assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000214435.1_ASM21443v1	NC_015565	Desulfotomaculum nigrificans CO-1-SRB, complete sequence	1	584618-587190	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	cas3,Cas14b_CAS-V-F,RT,cas14j,csa3,cas5,cas8c,cas7,cas4,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csx1,WYL,cas6,cas8b2,DinG,DEDDh	Type I-U,Type I-C, Type I-U?	GTCGCGCCCCACACGGGCGCGTGGATTGAAAC,GTCGCGCCCCACACGGGCGCGTGGATTGAAAC,GTCGCGCCCCACACGGGCGCGTGGATTGAAAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	38,38,38	38	TypeI-U?,TypeI-C,TypeI-U	cas3,Cas14b_CAS-V-F,RT,cas14j,csa3,cas5,cas8c,cas7,cas4,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csx1,WYL,cas6,cas8b2,DinG,DEDDh	NA,NA|173aa|down_2|NC_015565.1_592764_593283_+,NA|168aa|down_3|NC_015565.1_593436_593940_+	NA|230aa|up_9|NC_015565.1_573562_574252_+	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|281aa|up_8|NC_015565.1_574292_575135_-	TIGR02869, Spore_cortex-lytic_enzyme, spore cortex-lytic enzyme	NA|316aa|up_7|NC_015565.1_575429_576377_+	cd05292, LDH_2, A subgroup of L-lactate dehydrogenases	cas3|729aa|up_6|NC_015565.1_576845_579032_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|219aa|up_5|NC_015565.1_579058_579715_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|593aa|up_4|NC_015565.1_579711_581490_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|295aa|up_3|NC_015565.1_581505_582390_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|229aa|up_2|NC_015565.1_582409_583096_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas1|344aa|up_1|NC_015565.1_583100_584132_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NC_015565.1_584146_584437_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|530aa|down_0|NC_015565.1_587315_588905_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|260aa|down_1|NC_015565.1_588901_589681_+	PRK06526, PRK06526, transposase; Provisional	NA|173aa|down_2|NC_015565.1_592764_593283_+	NA	NA|168aa|down_3|NC_015565.1_593436_593940_+	NA	NA|696aa|down_4|NC_015565.1_594426_596514_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|584aa|down_5|NC_015565.1_599350_601102_+	pfam02538, Hydantoinase_B, Hydantoinase B/oxoprolinase	NA|112aa|down_6|NC_015565.1_601103_601439_+	pfam07883, Cupin_2, Cupin domain	NA|369aa|down_7|NC_015565.1_601508_602615_+	cd01092, APP-like, Similar to Prolidase and Aminopeptidase P	NA|450aa|down_8|NC_015565.1_602635_603985_+	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|210aa|down_9|NC_015565.1_604133_604763_+	COG2928, COG2928, Uncharacterized conserved protein [Function unknown]
GCF_000214435.1_ASM21443v1	NC_015565	Desulfotomaculum nigrificans CO-1-SRB, complete sequence	2	589883-592441	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	cas3,Cas14b_CAS-V-F,RT,cas14j,csa3,cas5,cas8c,cas7,cas4,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csx1,WYL,cas6,cas8b2,DinG,DEDDh	Type I-U,Type I-C, Type I-U?	GTCGCGCCCCACACGGGCGCGTGGATTGAAAC,GTCGCGCCCCACACGGGCGCGTGGATTGAAAC,GTCGCGCCCCACACGGGCGCGTGGATTGAAAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	38,38,38	38	TypeI-U?,TypeI-C,TypeI-U	cas3,Cas14b_CAS-V-F,RT,cas14j,csa3,cas5,cas8c,cas7,cas4,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csx1,WYL,cas6,cas8b2,DinG,DEDDh	NA,NA|173aa|down_0|NC_015565.1_592764_593283_+,NA|168aa|down_1|NC_015565.1_593436_593940_+	NA|316aa|up_9|NC_015565.1_575429_576377_+	cd05292, LDH_2, A subgroup of L-lactate dehydrogenases	cas3|729aa|up_8|NC_015565.1_576845_579032_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|219aa|up_7|NC_015565.1_579058_579715_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|593aa|up_6|NC_015565.1_579711_581490_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|295aa|up_5|NC_015565.1_581505_582390_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|229aa|up_4|NC_015565.1_582409_583096_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas1|344aa|up_3|NC_015565.1_583100_584132_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_2|NC_015565.1_584146_584437_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|530aa|up_1|NC_015565.1_587315_588905_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|260aa|up_0|NC_015565.1_588901_589681_+	PRK06526, PRK06526, transposase; Provisional	NA|173aa|down_0|NC_015565.1_592764_593283_+	NA	NA|168aa|down_1|NC_015565.1_593436_593940_+	NA	