assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000214845.1_ASM21484v1	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	1	102879-103876	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas7,csb2gr5,cas3,cas8u1,cas2,cas1,cas4,cas8b5	cas7,csb2gr5,cas3,cas8u1,cas2,cas1,cas4,cas8b5,cas5,cas6,cas8c,cas7b,csa3	Unclear	GTTGCATCCAAGCTTCACAGCTTGGCTACGTTGCAGG,GTTGCATCCAAGCTTCACAGCTTGGCTACGTTGCAGG,CATCCAAGCTTCACAGCTTGGCTACGTTGCAGG	37,37,33	0	0	NA	NA	NA:NA:NA	13,13,13	13	Unclear	cas2,cas6,DEDDh,csa3,cas3,Cas9_archaeal,cas7,csb2gr5,cas8u1,cas1,cas4,cas8b5,cas5,cas8c,cas7b	cas8u1|337aa|up_0|NC_017273.1_101739_102750_+,NA|118aa|down_2|NC_017273.1_109711_110065_+,NA|160aa|down_7|NC_017273.1_114652_115132_+,NA|60aa|down_8|NC_017273.1_115345_115525_+,NA|63aa|down_9|NC_017273.1_115570_115759_-	NA|51aa|up_9|NC_017273.1_89404_89557_+	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|529aa|up_8|NC_017273.1_89674_91261_+	TIGR01766, Putative_transposase_MJ0751, transposase, IS605 OrfB family, central region	NA|120aa|up_7|NC_017273.1_91438_91798_+	pfam05973, Gp49, Phage derived protein Gp49-like (DUF891)	NA|141aa|up_6|NC_017273.1_91810_92233_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|186aa|up_5|NC_017273.1_92236_92794_+	pfam13384, HTH_23, Homeodomain-like domain	NA|1085aa|up_4|NC_017273.1_92846_96101_+	COG1483, COG1483, Predicted ATPase (AAA+ superfamily) [General function prediction only]	cas7|361aa|up_3|NC_017273.1_96535_97618_+	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	csb2gr5|458aa|up_2|NC_017273.1_97617_98991_+	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	cas3|922aa|up_1|NC_017273.1_98977_101743_+	cd09696, Cas3_I, CRISPR/Cas system-associated protein Cas3; Distinct Cas3 family with HD domain fused to C-termus of Helicase domain	cas8u1|337aa|up_0|NC_017273.1_101739_102750_+	NA	NA|856aa|down_0|NC_017273.1_103912_106480_+	pfam12705, PDDEXK_1, PD-(D/E)XK nuclease superfamily	NA|1015aa|down_1|NC_017273.1_106483_109528_+	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair]	NA|118aa|down_2|NC_017273.1_109711_110065_+	NA	NA|157aa|down_3|NC_017273.1_110221_110692_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|75aa|down_4|NC_017273.1_110776_111001_-	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|184aa|down_5|NC_017273.1_111135_111687_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|322aa|down_6|NC_017273.1_113211_114177_-	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC	NA|160aa|down_7|NC_017273.1_114652_115132_+	NA	NA|60aa|down_8|NC_017273.1_115345_115525_+	NA	NA|63aa|down_9|NC_017273.1_115570_115759_-	NA
GCF_000214845.1_ASM21484v1	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	2	116844-117310	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	csb2gr5,cas3,cas8u1,cas2,cas1,cas4,cas8b5,cas5,cas6	cas7,csb2gr5,cas3,cas8u1,cas2,cas1,cas4,cas8b5,cas5,cas6,cas8c,cas7b,csa3	Unclear	GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC,GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC,GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC	36,36,36	0	0	NA	NA	NA:NA:NA	6,6,6	6	Unclear	cas2,cas6,DEDDh,csa3,cas3,Cas9_archaeal,cas7,csb2gr5,cas8u1,cas1,cas4,cas8b5,cas5,cas8c,cas7b	NA|118aa|up_9|NC_017273.1_109711_110065_+,NA|160aa|up_4|NC_017273.1_114652_115132_+,NA|60aa|up_3|NC_017273.1_115345_115525_+,NA|63aa|up_2|NC_017273.1_115570_115759_-,NA|77aa|up_1|NC_017273.1_115834_116065_+,cas5|305aa|down_4|NC_017273.1_123800_124715_+	NA|118aa|up_9|NC_017273.1_109711_110065_+	NA	NA|157aa|up_8|NC_017273.1_110221_110692_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|75aa|up_7|NC_017273.1_110776_111001_-	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|184aa|up_6|NC_017273.1_111135_111687_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|322aa|up_5|NC_017273.1_113211_114177_-	