The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	440026	13556	23423	440026	tRNA,transposase	Staphylococcus_phage(33.33%)	9	NA	NA
WP_014510997.1|13556_16145_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	38.4	3.1e-144
WP_014510998.1|16321_16603_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_029765920.1|16619_17579_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	28.1	1.0e-12
WP_014511000.1|17565_18015_+|transposase	transposase	transposase	A0A220NQR7	Corynebacterium_phage	42.2	3.7e-05
WP_014511001.1|18201_18969_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014511002.1|18968_19895_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.5	7.4e-24
WP_014511003.1|20376_20778_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_014511004.1|20758_21733_+	ribonucleotide-diphosphate reductase subunit beta	NA	M4I0Q2	Staphylococcus_phage	45.2	7.4e-75
WP_014511005.1|21743_23423_+	ribonucleoside-diphosphate reductase subunit alpha	NA	Q2XUY0	environmental_halophage	54.4	5.2e-177
>prophage 2
NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	440026	89674	150987	440026	integrase,transposase	Cafeteria_roenbergensis_virus(25.0%)	46	130250:130283	161598:161631
WP_014511080.1|89674_91261_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	NA	NA	NA	NA
WP_014511081.1|91438_91798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014511082.1|91810_92233_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_014511083.1|92236_92794_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_014511084.1|92846_96101_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_014511085.1|96535_97618_+	CRISPR-associated protein	NA	NA	NA	NA	NA
WP_014511086.1|97617_98991_+	type I-U CRISPR-associated protein Cas5/Cas6	NA	NA	NA	NA	NA
WP_014511087.1|98977_101743_+	type I-U CRISPR-associated helicase/endonuclease Cas3	NA	NA	NA	NA	NA
WP_014511088.1|101739_102750_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014511089.1|103912_106480_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA	NA
WP_014511090.1|106483_109528_+	AAA family ATPase	NA	E3T5J8	Cafeteria_roenbergensis_virus	27.1	2.5e-07
WP_029766039.1|109711_110065_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014511091.1|110221_110692_-	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
WP_014511092.1|110776_111001_-	addiction module toxin, HicA family	NA	NA	NA	NA	NA
WP_014511093.1|111135_111687_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_014511096.1|113211_114177_-	recombinase XerD	NA	NA	NA	NA	NA
WP_124105779.1|114652_115132_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081466172.1|115345_115525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008633013.1|115570_115759_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011229075.1|115834_116065_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_014511097.1|116061_116475_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_011174371.1|117549_117834_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA	NA
WP_081466159.1|117830_118829_-	CRISPR-associated endonuclease Cas1	NA	NA	NA	NA	NA
WP_041444555.1|118798_119383_-	CRISPR-associated protein Cas4	NA	NA	NA	NA	NA
WP_014511101.1|120738_123039_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081466160.1|123800_124715_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014511104.1|124681_127135_+	CRISPR-associated helicase Cas3'	NA	A7WK98	Acidianus_filamentous_virus	23.5	2.4e-05
WP_014511105.1|127134_127929_+	CRISPR-associated endoribonuclease Cas6	NA	NA	NA	NA	NA
130250:130283	attL	CCTGGGGCTCTATGCGGTATAACGGTCAAGTCTG	NA	NA	NA	NA
WP_014511106.1|130329_130572_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_014511107.1|130552_131008_+	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_014511108.1|131065_131503_+	ParA family protein	NA	NA	NA	NA	NA
WP_014511109.1|131499_131862_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014511110.1|131908_132850_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1B1IQT7	uncultured_Mediterranean_phage	29.6	9.9e-16
WP_014511111.1|132852_133329_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_014630458.1|134817_135138_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_014511107.1|137004_137460_-	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_008633599.1|137440_137683_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_014511116.1|138954_140715_-	GMC family oxidoreductase	NA	NA	NA	NA	NA
