assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000224745.1_ASM22474v1	NC_015970	Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, complete sequence	1	35432-35528	1	CRISPRCasFinder	no	c2c9_V-U4,csm5gr7,csm4gr5,csm3gr7,csm2gr11	WYL,c2c9_V-U4,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20,cas6,cas2,cas1,cas14j	Type III-A	TTTCAATACCAAAAAGGTGCGATTAAAA	28	0	0	NA	NA	I-A,II-B,III-A	1	1	TypeIII-A	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA|96aa|up_6|NC_015970.1_25727_26015_+,NA|136aa|up_3|NC_015970.1_27874_28282_+,NA|185aa|down_0|NC_015970.1_36217_36772_+,NA|115aa|down_1|NC_015970.1_36784_37129_+,NA|119aa|down_2|NC_015970.1_37125_37482_+,NA|124aa|down_3|NC_015970.1_38233_38605_+,NA|90aa|down_4|NC_015970.1_38760_39030_-,NA|169aa|down_7|NC_015970.1_41244_41751_+,NA|177aa|down_8|NC_015970.1_41763_42294_+,NA|290aa|down_9|NC_015970.1_42290_43160_+	NA|288aa|up_9|NC_015970.1_22802_23666_-	cd10447, GIY-YIG_unchar_2, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria and archaea	NA|145aa|up_8|NC_015970.1_23828_24263_+	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit	NA|420aa|up_7|NC_015970.1_24270_25530_+	cd01700, PolY_Pol_V_umuC, umuC subunit of DNA Polymerase V	NA|96aa|up_6|NC_015970.1_25727_26015_+	NA	NA|188aa|up_5|NC_015970.1_26104_26668_+	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain	c2c9_V-U4|421aa|up_4|NC_015970.1_26664_27927_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|136aa|up_3|NC_015970.1_27874_28282_+	NA	NA|80aa|up_2|NC_015970.1_28626_28866_+	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|797aa|up_1|NC_015970.1_30295_32686_+	COG3292, COG3292, Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]	NA|636aa|up_0|NC_015970.1_32713_34621_+	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain	NA|185aa|down_0|NC_015970.1_36217_36772_+	NA	NA|115aa|down_1|NC_015970.1_36784_37129_+	NA	NA|119aa|down_2|NC_015970.1_37125_37482_+	NA	NA|124aa|down_3|NC_015970.1_38233_38605_+	NA	NA|90aa|down_4|NC_015970.1_38760_39030_-	NA	NA|280aa|down_5|NC_015970.1_39131_39971_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|427aa|down_6|NC_015970.1_39967_41248_+	COG3864, COG3864, Uncharacterized protein conserved in bacteria [Function unknown]	NA|169aa|down_7|NC_015970.1_41244_41751_+	NA	NA|177aa|down_8|NC_015970.1_41763_42294_+	NA	NA|290aa|down_9|NC_015970.1_42290_43160_+	NA
GCF_000224745.1_ASM22474v1	NC_015970	Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, complete sequence	2	46177-46632	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20	WYL,c2c9_V-U4,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20,cas6,cas2,cas1,cas14j	Type III-B,Type III-C,Type III-A,Type III-D	GGGTCATCCCTGCGCGCGCGGGAGTCGG,GGGTCATCCCTGCGCGCGCGGGAGTCGG,GGGTCATCCCTGCGCGCGCGGGAGTCGG	28,28,28	0	0	NA	NA	NA:NA:NA	6,7,7	7	TypeIII-B,TypeIII-C,TypeIII-A,TypeIII-D	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA|124aa|up_9|NC_015970.1_38233_38605_+,NA|90aa|up_8|NC_015970.1_38760_39030_-,NA|169aa|up_5|NC_015970.1_41244_41751_+,NA|177aa|up_4|NC_015970.1_41763_42294_+,NA|290aa|up_3|NC_015970.1_42290_43160_+,NA	NA|124aa|up_9|NC_015970.1_38233_38605_+	NA	NA|90aa|up_8|NC_015970.1_38760_39030_-	NA	NA|280aa|up_7|NC_015970.1_39131_39971_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|427aa|up_6|NC_015970.1_39967_41248_+	COG3864, COG3864, Uncharacterized protein conserved in bacteria [Function unknown]	NA|169aa|up_5|NC_015970.1_41244_41751_+	NA	NA|177aa|up_4|NC_015970.1_41763_42294_+	NA	NA|290aa|up_3|NC_015970.1_42290_43160_+	NA	NA|114aa|up_2|NC_015970.1_43246_43588_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|130aa|up_1|NC_015970.1_43491_43881_-	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain	c2c9_V-U4|510aa|up_0|NC_015970.1_44554_46084_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|397aa|down_0|NC_015970.1_48256_49447_-	COG1672, COG1672, Predicted ATPase (AAA+ superfamily) [General function prediction only]	csm5gr7|551aa|down_1|NC_015970.1_50993_52646_-	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	csm4gr5|340aa|down_2|NC_015970.1_52664_53684_-	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4	csm3gr7|265aa|down_3|NC_015970.1_53680_54475_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|127aa|down_4|NC_015970.1_54491_54872_-	pfam03750, Csm2_III-A, Csm2 Type III-A	cas10|738aa|down_5|NC_015970.1_54901_57115_-	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE	csx1|291aa|down_6|NC_015970.1_57218_58091_-	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|59aa|down_7|NC_015970.1_59562_59739_+	pfam14020, DUF4236, Protein of unknown function (DUF4236)	NA|341aa|down_8|NC_015970.1_59863_60886_+	COG4872, COG4872, Predicted membrane protein [Function unknown]	NA|603aa|down_9|NC_015970.1_60904_62713_+	pfam09787, Golgin_A5, Golgin subfamily A member 5