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC	NA|160aa|up_4|NC_017273.1_114652_115132_+	NA	NA|60aa|up_3|NC_017273.1_115345_115525_+	NA	NA|63aa|up_2|NC_017273.1_115570_115759_-	NA	NA|77aa|up_1|NC_017273.1_115834_116065_+	NA	NA|138aa|up_0|NC_017273.1_116061_116475_+	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	cas2|95aa|down_0|NC_017273.1_117549_117834_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|333aa|down_1|NC_017273.1_117830_118829_-	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	cas4|195aa|down_2|NC_017273.1_118798_119383_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas8b5|767aa|down_3|NC_017273.1_120738_123039_+	PRK03918, PRK03918, DNA double-strand break repair ATPase Rad50	cas5|305aa|down_4|NC_017273.1_123800_124715_+	NA	cas3|818aa|down_5|NC_017273.1_124681_127135_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas6|265aa|down_6|NC_017273.1_127134_127929_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|81aa|down_7|NC_017273.1_130329_130572_+	TIGR01439, Uncharacterized_protein_Mb2626, looped-hinge helix DNA binding domain, AbrB family	NA|152aa|down_8|NC_017273.1_130552_131008_+	pfam13470, PIN_3, PIN domain	NA|146aa|down_9|NC_017273.1_131065_131503_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
GCF_000214845.1_ASM21484v1	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	3	128169-128930	3,3,3	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas4,cas8b5,cas5,cas3,cas6	cas7,csb2gr5,cas3,cas8u1,cas2,cas1,cas4,cas8b5,cas5,cas6,cas8c,cas7b,csa3	Unclear	GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC,GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC,GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	10,10,10	10	Unclear	cas2,cas6,DEDDh,csa3,cas3,Cas9_archaeal,cas7,csb2gr5,cas8u1,cas1,cas4,cas8b5,cas5,cas8c,cas7b	NA|63aa|up_9|NC_017273.1_115570_115759_-,NA|77aa|up_8|NC_017273.1_115834_116065_+,cas5|305aa|up_2|NC_017273.1_123800_124715_+,NA|121aa|down_3|NC_017273.1_131499_131862_+	NA|63aa|up_9|NC_017273.1_115570_115759_-	NA	NA|77aa|up_8|NC_017273.1_115834_116065_+	NA	NA|138aa|up_7|NC_017273.1_116061_116475_+	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	cas2|95aa|up_6|NC_017273.1_117549_117834_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|333aa|up_5|NC_017273.1_117830_118829_-	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	cas4|195aa|up_4|NC_017273.1_118798_119383_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas8b5|767aa|up_3|NC_017273.1_120738_123039_+	PRK03918, PRK03918, DNA double-strand break repair ATPase Rad50	cas5|305aa|up_2|NC_017273.1_123800_124715_+	NA	cas3|818aa|up_1|NC_017273.1_124681_127135_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas6|265aa|up_0|NC_017273.1_127134_127929_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|81aa|down_0|NC_017273.1_130329_130572_+	TIGR01439, Uncharacterized_protein_Mb2626, looped-hinge helix DNA binding domain, AbrB family	NA|152aa|down_1|NC_017273.1_130552_131008_+	pfam13470, PIN_3, PIN domain	NA|146aa|down_2|NC_017273.1_131065_131503_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|121aa|down_3|NC_017273.1_131499_131862_+	NA	NA|314aa|down_4|NC_017273.1_131908_132850_-	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|159aa|down_5|NC_017273.1_132852_133329_-	cd09874, PIN_MT3492-like, VapC-like PIN domain of the hypothetical protein MT3492 of Mycobacterium tuberculosis CDC1551 and other uncharacterized, annotated PilT protein domain proteins	NA|107aa|down_6|NC_017273.1_134817_135138_-	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only]	NA|152aa|down_7|NC_017273.1_137004_137460_-	pfam13470, PIN_3, PIN domain	NA|81aa|down_8|NC_017273.1_137440_137683_-	TIGR01439, Uncharacterized_protein_Mb2626, looped-hinge helix DNA binding domain, AbrB family	NA|587aa|down_9|NC_017273.1_138954_140715_-	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]