WP_014511117.1|140718_141519_-	gluconate 2-dehydrogenase subunit 3 family protein	NA	NA	NA	NA	NA
WP_014511118.1|142382_143474_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_041445142.1|143659_144760_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_014511120.1|144775_146944_+	AAA family ATPase	NA	A0A126DN25	Acinetobacter_phage	31.3	2.8e-53
WP_014511121.1|147346_147874_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014511122.1|147953_148760_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041445145.1|149059_150145_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_014509880.1|150462_150987_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
161598:161631	attR	CAGACTTGACCGTTATACCGCATAGAGCCCCAGG	NA	NA	NA	NA
>prophage 3
NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	440026	350853	396075	440026	protease,transposase	Planktothrix_phage(40.0%)	42	NA	NA
WP_041445191.1|350853_351585_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_014511082.1|351723_352146_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_014511303.1|352149_352707_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014511304.1|352759_356014_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_014511305.1|357367_357946_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_081466168.1|357950_358307_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_155983636.1|359062_360691_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014511308.1|360704_361727_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_014511309.1|361731_362577_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_014511310.1|362582_363548_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.9	9.5e-14
WP_155983637.1|363516_364509_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.3	6.5e-18
WP_014511312.1|364501_365662_+	aminopeptidase P family protein	NA	NA	NA	NA	NA
WP_014511313.1|365675_367748_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_014511314.1|367760_369416_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_014511315.1|369454_371029_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_041445286.1|371330_372431_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_014511317.1|372603_372873_+	HypC/HybG/HupF family hydrogenase formation chaperone	NA	NA	NA	NA	NA
WP_014511318.1|372881_373109_+	HypC/HybG/HupF family hydrogenase formation chaperone	NA	NA	NA	NA	NA
WP_014511319.1|373112_374237_+	hydrogenase formation protein HypD	NA	NA	NA	NA	NA
WP_014511320.1|374229_375264_+	hydrogenase expression/formation protein HypE	NA	NA	NA	NA	NA
WP_014511321.1|375276_376455_+	SIS domain-containing protein	NA	A0A067XQR2	Caulobacter_phage	31.9	1.4e-11
WP_014511322.1|376447_376708_+	glutaredoxin	NA	NA	NA	NA	NA
WP_014511323.1|376789_379063_+	carbamoyltransferase HypF	NA	NA	NA	NA	NA
WP_126170838.1|379122_380031_+	PIG-L family deacetylase	NA	NA	NA	NA	NA
WP_014511325.1|380080_380596_+	sigma-70 family RNA polymerase sigma factor	NA	A0A0F6TH34	Sinorhizobium_phage	26.3	1.1e-05
WP_014511326.1|380592_381225_+	anti-sigma K factor	NA	NA	NA	NA	NA
WP_155983638.1|381337_381787_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_155983650.1|382006_382090_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_014511327.1|382874_383909_-	HoxN/HupN/NixA family nickel/cobalt transporter	NA	NA	NA	NA	NA
WP_014511328.1|384388_384922_+	DUF1641 domain-containing protein	NA	NA	NA	NA	NA
WP_014511329.1|384914_385319_+	hydrogenase maturation nickel metallochaperone HypA	NA	NA	NA	NA	NA
WP_014511330.1|385290_386013_+	hydrogenase nickel incorporation protein HypB	NA	NA	NA	NA	NA
WP_014511331.1|386128_387100_+	hydrogenase	NA	NA	NA	NA	NA
WP_014511332.1|387161_388790_+	nickel-dependent hydrogenase large subunit	NA	NA	NA	NA	NA
WP_014511333.1|388843_389323_+|protease	hydrogenase maturation protease	protease	NA	NA	NA	NA
WP_014511334.1|389300_389603_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014511335.1|389615_390875_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014511336.1|390922_391300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014511337.1|391302_392160_+	Rieske 2Fe-2S domain-containing protein	NA	A0A0K0KWE8	Prochlorococcus_phage	34.9	7.1e-05
WP_014511338.1|392141_393248_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014511339.1|393365_394898_-	carboxypeptidase M32	NA	NA	NA	NA	NA
WP_041444900.1|394974_396075_+|transposase	transposase	transposase	NA	NA	NA	NA
