423v1	NC_015567	Serratia plymuthica AS9, complete sequence	1	501284-501672	1,1,1	PILER-CR,CRT,CRISPRCasFinder	no		DEDDh,WYL,DinG,csa3,cas3,Cas9_archaeal	Orphan	GTGCACTGCCGTACAGGCAGCTTAGAAA,GTNCACTGCCGTANAGGCAGCTTAGAAA,CACTGCCGTACAGGCAGCTTAGAAA	28,28,25	1	1	501312-501343	NC_015567.1_3632945-3632976	I-F:I-F:I-F	5,6,6	6	Orphan	DEDDh,WYL,DinG,csa3,cas3,Cas9_archaeal	NA|68aa|up_5|NC_015567.1_497402_497606_+,NA	NA|380aa|up_9|NC_015567.1_493540_494680_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|212aa|up_8|NC_015567.1_494695_495331_-	PRK11552, PRK11552, putative DNA-binding transcriptional regulator; Provisional	NA|419aa|up_7|NC_015567.1_495361_496618_-	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|123aa|up_6|NC_015567.1_496987_497356_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|68aa|up_5|NC_015567.1_497402_497606_+	NA	NA|293aa|up_4|NC_015567.1_497675_498554_-	PRK15447, PRK15447, putative protease; Provisional	NA|332aa|up_3|NC_015567.1_498565_499561_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|174aa|up_2|NC_015567.1_499788_500310_+	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism]	NA|168aa|up_1|NC_015567.1_500303_500807_+	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|101aa|up_0|NC_015567.1_500793_501096_-	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated	NA|145aa|down_0|NC_015567.1_502430_502865_+	PRK03467, PRK03467, hypothetical protein; Provisional	NA|213aa|down_1|NC_015567.1_502913_503552_+	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs	NA|261aa|down_2|NC_015567.1_503502_504285_-	PRK11244, phnP, carbon-phosphorus lyase complex accessory protein; Provisional	NA|201aa|down_3|NC_015567.1_504298_504901_-	TIGR03308, phn_thr-fam, phosphonate metabolism protein, transferase hexapeptide repeat family	NA|190aa|down_4|NC_015567.1_504897_505467_-	PRK10078, PRK10078, ribose 1,5-bisphosphokinase; Provisional	NA|379aa|down_5|NC_015567.1_505466_506603_-	PRK15446, PRK15446, phosphonate metabolism protein PhnM; Provisional	NA|235aa|down_6|NC_015567.1_506602_507307_-	COG4778, PhnL, ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|263aa|down_7|NC_015567.1_507326_508115_-	PRK11701, phnK, phosphonate C-P lyase system protein PhnK; Provisional	NA|287aa|down_8|NC_015567.1_508114_508975_-	COG3627, PhnJ, Uncharacterized enzyme of phosphonate metabolism [Inorganic ion transport and metabolism]	NA|362aa|down_9|NC_015567.1_508967_510053_-	COG3626, PhnI, Uncharacterized enzyme of phosphonate metabolism [Inorganic ion transport and metabolism]
GCF_000214235.1_ASM21423v1	NC_015567	Serratia plymuthica AS9, complete sequence	2	1369709-1370082	2	CRISPRCasFinder	no		DEDDh,WYL,DinG,csa3,cas3,Cas9_archaeal	Orphan	GCTGCCGACGCCGAGAAGAAAGC	23	1	2	1369831-1369849|1369831-1369849	NC_015567.1_1925491-1925509|NC_015567.1_3083410-3083392	NA	7	7	Orphan	DEDDh,WYL,DinG,csa3,cas3,Cas9_archaeal	NA,NA	NA|389aa|up_9|NC_015567.1_1359607_1360774_+	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|291aa|up_8|NC_015567.1_1360773_1361646_+	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|633aa|up_7|NC_015567.1_1361711_1363610_-	PRK09419, PRK09419, multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase/5'-nucleotidase	NA|523aa|up_6|NC_015567.1_1364293_1365862_+	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA	NA|380aa|up_5|NC_015567.1_1365876_1367016_+	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II	NA|38aa|up_4|NC_015567.1_1367033_1367147_+	COG4890, COG4890, Predicted outer membrane lipoprotein [Function unknown]	NA|99aa|up_3|NC_015567.1_1367146_1367443_+	PRK10588, PRK10588, hypothetical protein; Provisional	NA|135aa|up_2|NC_015567.1_1367573_1367978_+	PRK10800, PRK10800, acyl-CoA thioesterase YbgC; Provisional	NA|228aa|up_1|NC_015567.1_1367974_1368658_+	PRK10801, PRK10801, Tol-Pal system protein TolQ	NA|143aa|up_0|NC_015567.1_1368670_1369099_+	PRK11024, PRK11024, colicin uptake protein TolR; Provisional	NA|431aa|down_0|NC_015567.1_1370651_1371944_+	PRK03629, tolB, Tol-Pal system protein TolB	NA|172aa|down_1|NC_015567.1_1371988_1372504_+	PRK10802, PRK10802, peptidoglycan-associated lipoprotein Pal	NA|266aa|down_2|NC_015567.1_1372513_1373311_+	PRK10803, PRK10803, tol-pal system protein YbgF; Provisional	NA|354aa|down_3|NC_015567.1_1374727_1375789_+	PRK09375, PRK09375, quinolinate synthase NadA	NA|242aa|down_4|NC_015567.1_1375815_1376541_+	PRK15397, PRK15397, nicotinamide riboside transporter PnuC; Provisional	NA|321aa|down_5|NC_015567.1_1376578_1377541_-	PRK03557, PRK03557, CDF family zinc transporter ZitB	NA|1072aa|down_6|NC_015567.1_1377540_1380756_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|202aa|down_7|NC_015567.1_1380752_1381358_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|351aa|down_8|NC_015567.1_1381564_1382617_+	PRK09261, PRK09261, phospho-2-dehydro-3-deoxyheptonate aldolase; Validated	NA|251aa|down_9|NC_015567.1_1382697_1383450_-	PRK14115, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