GCF_000214845.1_ASM21484v1	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	4	136049-136163	4	CRISPRCasFinder	no	cas2,cas1,cas4,cas8b5,cas5,cas3,cas6	cas7,csb2gr5,cas3,cas8u1,cas2,cas1,cas4,cas8b5,cas5,cas6,cas8c,cas7b,csa3	Unclear	CAATCCCCTTACGGGGCTCAATCCCTTGCAAC	32	0	0	NA	NA	III-A	1	1	Unclear	cas2,cas6,DEDDh,csa3,cas3,Cas9_archaeal,cas7,csb2gr5,cas8u1,cas1,cas4,cas8b5,cas5,cas8c,cas7b	cas5|305aa|up_9|NC_017273.1_123800_124715_+,NA|121aa|up_3|NC_017273.1_131499_131862_+,NA|269aa|down_8|NC_017273.1_147953_148760_-	cas5|305aa|up_9|NC_017273.1_123800_124715_+	NA	cas3|818aa|up_8|NC_017273.1_124681_127135_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas6|265aa|up_7|NC_017273.1_127134_127929_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|81aa|up_6|NC_017273.1_130329_130572_+	TIGR01439, Uncharacterized_protein_Mb2626, looped-hinge helix DNA binding domain, AbrB family	NA|152aa|up_5|NC_017273.1_130552_131008_+	pfam13470, PIN_3, PIN domain	NA|146aa|up_4|NC_017273.1_131065_131503_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|121aa|up_3|NC_017273.1_131499_131862_+	NA	NA|314aa|up_2|NC_017273.1_131908_132850_-	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|159aa|up_1|NC_017273.1_132852_133329_-	cd09874, PIN_MT3492-like, VapC-like PIN domain of the hypothetical protein MT3492 of Mycobacterium tuberculosis CDC1551 and other uncharacterized, annotated PilT protein domain proteins	NA|107aa|up_0|NC_017273.1_134817_135138_-	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only]	NA|152aa|down_0|NC_017273.1_137004_137460_-	pfam13470, PIN_3, PIN domain	NA|81aa|down_1|NC_017273.1_137440_137683_-	TIGR01439, Uncharacterized_protein_Mb2626, looped-hinge helix DNA binding domain, AbrB family	NA|587aa|down_2|NC_017273.1_138954_140715_-	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|267aa|down_3|NC_017273.1_140718_141519_-	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3	NA|364aa|down_4|NC_017273.1_142382_143474_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|367aa|down_5|NC_017273.1_143659_144760_+	pfam13546, DDE_5, DDE superfamily endonuclease	NA|723aa|down_6|NC_017273.1_144775_146944_+	pfam00580, UvrD-helicase, UvrD/REP helicase N-terminal domain	NA|176aa|down_7|NC_017273.1_147346_147874_-	cd09276, Rnase_HI_RT_non_LTR, non-LTR RNase HI domain of reverse transcriptases	NA|269aa|down_8|NC_017273.1_147953_148760_-	NA	NA|362aa|down_9|NC_017273.1_149059_150145_-	pfam13481, AAA_25, AAA domain
GCF_000214845.1_ASM21484v1	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	5	172053-172528	5,4,4	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas5,cas8c,cas7b,cas4,cas1,cas2	cas7,csb2gr5,cas3,cas8u1,cas2,cas1,cas4,cas8b5,cas5,cas6,cas8c,cas7b,csa3	 Type I-U?,Type I-U,Type I-C	GTTTCAATCCTCACCGGCCCTTTCGGGCCGGTGCAAC,GTTTCAATCCTCACCGGCCCTTTCGGGCCGGTGCAAC,GTTTCAATCCTCACCGGCCCTTTCGGGCCGGTGCAAC	37,37,37	0	0	NA	NA	I-C,III-B:I-C,III-B:I-C,III-B	6,6,5	6	TypeI-U?,TypeI-U,TypeI-C	cas2,cas6,DEDDh,csa3,cas3,Cas9_archaeal,cas7,csb2gr5,cas8u1,cas1,cas4,cas8b5,cas5,cas8c,cas7b	NA,NA	NA|363aa|up_9|NC_017273.1_159920_161008_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|258aa|up_8|NC_017273.1_163936_164710_+	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|259aa|up_7|NC_017273.1_164696_165473_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|332aa|up_6|NC_017273.1_165469_166465_+	cd13649, PBP2_Cae31940, Substrate binding domain of an uncharacterized protein similar to ABC-type transporter for thiamin biosynthetic pathway intermediates; a member