GCF_000224745.1_ASM22474v1	NC_015970	Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, complete sequence	3	50241-50807	2,2,3	CRT,PILER-CR,CRISPRCasFinder	no	c2c9_V-U4,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20,cas6	WYL,c2c9_V-U4,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20,cas6,cas2,cas1,cas14j	Type III-B,Type III-C,Type III-A,Type III-D	GGTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC,GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC,GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC	38,37,37	0	0	NA	NA	NA:NA:NA	7,7,7	7	TypeIII-B,TypeIII-C,TypeIII-A,TypeIII-D	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA|90aa|up_9|NC_015970.1_38760_39030_-,NA|169aa|up_6|NC_015970.1_41244_41751_+,NA|177aa|up_5|NC_015970.1_41763_42294_+,NA|290aa|up_4|NC_015970.1_42290_43160_+,NA|273aa|down_9|NC_015970.1_62720_63539_+	NA|90aa|up_9|NC_015970.1_38760_39030_-	NA	NA|280aa|up_8|NC_015970.1_39131_39971_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|427aa|up_7|NC_015970.1_39967_41248_+	COG3864, COG3864, Uncharacterized protein conserved in bacteria [Function unknown]	NA|169aa|up_6|NC_015970.1_41244_41751_+	NA	NA|177aa|up_5|NC_015970.1_41763_42294_+	NA	NA|290aa|up_4|NC_015970.1_42290_43160_+	NA	NA|114aa|up_3|NC_015970.1_43246_43588_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|130aa|up_2|NC_015970.1_43491_43881_-	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain	c2c9_V-U4|510aa|up_1|NC_015970.1_44554_46084_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|397aa|up_0|NC_015970.1_48256_49447_-	COG1672, COG1672, Predicted ATPase (AAA+ superfamily) [General function prediction only]	csm5gr7|551aa|down_0|NC_015970.1_50993_52646_-	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	csm4gr5|340aa|down_1|NC_015970.1_52664_53684_-	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4	csm3gr7|265aa|down_2|NC_015970.1_53680_54475_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|127aa|down_3|NC_015970.1_54491_54872_-	pfam03750, Csm2_III-A, Csm2 Type III-A	cas10|738aa|down_4|NC_015970.1_54901_57115_-	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE	csx1|291aa|down_5|NC_015970.1_57218_58091_-	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|59aa|down_6|NC_015970.1_59562_59739_+	pfam14020, DUF4236, Protein of unknown function (DUF4236)	NA|341aa|down_7|NC_015970.1_59863_60886_+	COG4872, COG4872, Predicted membrane protein [Function unknown]	NA|603aa|down_8|NC_015970.1_60904_62713_+	pfam09787, Golgin_A5, Golgin subfamily A member 5	NA|273aa|down_9|NC_015970.1_62720_63539_+	NA
GCF_000224745.1_ASM22474v1	NC_015970	Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, complete sequence	4	58250-59274	4,3,3	CRISPRCasFinder,CRT,PILER-CR	no	c2c9_V-U4,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20,cas6,cas2,cas1	WYL,c2c9_V-U4,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20,cas6,cas2,cas1,cas14j	Type III-B,Type III-C,Type III-A,Type III-D	GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC,GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC,GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC	37,37,37	0	0	NA	NA	NA:NA:NA	13,13,12	13	TypeIII-B,TypeIII-C,TypeIII-A,TypeIII-D	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA,NA|273aa|down_3|NC_015970.1_62720_63539_+,csx20|131aa|down_5|NC_015970.1_64803_65196_+,NA|133aa|down_6|NC_015970.1_65309_65708_+,NA|122aa|down_7|NC_015970.1_65711_66077_+	NA|114aa|up_9|NC_015970.1_43246_43588_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|130aa|up_8|NC_015970.1_43491_43881_-	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain	c2c9_V-U4|510aa|up_7|NC_015970.1_44554_46084_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|397aa|up_6|NC_015970.1_48256_49447_-	COG1672, COG1672, Predicted ATPase (AAA+ superfamily) [General function prediction only]	csm5gr7|551aa|up_5|NC_015970.1_50993_52646_-	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	csm4gr5|340aa|up_4|NC_015970.1_52664_53684_-	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4	csm3gr7|265aa|up_3|NC_015970.1_53680_54475_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|127aa|up_2|NC_015970.1_54491_54872_-	pfam03750, Csm2_III-A, Csm2 Type III-A	cas10|738aa|up_1|NC_015970.1_54901_57115_-	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE	csx1|291aa|up_0|NC_015970.1_57218_58091_-	