GCF_000214235.1_ASM21423v1	NC_015567	Serratia plymuthica AS9, complete sequence	3	1797634-1797769	3	CRISPRCasFinder	no		DEDDh,WYL,DinG,csa3,cas3,Cas9_archaeal	Orphan	AAGCCTTGCAGGAAGCGGCGCTGCGTCAGGCGTTTGCCGA	40	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,DinG,csa3,cas3,Cas9_archaeal	NA,NA	NA|107aa|up_9|NC_015567.1_1784582_1784903_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|760aa|up_8|NC_015567.1_1784930_1787210_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|73aa|up_7|NC_015567.1_1787425_1787644_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|242aa|up_6|NC_015567.1_1787750_1788476_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|583aa|up_5|NC_015567.1_1788494_1790243_-	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|589aa|up_4|NC_015567.1_1790245_1792012_-	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|206aa|up_3|NC_015567.1_1792189_1792807_-	PRK10542, PRK10542, glutathionine S-transferase; Provisional	NA|296aa|up_2|NC_015567.1_1792903_1793791_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|324aa|up_1|NC_015567.1_1793869_1794841_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|165aa|up_0|NC_015567.1_1795511_1796006_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|204aa|down_0|NC_015567.1_1799898_1800510_+	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|448aa|down_1|NC_015567.1_1800517_1801861_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|431aa|down_2|NC_015567.1_1801970_1803263_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|204aa|down_3|NC_015567.1_1803322_1803934_-	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|264aa|down_4|NC_015567.1_1804032_1804824_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|123aa|down_5|NC_015567.1_1804863_1805232_-	pfam08818, DUF1801, Domain of unknown function (DU1801)	NA|382aa|down_6|NC_015567.1_1805409_1806555_+	PRK03633, PRK03633, putative MFS family transporter protein; Provisional	NA|247aa|down_7|NC_015567.1_1806603_1807344_-	PRK11145, pflA, pyruvate formate lyase 1-activating protein	NA|761aa|down_8|NC_015567.1_1807648_1809931_-	cd01678, PFL1, Pyruvate formate lyase 1	NA|287aa|down_9|NC_015567.1_1809985_1810846_-	PRK10805, PRK10805, formate transporter; Provisional
GCF_000214235.1_ASM21423v1	NC_015567	Serratia plymuthica AS9, complete sequence	4	4175124-4175330	2	CRT	no	WYL	DEDDh,WYL,DinG,csa3,cas3,Cas9_archaeal	Unclear	TTTGTGGTGTTTTTTAGCNGCCTG	24	0	0	NA	NA	NA	4	4	Orphan	DEDDh,WYL,DinG,csa3,cas3,Cas9_archaeal	NA,NA|97aa|down_8|NC_015567.1_4182485_4182776_-	NA|138aa|up_9|NC_015567.1_4166761_4167175_+	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|113aa|up_8|NC_015567.1_4167370_4167709_+	pfam04899, MbeD_MobD, MbeD/MobD like	NA|149aa|up_7|NC_015567.1_4167775_4168222_+	pfam06711, DUF1198, Protein of unknown function (DUF1198)	NA|113aa|up_6|NC_015567.1_4168252_4168591_-	PRK10556, PRK10556, hypothetical protein; Provisional	NA|397aa|up_5|NC_015567.1_4168693_4169884_-	PRK05122, PRK05122, major facilitator superfamily transporter; Provisional	NA|338aa|up_4|NC_015567.1_4169979_4170993_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|346aa|up_3|NC_015567.1_4171138_4172176_+	COG4188, COG4188, Predicted dienelactone hydrolase [General function prediction only]	NA|299aa|up_2|NC_015567.1_4172135_4173032_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|461aa|up_1|NC_015567.1_4173137_4174520_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|127aa|up_0|NC_015567.1_4174516_4174897_+	COG4460, COG4460, Uncharacterized protein conserved in bacteria [Function unknown]	NA|103aa|down_0|NC_015567.1_4175781_4176090_+	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]	NA|479aa|down_1|NC_015567.1_4176153_4177590_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|144aa|down_2|NC_015567.1_4177687_4178119_+	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|79aa|down_3|NC_015567.1_4178400_4178637_+	TIGR02194, Glutaredoxin-like_protein_NrdH, Glutaredoxin-like protein NrdH	NA|135aa|down_4|NC_015567.1_4178645_4179050_+	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA|715aa|down_5|NC_015567.1_4179031_4181176_+	PRK08188, PRK08188, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|324aa|down_6|NC_015567.1_4181185_4182157_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|92aa|down_7|NC_015567.1_4182213_4182489_-	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|97aa|down_8|NC_015567.1_4182485_4182776_-	NA	NA|66aa|down_9|NC_015567.1_4182853_4183051_-	pfam06945, DUF1289, Protein of unknown function (DUF1289)