NA|696aa|down_2|NC_015565.1_594426_596514_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|584aa|down_3|NC_015565.1_599350_601102_+	pfam02538, Hydantoinase_B, Hydantoinase B/oxoprolinase	NA|112aa|down_4|NC_015565.1_601103_601439_+	pfam07883, Cupin_2, Cupin domain	NA|369aa|down_5|NC_015565.1_601508_602615_+	cd01092, APP-like, Similar to Prolidase and Aminopeptidase P	NA|450aa|down_6|NC_015565.1_602635_603985_+	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|210aa|down_7|NC_015565.1_604133_604763_+	COG2928, COG2928, Uncharacterized conserved protein [Function unknown]	NA|164aa|down_8|NC_015565.1_604817_605309_-	cd02205, CBS_pair_SF, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily	NA|449aa|down_9|NC_015565.1_605330_606677_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
GCF_000214435.1_ASM21443v1	NC_015565	Desulfotomaculum nigrificans CO-1-SRB, complete sequence	3	621902-624166	3,3,3	PILER-CR,CRISPRCasFinder,CRT	no	cas10,csm2gr11,csm3gr7,csm4gr5,csx1	cas3,Cas14b_CAS-V-F,RT,cas14j,csa3,cas5,cas8c,cas7,cas4,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csx1,WYL,cas6,cas8b2,DinG,DEDDh	Type III-D,Type III-B,Type III-A,Type III-C	GTTGCAATTACCACCCGCTAAACAAGGGGACTGAAAC,GTTGCAATTACCACCCGCTAAACAAGGGGACTGAAAC,GTTGCAATTACCACCCGCTAAACAAGGGGACTGAAAC	37,37,37	0	0	NA	NA	NA:NA:NA	30,30,30	30	TypeIII-D,TypeIII-B,TypeIII-A,TypeIII-C	cas3,Cas14b_CAS-V-F,RT,cas14j,csa3,cas5,cas8c,cas7,cas4,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csx1,WYL,cas6,cas8b2,DinG,DEDDh	NA,NA	NA|569aa|up_9|NC_015565.1_610934_612641_+	COG1283, NptA, Na+/phosphate symporter [Inorganic ion transport and metabolism]	NA|236aa|up_8|NC_015565.1_612821_613529_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|464aa|up_7|NC_015565.1_613727_615119_+	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain	NA|232aa|up_6|NC_015565.1_615189_615885_-	cd11009, Zn_dep_PLPC, Zinc dependent phospholipase C (alpha toxin)	NA|216aa|up_5|NC_015565.1_616197_616845_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|364aa|up_4|NC_015565.1_617079_618171_-	pfam00395, SLH, S-layer homology domain	NA|181aa|up_3|NC_015565.1_618393_618936_+	pfam10646, Germane, Sporulation and spore germination	NA|239aa|up_2|NC_015565.1_619067_619784_-	cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methyltransferase, also named CobI or CbiL	NA|280aa|up_1|NC_015565.1_619851_620691_-	pfam06180, CbiK, Cobalt chelatase (CbiK)	NA|207aa|up_0|NC_015565.1_620910_621531_+	COG1739, COG1739, Uncharacterized conserved protein [Function unknown]	cas10|820aa|down_0|NC_015565.1_624279_626739_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|179aa|down_1|NC_015565.1_626743_627280_+	pfam03750, Csm2_III-A, Csm2 Type III-A	csm3gr7|218aa|down_2|NC_015565.1_627282_627936_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|311aa|down_3|NC_015565.1_627949_628882_+	TIGR01903, Hypothetical_protein	csx1|453aa|down_4|NC_015565.1_628878_630237_+	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|352aa|down_5|NC_015565.1_630725_631781_+	pfam02277, DBI_PRT, Phosphoribosyltransferase	NA|465aa|down_6|NC_015565.1_631911_633306_+	PRK01077, PRK01077, cobyrinate a,c-diamide synthase	NA|372aa|down_7|NC_015565.1_633298_634414_+	PRK00075, cbiD, cobalt-precorrin-6A synthase; Reviewed	NA|209aa|down_8|NC_015565.1_634392_635019_+	cd11644, Precorrin-6Y-MT, Precorrin-6Y methyltransferase (also named CbiE)	NA|201aa|down_9|NC_015565.1_635011_635614_+	COG2242, CobL, Precorrin-6B methylase 2 [Coenzyme metabolism]
GCF_000214435.1_ASM21443v1	NC_015565	Desulfotomaculum nigrificans CO-1-SRB, complete sequence	4	804318-808973	4,4,4	PILER-CR,CRISPRCasFinder,CRT	no	cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4	cas3,Cas14b_CAS-V-F,RT,cas14j,csa3,cas5,cas8c,cas7,cas4,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csx1,WYL,cas6,cas8b2,DinG,DEDDh	Unclear	GTTACAATTACCTCCCGGTTATCAAGGGGATTGAAAC,GTTACAATTACCTCCCGGTTATCAAGGGGATTGAAAC,GTTACAATTACCTCCCGGTTATCAAGGGGATTGAAAC	37,37,37	0	0	NA	NA	NA:NA:NA	61,62,62	62	Unclear	cas3,Cas14b_CAS-V-F,RT,cas14j,csa3,cas5,cas8c,cas7,cas4,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csx1,WYL,cas6,cas8b2,DinG,DEDDh	NA,NA	NA|169aa|up_9|NC_015565.1_793934_794441_+	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	cas6|320aa|up_8|NC_015565.1_794604_795564_+	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6	