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|59aa|down_0|NC_015970.1_59562_59739_+	pfam14020, DUF4236, Protein of unknown function (DUF4236)	NA|341aa|down_1|NC_015970.1_59863_60886_+	COG4872, COG4872, Predicted membrane protein [Function unknown]	NA|603aa|down_2|NC_015970.1_60904_62713_+	pfam09787, Golgin_A5, Golgin subfamily A member 5	NA|273aa|down_3|NC_015970.1_62720_63539_+	NA	csx1|427aa|down_4|NC_015970.1_63542_64823_+	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	csx20|131aa|down_5|NC_015970.1_64803_65196_+	NA	NA|133aa|down_6|NC_015970.1_65309_65708_+	NA	NA|122aa|down_7|NC_015970.1_65711_66077_+	NA	csx1|395aa|down_8|NC_015970.1_66130_67315_+	cd09686, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	csx1|447aa|down_9|NC_015970.1_67321_68662_+	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1
GCF_000224745.1_ASM22474v1	NC_015970	Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, complete sequence	5	72658-73245	4,5,4	PILER-CR,CRISPRCasFinder,CRT	no	csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20,cas6,cas2,cas1	WYL,c2c9_V-U4,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20,cas6,cas2,cas1,cas14j	Type III-B,Type III-C,Type III-A,Type III-D	GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC,GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC,GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC	37,37,37	0	0	NA	NA	NA:NA:NA	7,7,7	7	TypeIII-B,TypeIII-C,TypeIII-A,TypeIII-D	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	csx20|131aa|up_8|NC_015970.1_64803_65196_+,NA|133aa|up_7|NC_015970.1_65309_65708_+,NA|122aa|up_6|NC_015970.1_65711_66077_+,NA|125aa|down_0|NC_015970.1_73465_73840_-,NA|107aa|down_1|NC_015970.1_73900_74221_-,NA|182aa|down_6|NC_015970.1_79089_79635_-,NA|196aa|down_7|NC_015970.1_80006_80594_-	csx1|427aa|up_9|NC_015970.1_63542_64823_+	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	csx20|131aa|up_8|NC_015970.1_64803_65196_+	NA	NA|133aa|up_7|NC_015970.1_65309_65708_+	NA	NA|122aa|up_6|NC_015970.1_65711_66077_+	NA	csx1|395aa|up_5|NC_015970.1_66130_67315_+	cd09686, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	csx1|447aa|up_4|NC_015970.1_67321_68662_+	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	cas6|330aa|up_3|NC_015970.1_68647_69637_-	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6	NA|289aa|up_2|NC_015970.1_69706_70573_-	cd06257, DnaJ, DnaJ domain or J-domain	cas2|94aa|up_1|NC_015970.1_70589_70871_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|533aa|up_0|NC_015970.1_70871_72470_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|125aa|down_0|NC_015970.1_73465_73840_-	NA	NA|107aa|down_1|NC_015970.1_73900_74221_-	NA	NA|123aa|down_2|NC_015970.1_74499_74868_-	PRK06642, PRK06642, single-stranded DNA-binding protein; Provisional	NA|90aa|down_3|NC_015970.1_74875_75145_-	PHA03146, PHA03146, helicase-primase primase subunit; Provisional	NA|679aa|down_4|NC_015970.1_75332_77369_+	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins	NA|491aa|down_5|NC_015970.1_77386_78859_+	sd00006, TPR, Tetratricopeptide repeat	NA|182aa|down_6|NC_015970.1_79089_79635_-	NA	NA|196aa|down_7|NC_015970.1_80006_80594_-	NA	csx1|511aa|down_8|NC_015970.1_81040_82573_-	TIGR02710, conserved_hypothetical_protein, CRISPR-associated protein, TIGR02710 family	NA|211aa|down_9|NC_015970.1_82873_83506_+	smart00487, DEXDc, DEAD-like helicases superfamily
GCF_000224745.1_ASM22474v1	NC_015970	Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, complete sequence	6	79804-79997	5,6	PILER-CR,CRISPRCasFinder	no	csx1,csx20,cas6,cas2,cas1,cas14j	WYL,c2c9_V-U4,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20,cas6,cas2,cas1,cas14j	Unclear	GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGACCGCCTG,GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC	43,37	0	0	NA	NA	NA:NA	2,2	2	TypeV	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA|125aa|up_6|NC_015970.1_73465_73840_-,NA|107aa|up_5|NC_015970.1_73900_74221_-,NA|182aa|up_0|NC_015970.1_79089_79635_-,NA|196aa|down_0|NC_015970.1_80006_80594_-,NA|776aa|down_3|NC_015970.1_83509_85837_+,NA|116aa|down_9|NC_015970.1_94960_95308_+	NA|289aa|up_9|NC_015970.1_69706_70573_-	cd06257, DnaJ, DnaJ domain or J-domain	cas2|94aa|up_8|NC_015970.1_70589_70871_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|533aa|up_7|NC_015970.1_70871_72470_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|125aa|up_6|NC_015970.1_73465_73840_-	NA	NA|107aa|up_5|NC_015970.1_73900_74221_-	NA	NA|123aa|up_4|NC_015970.1_74499_74868_-	PRK06642, PRK06642, single-stranded DNA-binding protein; Provisional	NA|90aa|up_3|NC_015970.1_74875_75145_-	