of the type 2 periplasmic binding fold superfamily	NA|319aa|up_5|NC_017273.1_166492_167449_+	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold	NA|155aa|up_4|NC_017273.1_167448_167913_+	pfam04290, DctQ, Tripartite ATP-independent periplasmic transporters, DctQ component	NA|434aa|up_3|NC_017273.1_167909_169211_+	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit	NA|229aa|up_2|NC_017273.1_169213_169900_+	cd07729, AHL_lactonase_MBL-fold, quorum-quenching N-acyl-homoserine lactonase, MBL-fold metallo-hydrolase domain	NA|251aa|up_1|NC_017273.1_169912_170665_+	pfam03746, LamB_YcsF, LamB/YcsF family	NA|407aa|up_0|NC_017273.1_170769_171990_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	cas3|787aa|down_0|NC_017273.1_172553_174914_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|230aa|down_1|NC_017273.1_174923_175613_+	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|603aa|down_2|NC_017273.1_175545_177354_+	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG	cas7b|384aa|down_3|NC_017273.1_177353_178505_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|195aa|down_4|NC_017273.1_178494_179079_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas1|340aa|down_5|NC_017273.1_179075_180095_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|100aa|down_6|NC_017273.1_180097_180397_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|315aa|down_7|NC_017273.1_182363_183308_+	pfam01555, N6_N4_Mtase, DNA methylase	NA|281aa|down_8|NC_017273.1_186201_187044_+	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|327aa|down_9|NC_017273.1_187120_188101_+	COG1609, PurR, Transcriptional regulators [Transcription]
GCF_000214845.1_ASM21484v1	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	6	180589-181953	5,6,5	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7b,cas4,cas1,cas2	cas7,csb2gr5,cas3,cas8u1,cas2,cas1,cas4,cas8b5,cas5,cas6,cas8c,cas7b,csa3	 Type I-U?,Type I-U,Type I-C	GTTTCAATCCTCACCGGCCCTTTCGGGCCGGTGCAAC,GTTGCACCGGCCCGAAAGGGCCGGTGAGGATTGAAAC,GTTGCACCGGCCCGAAAGGGCCGGTGAGGATTGAAAC	37,37,37	0	0	NA	NA	I-C,III-B:I-C,III-B:I-C,III-B	17,18,18	18	TypeI-U?,TypeI-U,TypeI-C	cas2,cas6,DEDDh,csa3,cas3,Cas9_archaeal,cas7,csb2gr5,cas8u1,cas1,cas4,cas8b5,cas5,cas8c,cas7b	NA,NA	NA|229aa|up_9|NC_017273.1_169213_169900_+	cd07729, AHL_lactonase_MBL-fold, quorum-quenching N-acyl-homoserine lactonase, MBL-fold metallo-hydrolase domain	NA|251aa|up_8|NC_017273.1_169912_170665_+	pfam03746, LamB_YcsF, LamB/YcsF family	NA|407aa|up_7|NC_017273.1_170769_171990_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	cas3|787aa|up_6|NC_017273.1_172553_174914_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|230aa|up_5|NC_017273.1_174923_175613_+	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|603aa|up_4|NC_017273.1_175545_177354_+	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG	cas7b|384aa|up_3|NC_017273.1_177353_178505_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|195aa|up_2|NC_017273.1_178494_179079_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas1|340aa|up_1|NC_017273.1_179075_180095_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|100aa|up_0|NC_017273.1_180097_180397_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|315aa|down_0|NC_017273.1_182363_183308_+	pfam01555, N6_N4_Mtase, DNA methylase	NA|281aa|down_1|NC_017273.1_186201_187044_+	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|327aa|down_2|NC_017273.1_187120_188101_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|411aa|down_3|NC_017273.1_188168_189401_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|369aa|down_4|NC_017273.1_189448_190555_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|455aa|down_5|NC_017273.1_190551_191916_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|595aa|down_6|NC_017273.1_191919_193704_+	COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism]	NA|455aa|down_7|NC_017273.1_193706_195071_-	pfam07905, PucR, Purine catabolism regulatory protein-like family	NA|475aa|down_8|NC_017273.1_195102_196527_+	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|438aa|down_9|NC_017273.1_196520_197834_+	PRK06062, PRK06062, hypothetical protein; Provisional