cas8b2|461aa|up_7|NC_015565.1_795692_797075_+	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas7|364aa|up_6|NC_015565.1_797090_798182_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|260aa|up_5|NC_015565.1_798169_798949_+	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	cas3|782aa|up_4|NC_015565.1_798950_801296_+	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas1|340aa|up_3|NC_015565.1_801360_802380_+	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	cas2|89aa|up_2|NC_015565.1_802382_802649_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	cas4|192aa|up_1|NC_015565.1_802641_803217_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas4|304aa|up_0|NC_015565.1_803220_804132_+	pfam06023, Csa1, CRISPR-associated exonuclease Csa1	NA|242aa|down_0|NC_015565.1_809031_809757_-	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|497aa|down_1|NC_015565.1_809753_811244_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|404aa|down_2|NC_015565.1_814240_815452_+	TIGR03407, urea_ABC_UrtA, urea ABC transporter, urea binding protein	NA|302aa|down_3|NC_015565.1_815580_816486_+	TIGR03409, urea_trans_UrtB, urea ABC transporter, permease protein UrtB	NA|357aa|down_4|NC_015565.1_816522_817593_+	TIGR03408, urea_trans_UrtC, urea ABC transporter, permease protein UrtC	NA|253aa|down_5|NC_015565.1_817552_818311_+	TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD	NA|232aa|down_6|NC_015565.1_818303_818999_+	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE	NA|101aa|down_7|NC_015565.1_819026_819329_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|125aa|down_8|NC_015565.1_819358_819733_+	pfam00699, Urease_beta, Urease beta subunit	NA|572aa|down_9|NC_015565.1_819732_821448_+	PRK13207, ureC, urease subunit alpha; Reviewed
GCF_000214435.1_ASM21443v1	NC_015565	Desulfotomaculum nigrificans CO-1-SRB, complete sequence	5	1966544-1966648	5	CRISPRCasFinder	no		cas3,Cas14b_CAS-V-F,RT,cas14j,csa3,cas5,cas8c,cas7,cas4,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csx1,WYL,cas6,cas8b2,DinG,DEDDh	Orphan	AGCCGGATGCTCTACCGTTGAGCTAT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,Cas14b_CAS-V-F,RT,cas14j,csa3,cas5,cas8c,cas7,cas4,cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csx1,WYL,cas6,cas8b2,DinG,DEDDh	NA|163aa|up_6|NC_015565.1_1958649_1959138_+,NA	NA|213aa|up_9|NC_015565.1_1954988_1955627_-	cd02616, HAD_PPase, pyrophosphatase similar to Bacillus subtilis PpaX	NA|404aa|up_8|NC_015565.1_1956490_1957702_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|50aa|up_7|NC_015565.1_1958390_1958540_+	pfam07561, DUF1540, Domain of Unknown Function (DUF1540)	NA|163aa|up_6|NC_015565.1_1958649_1959138_+	NA	NA|138aa|up_5|NC_015565.1_1959197_1959611_-	pfam11906, DUF3426, Protein of unknown function (DUF3426)	NA|155aa|up_4|NC_015565.1_1959922_1960387_+	PRK00203, rnhA, ribonuclease H; Reviewed	NA|596aa|up_3|NC_015565.1_1960434_1962222_+	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF)	NA|373aa|up_2|NC_015565.1_1962309_1963428_-	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3)	NA|231aa|up_1|NC_015565.1_1963418_1964111_-	pfam12847, Methyltransf_18, Methyltransferase domain	NA|635aa|up_0|NC_015565.1_1964258_1966163_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|368aa|down_0|NC_015565.1_1966732_1967836_-	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated	NA|601aa|down_1|NC_015565.1_1967832_1969635_-	PRK05667, dnaG, DNA primase; Validated	NA|336aa|down_2|NC_015565.1_1969831_1970839_-	PRK01286, PRK01286, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional	NA|203aa|down_3|NC_015565.1_1970848_1971457_-	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|188aa|down_4|NC_015565.1_1971561_1972125_-	COG1514, LigT, 2'-5' RNA ligase [Translation, ribosomal structure and biogenesis]	NA|882aa|down_5|NC_015565.1_1972422_1975068_-	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional	NA|286aa|down_6|NC_015565.1_1975160_1976018_-	pfam03618, Kinase-PPPase, Kinase/pyrophosphorylase	NA|212aa|down_7|NC_015565.1_1976004_1976640_-	cd04617, CBS_pair_CcpN, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains of CcpN repressor	NA|695aa|down_8|NC_015565.1_1976839_1978924_-	PRK01233, glyS, glycyl-tRNA synthetase subunit beta; Validated	NA|296aa|down_9|NC_015565.1_1978916_1979804_-	PRK09348, glyQ, glycyl-tRNA synthetase subunit alpha; Validated