PHA03146, PHA03146, helicase-primase primase subunit; Provisional	NA|679aa|up_2|NC_015970.1_75332_77369_+	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins	NA|491aa|up_1|NC_015970.1_77386_78859_+	sd00006, TPR, Tetratricopeptide repeat	NA|182aa|up_0|NC_015970.1_79089_79635_-	NA	NA|196aa|down_0|NC_015970.1_80006_80594_-	NA	csx1|511aa|down_1|NC_015970.1_81040_82573_-	TIGR02710, conserved_hypothetical_protein, CRISPR-associated protein, TIGR02710 family	NA|211aa|down_2|NC_015970.1_82873_83506_+	smart00487, DEXDc, DEAD-like helicases superfamily	NA|776aa|down_3|NC_015970.1_83509_85837_+	NA	NA|164aa|down_4|NC_015970.1_85865_86357_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|203aa|down_5|NC_015970.1_86527_87136_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|1244aa|down_6|NC_015970.1_87132_90864_-	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|201aa|down_7|NC_015970.1_92695_93298_-	cd05782, DNA_polB_like1_exo, Uncharacterized bacterial subgroup of the DEDDy 3'-5' exonuclease domain of family-B DNA polymerases	cas14j|377aa|down_8|NC_015970.1_93544_94675_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|116aa|down_9|NC_015970.1_94960_95308_+	NA
GCF_000224745.1_ASM22474v1	NC_015970	Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, complete sequence	7	80646-80845	6,7	PILER-CR,CRISPRCasFinder	no	csx1,csx20,cas6,cas2,cas1,cas14j	WYL,c2c9_V-U4,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20,cas6,cas2,cas1,cas14j	Unclear	AGTCGTAATCCCCTTTTCATCGGGTCAAGTTTTCGGAC,GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC	38,37	0	0	NA	NA	NA:NA	2,2	2	TypeV	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA|125aa|up_7|NC_015970.1_73465_73840_-,NA|107aa|up_6|NC_015970.1_73900_74221_-,NA|182aa|up_1|NC_015970.1_79089_79635_-,NA|196aa|up_0|NC_015970.1_80006_80594_-,NA|776aa|down_2|NC_015970.1_83509_85837_+,NA|116aa|down_8|NC_015970.1_94960_95308_+,NA|312aa|down_9|NC_015970.1_95831_96767_+	cas2|94aa|up_9|NC_015970.1_70589_70871_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|533aa|up_8|NC_015970.1_70871_72470_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|125aa|up_7|NC_015970.1_73465_73840_-	NA	NA|107aa|up_6|NC_015970.1_73900_74221_-	NA	NA|123aa|up_5|NC_015970.1_74499_74868_-	PRK06642, PRK06642, single-stranded DNA-binding protein; Provisional	NA|90aa|up_4|NC_015970.1_74875_75145_-	PHA03146, PHA03146, helicase-primase primase subunit; Provisional	NA|679aa|up_3|NC_015970.1_75332_77369_+	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins	NA|491aa|up_2|NC_015970.1_77386_78859_+	sd00006, TPR, Tetratricopeptide repeat	NA|182aa|up_1|NC_015970.1_79089_79635_-	NA	NA|196aa|up_0|NC_015970.1_80006_80594_-	NA	csx1|511aa|down_0|NC_015970.1_81040_82573_-	TIGR02710, conserved_hypothetical_protein, CRISPR-associated protein, TIGR02710 family	NA|211aa|down_1|NC_015970.1_82873_83506_+	smart00487, DEXDc, DEAD-like helicases superfamily	NA|776aa|down_2|NC_015970.1_83509_85837_+	NA	NA|164aa|down_3|NC_015970.1_85865_86357_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|203aa|down_4|NC_015970.1_86527_87136_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|1244aa|down_5|NC_015970.1_87132_90864_-	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|201aa|down_6|NC_015970.1_92695_93298_-	cd05782, DNA_polB_like1_exo, Uncharacterized bacterial subgroup of the DEDDy 3'-5' exonuclease domain of family-B DNA polymerases	cas14j|377aa|down_7|NC_015970.1_93544_94675_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|116aa|down_8|NC_015970.1_94960_95308_+	NA	NA|312aa|down_9|NC_015970.1_95831_96767_+	NA
GCF_000224745.1_ASM22474v1	NC_015970	Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, complete sequence	8	91071-92220	7,8,5	PILER-CR,CRISPRCasFinder,CRT	no	csx1,cas14j	WYL,c2c9_V-U4,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20,cas6,cas2,cas1,cas14j	Unclear	GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC,GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC,GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC	37,37,37	0	0	NA	NA	NA:NA:NA	14,14,14	14	TypeV	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA|182aa|up_7|NC_015970.1_79089_79635_-,NA|196aa|up_6|NC_015970.1_80006_80594_-,NA|776aa|up_3|NC_015970.1_83509_85837_+,NA|116aa|down_2|NC_015970.1_94960_95308_+,NA|312aa|down_3|NC_015970.1_95831_96767_+,NA|179aa|down_4|NC_015970.1_97141_97678_+,NA|163aa|down_8|NC_015970.1_99007_99496_-	NA|679aa|up_9|NC_015970.1_75332_77369_+	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins	NA|491aa|up_8|NC_015970.1_77386_78859_+	sd00006, TPR, Tetratricopeptide repeat	