GCF_000214845.1_ASM21484v1	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	7	265744-265948	6	CRT	no	csa3	cas7,csb2gr5,cas3,cas8u1,cas2,cas1,cas4,cas8b5,cas5,cas6,cas8c,cas7b,csa3	Type I-A	TCGGAAGACTTGGGGAGAAAGTATCGGAAGACTTGGG	37	1	1	265838-265856	NC_017273.1_265725-265743	NA	3	3	Orphan	cas2,cas6,DEDDh,csa3,cas3,Cas9_archaeal,cas7,csb2gr5,cas8u1,cas1,cas4,cas8b5,cas5,cas8c,cas7b	NA|126aa|up_6|NC_017273.1_258277_258655_+,NA|67aa|up_4|NC_017273.1_259792_259993_-,NA|92aa|down_2|NC_017273.1_268041_268317_+,NA|71aa|down_3|NC_017273.1_268680_268893_+	NA|141aa|up_9|NC_017273.1_257320_257743_+	COG1959, COG1959, Predicted transcriptional regulator [Transcription]	NA|66aa|up_8|NC_017273.1_257790_257988_+	pfam04405, ScdA_N, Domain of Unknown function (DUF542)	NA|99aa|up_7|NC_017273.1_257984_258281_+	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain	NA|126aa|up_6|NC_017273.1_258277_258655_+	NA	NA|366aa|up_5|NC_017273.1_258698_259796_+	pfam14256, YwiC, YwiC-like protein	NA|67aa|up_4|NC_017273.1_259792_259993_-	NA	csa3|113aa|up_3|NC_017273.1_260641_260980_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|161aa|up_2|NC_017273.1_261077_261560_+	TIGR02694, Arsenite_oxidase_subunit_AioB, arsenite oxidase, small subunit	NA|862aa|up_1|NC_017273.1_261571_264157_+	TIGR02693, Arsenite_oxidase_subunit_AioA, arsenite oxidase, large subunit	NA|464aa|up_0|NC_017273.1_264226_265618_+	pfam10134, RPA, Replication initiator protein A	NA|323aa|down_0|NC_017273.1_266132_267101_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|296aa|down_1|NC_017273.1_267097_267985_+	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|92aa|down_2|NC_017273.1_268041_268317_+	NA	NA|71aa|down_3|NC_017273.1_268680_268893_+	NA	NA|46aa|down_4|NC_017273.1_269041_269179_+	COG2452, COG2452, Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair]	NA|98aa|down_5|NC_017273.1_269166_269460_+	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain	NA|628aa|down_6|NC_017273.1_269966_271850_-	pfam16241, DUF4900, Domain of unknown function (DUF4900)	NA|307aa|down_7|NC_017273.1_271866_272787_-	COG4795, PulJ, Type II secretory pathway, component PulJ [Intracellular trafficking and secretion]	NA|160aa|down_8|NC_017273.1_272798_273278_-	TIGR02523, probable_type-4_fimbrial_biogenesis_protein, type IV pilus modification protein PilV	NA|140aa|down_9|NC_017273.1_273274_273694_-	COG4970, FimT, Tfp pilus assembly protein FimT [Cell motility and secretion / Intracellular trafficking and secretion]
GCF_000214845.1_ASM21484v1	NC_017272	Thermus thermophilus SG0.5JP17-16, complete genome	1	537373-537480	1	CRISPRCasFinder	no	DEDDh	cas2,cas6,DEDDh,csa3,cas3,Cas9_archaeal	Unclear	CGGGCCTCCGCCTGGAGGGGGAGG	24	0	0	NA	NA	NA	1	1	Orphan	cas2,cas6,DEDDh,csa3,cas3,Cas9_archaeal,cas7,csb2gr5,cas8u1,cas1,cas4,cas8b5,cas5,cas8c,cas7b	NA,NA|351aa|down_6|NC_017272.1_547167_548220_+,NA|567aa|down_8|NC_017272.1_549171_550872_-	NA|397aa|up_9|NC_017272.1_523904_525095_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|103aa|up_8|NC_017272.1_525091_525400_-	pfam04456, DUF503, Protein of unknown function (DUF503)	NA|175aa|up_7|NC_017272.1_525416_525941_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|823aa|up_6|NC_017272.1_526509_528978_-	COG4775, COG4775, Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane]	