NA|182aa|up_7|NC_015970.1_79089_79635_-	NA	NA|196aa|up_6|NC_015970.1_80006_80594_-	NA	csx1|511aa|up_5|NC_015970.1_81040_82573_-	TIGR02710, conserved_hypothetical_protein, CRISPR-associated protein, TIGR02710 family	NA|211aa|up_4|NC_015970.1_82873_83506_+	smart00487, DEXDc, DEAD-like helicases superfamily	NA|776aa|up_3|NC_015970.1_83509_85837_+	NA	NA|164aa|up_2|NC_015970.1_85865_86357_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|203aa|up_1|NC_015970.1_86527_87136_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|1244aa|up_0|NC_015970.1_87132_90864_-	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|201aa|down_0|NC_015970.1_92695_93298_-	cd05782, DNA_polB_like1_exo, Uncharacterized bacterial subgroup of the DEDDy 3'-5' exonuclease domain of family-B DNA polymerases	cas14j|377aa|down_1|NC_015970.1_93544_94675_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|116aa|down_2|NC_015970.1_94960_95308_+	NA	NA|312aa|down_3|NC_015970.1_95831_96767_+	NA	NA|179aa|down_4|NC_015970.1_97141_97678_+	NA	NA|101aa|down_5|NC_015970.1_97769_98072_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|143aa|down_6|NC_015970.1_98046_98475_+	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs	NA|97aa|down_7|NC_015970.1_98699_98990_-	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|163aa|down_8|NC_015970.1_99007_99496_-	NA	NA|127aa|down_9|NC_015970.1_99875_100256_-	pfam14104, DUF4277, Domain of unknown function (DUF4277)
GCF_000224745.1_ASM22474v1	NC_015970	Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, complete sequence	9	95340-95500	8	PILER-CR	no	csx1,cas14j	WYL,c2c9_V-U4,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20,cas6,cas2,cas1,cas14j	Unclear	AATTCGTACAGTTGATCCGCAAAA	24	0	0	NA	NA	NA	2	2	TypeV	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA|196aa|up_9|NC_015970.1_80006_80594_-,NA|776aa|up_6|NC_015970.1_83509_85837_+,NA|116aa|up_0|NC_015970.1_94960_95308_+,NA|312aa|down_0|NC_015970.1_95831_96767_+,NA|179aa|down_1|NC_015970.1_97141_97678_+,NA|163aa|down_5|NC_015970.1_99007_99496_-	NA|196aa|up_9|NC_015970.1_80006_80594_-	NA	csx1|511aa|up_8|NC_015970.1_81040_82573_-	TIGR02710, conserved_hypothetical_protein, CRISPR-associated protein, TIGR02710 family	NA|211aa|up_7|NC_015970.1_82873_83506_+	smart00487, DEXDc, DEAD-like helicases superfamily	NA|776aa|up_6|NC_015970.1_83509_85837_+	NA	NA|164aa|up_5|NC_015970.1_85865_86357_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|203aa|up_4|NC_015970.1_86527_87136_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|1244aa|up_3|NC_015970.1_87132_90864_-	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|201aa|up_2|NC_015970.1_92695_93298_-	cd05782, DNA_polB_like1_exo, Uncharacterized bacterial subgroup of the DEDDy 3'-5' exonuclease domain of family-B DNA polymerases	cas14j|377aa|up_1|NC_015970.1_93544_94675_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|116aa|up_0|NC_015970.1_94960_95308_+	NA	NA|312aa|down_0|NC_015970.1_95831_96767_+	NA	NA|179aa|down_1|NC_015970.1_97141_97678_+	NA	NA|101aa|down_2|NC_015970.1_97769_98072_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|143aa|down_3|NC_015970.1_98046_98475_+	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs	NA|97aa|down_4|NC_015970.1_98699_98990_-	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|163aa|down_5|NC_015970.1_99007_99496_-	NA	NA|127aa|down_6|NC_015970.1_99875_100256_-	pfam14104, DUF4277, Domain of unknown function (DUF4277)	NA|68aa|down_7|NC_015970.1_100461_100665_-	pfam05168, HEPN, HEPN domain	NA|279aa|down_8|NC_015970.1_100813_101650_+	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|109aa|down_9|NC_015970.1_101641_101968_-	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins
GCF_000224745.1_ASM22474v1	NC_015966	Rhodothermus marinus SG0.5JP17-172, complete genome	1	85116-85208	1	CRISPRCasFinder	no		csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j	Orphan	CGGCGGCCCTTGCAGGTCTCGCAG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA,NA|106aa|down_1|NC_015966.1_88272_88590_+,NA|313aa|down_4|NC_015966.1_92250_93189_-,NA|61aa|down_5|NC_015966.1_93291_93474_+	NA|502aa|up_9|NC_015966.1_70973_72479_-	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|836aa|up_8|NC_015966.1_72731_75239_+	cd06238, M14-like, Peptidase M14-like domain; uncharacterized subgroup	NA|447aa|up_7|NC_015966.1_75242_76583_-	PRK05820, deoA, thymidine phosphorylase; Reviewed	NA|838aa|up_6|NC_015966.1_76584_79098_-	cd02850, E_set_Cellulase_N, N-terminal Early set domain associated with the catalytic domain of cellulase	NA|84aa|up_5|NC_015966.1_79215_79467_-	pfam01197, Ribosomal_L31, Ribosomal protein L31	NA|628aa|up_4|NC_015966.1_79549_81433_-	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|207aa|up_3|NC_015966.1_81685_82306_-	pfam14358, DUF4405, Domain of unknown function (DUF4405)	NA|130aa|up_2|NC_015966.1_82438_82828_-	COG1895, COG1895, Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN [Function unknown]	NA|120aa|up_1|NC_015966.1_82824_83184_-	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins	NA|368aa|up_0|NC_015966.1_83370_84474_+	cd14963, NHL_like_5, Uncharacterized NHL-repeat domain in bacterial proteins	NA|198aa|down_0|NC_015966.1_87598_88192_+	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion]	NA|106aa|down_1|NC_015966.1_88272_88590_+	NA	NA|810aa|down_2|NC_015966.1_88670_91100_-	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain	NA|333aa|down_3|NC_015966.1_91185_92184_-	cd19143, AKR_AKR6C1_2, AKR6C family of aldo-keto reductase (AKR)	NA|313aa|down_4|NC_015966.1_92250_93189_-	NA	NA|61aa|down_5|NC_015966.1_93291_93474_+	NA	NA|922aa|down_6|NC_015966.1_93589_96355_+	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|262aa|down_7|NC_015966.1_96455_97241_+	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|136aa|down_8|NC_015966.1_97242_97650_+	pfam02601, Exonuc_VII_L, Exonuclease VII, large subunit	NA|306aa|down_9|NC_015966.1_97649_98567_+	PRK05561, PRK05561, DNA topoisomerase 4 subunit A
GCF_000224745.1_ASM22474v1	NC_015966	Rhodothermus marinus SG0.5JP17-172, complete genome	2	609528-609636	2	CRISPRCasFinder	no		csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j	Orphan	AGCGGAGTGCCGTCTCGGGTGACGCCACT	29	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA,NA|166aa|down_6|NC_015966.1_616861_617359_+	NA|723aa|up_9|NC_015966.1_591636_593805_+	cd07551, P-type_ATPase_HM_ZosA_PfeT-like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis ZosA/PfeT which transports copper, and perhaps zinc under oxidative stress, and perhaps ferrous iron	NA|330aa|up_8|NC_015966.1_593805_594795_-	COG3292, COG3292, Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]	NA|676aa|up_7|NC_015966.1_595041_597069_+	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism]	NA|83aa|up_6|NC_015966.1_597849_598098_-	pfam03683, UPF0175, Uncharacterized protein family (UPF0175)	NA|276aa|up_5|NC_015966.1_598211_599039_-	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|371aa|up_4|NC_015966.1_599354_600467_+	PRK12608, PRK12608, transcription termination factor Rho; Provisional	NA|246aa|up_3|NC_015966.1_600525_601263_+	PRK00024, PRK00024, DNA repair protein RadC	NA|180aa|up_2|NC_015966.1_601715_602255_+	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases	NA|1701aa|up_1|NC_015966.1_602814_607917_+	cd14256, Dockerin_I, Type I dockerin repeat domain	NA|392aa|up_0|NC_015966.1_608012_609188_+	cd08547, Type_II_cohesin, Type II cohesin domain, interaction partner of dockerin	NA|172aa|down_0|NC_015966.1_610121_610637_+	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|791aa|down_1|NC_015966.1_610676_613049_+	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|290aa|down_2|NC_015966.1_613073_613943_+	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|124aa|down_3|NC_015966.1_614006_614378_-	TIGR03879, Uncharacterized_protein_MJ1053, probable regulatory domain	NA|302aa|down_4|NC_015966.1_614380_615286_-	TIGR03878, thermo_KaiC_2, KaiC domain protein, AF_0795 family	NA|365aa|down_5|NC_015966.1_615556_616651_-	COG1568, COG1568, Predicted methyltransferases [General function prediction only]	NA|166aa|down_6|NC_015966.1_616861_617359_+	NA	NA|132aa|down_7|NC_015966.1_617375_617771_-	pfam08797, HIRAN, HIRAN domain	NA|755aa|down_8|NC_015966.1_617947_620212_+	PRK15098, PRK15098, beta-glucosidase BglX	NA|215aa|down_9|NC_015966.1_620201_620846_-	PRK05419, PRK05419, protein-methionine-sulfoxide reductase heme-binding subunit MsrQ
GCF_000224745.1_ASM22474v1	NC_015966	Rhodothermus marinus SG0.5JP17-172, complete genome	3	707737-707843	3	CRISPRCasFinder	no	Cas14u_CAS-V	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j	Unclear	GGCACGGAGCGTAGCGGAGTGCCGT	25	0	0	NA	NA	NA	1	1	Unclear	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA|199aa|up_4|NC_015966.1_702719_703316_+,NA	NA|116aa|up_9|NC_015966.1_697362_697710_-	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|69aa|up_8|NC_015966.1_697730_697937_-	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|181aa|up_7|NC_015966.1_698066_698609_-	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|663aa|up_6|NC_015966.1_698680_700669_-	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|659aa|up_5|NC_015966.1_700827_702804_+	