NA|276aa|up_5|NC_017272.1_529023_529851_+	cd09009, PNP-EcPNPII_like, purine nucleoside phosphorylases similar to human PNP and Escherichia coli PNP-II (XapA)	NA|212aa|up_4|NC_017272.1_529915_530551_+	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins	NA|151aa|up_3|NC_017272.1_530559_531012_+	pfam05103, DivIVA, DivIVA protein	NA|182aa|up_2|NC_017272.1_530972_531518_-	cd06259, YdcF-like, YdcF-like	NA|504aa|up_1|NC_017272.1_531691_533203_+	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|89aa|up_0|NC_017272.1_533190_533457_-	PRK14433, PRK14433, acylphosphatase; Provisional	NA|344aa|down_0|NC_017272.1_541547_542579_+	cd05281, TDH, Threonine dehydrogenase	NA|353aa|down_1|NC_017272.1_542618_543677_+	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase	NA|137aa|down_2|NC_017272.1_543662_544073_-	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|303aa|down_3|NC_017272.1_544091_545000_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|472aa|down_4|NC_017272.1_545007_546423_+	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	DEDDh|248aa|down_5|NC_017272.1_546422_547166_+	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|351aa|down_6|NC_017272.1_547167_548220_+	NA	NA|330aa|down_7|NC_017272.1_548197_549187_-	TIGR03609, S_layer_CsaB, polysaccharide pyruvyl transferase CsaB	NA|567aa|down_8|NC_017272.1_549171_550872_-	NA	NA|212aa|down_9|NC_017272.1_550868_551504_-	PRK05480, PRK05480, uridine/cytidine kinase; Provisional
GCF_000214845.1_ASM21484v1	NC_017272	Thermus thermophilus SG0.5JP17-16, complete genome	2	1543969-1544074	2	CRISPRCasFinder	no		cas2,cas6,DEDDh,csa3,cas3,Cas9_archaeal	Orphan	CCAGGGCCGCCTGGGCGAGGAGGA	24	0	0	NA	NA	NA	1	1	Orphan	cas2,cas6,DEDDh,csa3,cas3,Cas9_archaeal,cas7,csb2gr5,cas8u1,cas1,cas4,cas8b5,cas5,cas8c,cas7b	NA|39aa|up_9|NC_017272.1_1534372_1534489_-,NA|128aa|up_4|NC_017272.1_1538852_1539236_-,NA|572aa|down_4|NC_017272.1_1549288_1551004_+	NA|39aa|up_9|NC_017272.1_1534372_1534489_-	NA	NA|230aa|up_8|NC_017272.1_1534731_1535421_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|296aa|up_7|NC_017272.1_1535479_1536367_-	pfam13224, DUF4032, Domain of unknown function (DUF4032)	NA|396aa|up_6|NC_017272.1_1536462_1537650_+	TIGR01825, 8-amino-7-oxononanoate_synthase_1, pyridoxal phosphate-dependent acyltransferase, putative	NA|405aa|up_5|NC_017272.1_1537651_1538866_+	pfam12950, TaqI_C, TaqI-like C-terminal specificity domain	NA|128aa|up_4|NC_017272.1_1538852_1539236_-	NA	NA|635aa|up_3|NC_017272.1_1539375_1541280_+	PRK05644, gyrB, DNA gyrase subunit B; Validated	NA|320aa|up_2|NC_017272.1_1541327_1542287_-	PRK01966, ddl, D-alanine--D-alanine ligase	NA|184aa|up_1|NC_017272.1_1542296_1542848_-	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	NA|207aa|up_0|NC_017272.1_1542863_1543484_-	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed	NA|435aa|down_0|NC_017272.1_1544628_1545933_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|217aa|down_1|NC_017272.1_1545901_1546552_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|653aa|down_2|NC_017272.1_1546548_1548507_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|255aa|down_3|NC_017272.1_1548506_1549271_-	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|572aa|down_4|NC_017272.1_1549288_1551004_+	NA	NA|333aa|down_5|NC_017272.1_1551446_1552445_-	PRK09283, PRK09283, porphobilinogen synthase	NA|106aa|down_6|NC_017272.1_1552457_1552775_+	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|195aa|down_7|NC_017272.1_1552775_1553360_+	PRK00076, recR, recombination protein RecR; Reviewed	NA|128aa|down_8|NC_017272.1_1553362_1553746_+	COG2018, COG2018, Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only]	NA|114aa|down_9|NC_017272.1_1553733_1554075_+	smart00960, Robl_LC7, Roadblock/LC7 domain