cd09618, CBM9_like_2, DOMON-like type 9 carbohydrate binding module	NA|199aa|up_4|NC_015966.1_702719_703316_+	NA	NA|219aa|up_3|NC_015966.1_703573_704230_+	cd06559, Endonuclease_V, Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases	NA|392aa|up_2|NC_015966.1_704722_705898_+	pfam13177, DNA_pol3_delta2, DNA polymerase III, delta subunit	NA|322aa|up_1|NC_015966.1_705972_706938_+	COG1774, COG1774, Uncharacterized homolog of PSP1 [Function unknown]	NA|253aa|up_0|NC_015966.1_706945_707704_+	sd00006, TPR, Tetratricopeptide repeat	NA|288aa|down_0|NC_015966.1_708186_709050_+	smart00327, VWA, von Willebrand factor (vWF) type A domain	NA|230aa|down_1|NC_015966.1_709057_709747_+	pfam13672, PP2C_2, Protein phosphatase 2C	NA|429aa|down_2|NC_015966.1_709755_711042_-	PRK15063, PRK15063, isocitrate lyase; Provisional	NA|506aa|down_3|NC_015966.1_711210_712728_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|609aa|down_4|NC_015966.1_712732_714559_+	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase and Choline Kinase family	NA|140aa|down_5|NC_015966.1_714643_715063_-	cd00320, cpn10, Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts	NA|610aa|down_6|NC_015966.1_715106_716936_-	cd11477, SLC5sbd_u1, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain	NA|152aa|down_7|NC_015966.1_717029_717485_-	cd19923, REC_CheY_CheY3, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY3 and similar CheY family proteins	Cas14u_CAS-V|389aa|down_8|NC_015966.1_717670_718837_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|318aa|down_9|NC_015966.1_718819_719773_-	pfam08668, HDOD, HDOD domain
GCF_000224745.1_ASM22474v1	NC_015966	Rhodothermus marinus SG0.5JP17-172, complete genome	4	1339694-1343322	1,4,1	PILER-CR,CRISPRCasFinder,CRT	no	cas7,cas5,cas3,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j	Type III-B,Type III-C,Type III-A,Type III-D	GTTTTAATCGCACCTTTTTGGTATTGAAAT,GTTTTAATCGCACCTTTTTGGTATTGAAAT,GTTTTAATCGCACCTTTTTGGTATTGAAAT	30,30,30	0	0	NA	NA	I-A,II-B,III-A:I-A,II-B,III-A:I-A,II-B,III-A	54,54,54	54	TypeIII-B,TypeIII-C,TypeIII-A,TypeIII-D	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	csx19|147aa|up_6|NC_015966.1_1333363_1333804_+,NA|268aa|down_7|NC_015966.1_1353953_1354757_-,NA|181aa|down_8|NC_015966.1_1354825_1355368_-,NA|104aa|down_9|NC_015966.1_1355542_1355854_-	NA|279aa|up_9|NC_015966.1_1330740_1331577_+	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase	csm3gr7|297aa|up_8|NC_015966.1_1331593_1332484_+	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm3gr7|291aa|up_7|NC_015966.1_1332494_1333367_+	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csx19|147aa|up_6|NC_015966.1_1333363_1333804_+	NA	csm3gr7|328aa|up_5|NC_015966.1_1333790_1334774_+	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	csx1|333aa|up_4|NC_015966.1_1335071_1336070_+	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	csx1|417aa|up_3|NC_015966.1_1336066_1337317_+	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	NA|230aa|up_2|NC_015966.1_1337396_1338086_+	cd05782, DNA_polB_like1_exo, Uncharacterized bacterial subgroup of the DEDDy 3'-5' exonuclease domain of family-B DNA polymerases	cas1|361aa|up_1|NC_015966.1_1338082_1339165_+	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas2|89aa|up_0|NC_015966.1_1339166_1339433_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas10|819aa|down_0|NC_015966.1_1343445_1345902_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|132aa|down_1|NC_015966.1_1345936_1346332_+	pfam03750, Csm2_III-A, Csm2 Type III-A	csm3gr7|268aa|down_2|NC_015966.1_1346334_1347138_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|327aa|down_3|NC_015966.1_1347131_1348112_+	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm5gr7|481aa|down_4|NC_015966.1_1348125_1349568_+	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	csx1|449aa|down_5|NC_015966.1_1349584_1350931_+	TIGR02710, conserved_hypothetical_protein, CRISPR-associated protein, TIGR02710 family	NA|933aa|down_6|NC_015966.1_1351183_1353982_-	pfam13646, HEAT_2, HEAT repeats	NA|268aa|down_7|NC_015966.1_1353953_1354757_-	NA	NA|181aa|down_8|NC_015966.1_1354825_1355368_-	NA	NA|104aa|down_9|NC_015966.1_1355542_1355854_-	NA
GCF_000224745.1_ASM22474v1	NC_015966	Rhodothermus marinus SG0.5JP17-172, complete genome	5	1442301-1444253	2,5,2	PILER-CR,CRISPRCasFinder,CRT	no	Cas14u_CAS-V	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j	Unclear	GTTTTAATCGCACCTTTTTGGTATTGAAAT,ATTTCAATACCAAAAAGGTGCGATTAAAAC,ATTTCAATACCAAAAAGGTGCGATTAAAAC	30,30,30	0	0	NA	NA	I-A,II-B,III-A:I-A,II-B,III-A:I-A,II-B,III-A	29,29,29	29	Unclear	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA,NA	NA|261aa|up_9|NC_015966.1_1428983_1429766_-	pfam05138, PaaA_PaaC, Phenylacetic acid catabolic protein	NA|98aa|up_8|NC_015966.1_1429775_1430069_-	pfam06243, PaaB, Phenylacetic acid degradation B	NA|322aa|up_7|NC_015966.1_1430061_1431027_-	PRK13778, paaA, phenylacetate-CoA oxygenase subunit PaaA; Provisional	NA|899aa|up_6|NC_015966.1_1431217_1433914_+	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|190aa|up_5|NC_015966.1_1433903_1434473_+	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E	NA|434aa|up_4|NC_015966.1_1434515_1435817_+	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|268aa|up_3|NC_015966.1_1435833_1436637_+	cd14963, NHL_like_5, Uncharacterized NHL-repeat domain in bacterial proteins	NA|70aa|up_2|NC_015966.1_1436609_1436819_-	pfam01941, AdoMet_Synthase, S-adenosylmethionine synthetase (AdoMet synthetase)	NA|1157aa|up_1|NC_015966.1_1437045_1440516_+	TIGR04189, gliding_motility-related_protein, cell surface protein SprA	NA|557aa|up_0|NC_015966.1_1440525_1442196_-	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|440aa|down_0|NC_015966.1_1444518_1445838_-	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|391aa|down_1|NC_015966.1_1445945_1447118_+	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|346aa|down_2|NC_015966.1_1447205_1448243_+	PRK09293, PRK09293, class 1 fructose-bisphosphatase	NA|299aa|down_3|NC_015966.1_1448250_1449147_+	TIGR04001, thiol_BshB1, bacillithiol biosynthesis deacetylase BshB1	NA|159aa|down_4|NC_015966.1_1449152_1449629_-	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters	NA|257aa|down_5|NC_015966.1_1449632_1450403_-	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium	NA|398aa|down_6|NC_015966.1_1450824_1452018_+	PRK13915, PRK13915, putative glucosyl-3-phosphoglycerate synthase; Provisional	NA|300aa|down_7|NC_015966.1_1452115_1453015_+	pfam13413, HTH_25, Helix-turn-helix domain	NA|713aa|down_8|NC_015966.1_1453035_1455174_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|89aa|down_9|NC_015966.1_1455243_1455510_+	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain
GCF_000224745.1_ASM22474v1	NC_015966	Rhodothermus marinus SG0.5JP17-172, complete genome	6	1987988-1988814	6,3,3	CRISPRCasFinder,CRT,PILER-CR	no		csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j	Orphan	ATTTCAATACCAAAAAGGTGCGATTAAAAC,ATTTCAATACCAAAAAGGTGCGATTAAAAC,GTTTTAATCGCACCTTTTTGGTATTGAAAT	30,30,30	0	0	NA	NA	I-A,II-B,III-A:I-A,II-B,III-A:I-A,II-B,III-A	12,12,11	12	Orphan	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA,NA	NA|101aa|up_9|NC_015966.1_1977605_1977908_-	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only]	NA|307aa|up_8|NC_015966.1_1978139_1979060_-	pfam14238, DUF4340, Domain of unknown function (DUF4340)	NA|509aa|up_7|NC_015966.1_1979080_1980607_-	TIGR03521, gliding_motility_protein_GldG, gliding-associated putative ABC transporter substrate-binding component GldG	NA|236aa|up_6|NC_015966.1_1980610_1981318_-	TIGR03518, ABC_transporter_permease_protein, gliding motility-associated ABC transporter permease protein GldF	NA|309aa|up_5|NC_015966.1_1981331_1982258_-	TIGR03522, GldA_ABC_ATP, gliding motility-associated ABC transporter ATP-binding subunit GldA	NA|309aa|up_4|NC_015966.1_1983014_1983941_+	pfam04966, OprB, Carbohydrate-selective porin, OprB family	NA|139aa|up_3|NC_015966.1_1984073_1984490_-	pfam18480, DUF5615, Domain of unknown function (DUF5615)	NA|85aa|up_2|NC_015966.1_1984486_1984741_-	pfam04255, DUF433, Protein of unknown function (DUF433)	NA|445aa|up_1|NC_015966.1_1984766_1986101_-	pfam01204, Trehalase, Trehalase	NA|556aa|up_0|NC_015966.1_1986235_1987903_+	PLN02791, PLN02791, Nudix hydrolase homolog	NA|219aa|down_0|NC_015966.1_1989334_1989991_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|321aa|down_1|NC_015966.1_1990003_1990966_+	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional	NA|316aa|down_2|NC_015966.1_1990969_1991917_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|445aa|down_3|NC_015966.1_1991937_1993272_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|313aa|down_4|NC_015966.1_1993268_1994207_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|382aa|down_5|NC_015966.1_1994214_1995360_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|365aa|down_6|NC_015966.1_1995366_1996461_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|270aa|down_7|NC_015966.1_1996475_1997285_-	cd07177, terB_like, tellurium resistance terB-like protein	NA|930aa|down_8|NC_015966.1_1997426_2000216_-	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion]	NA|459aa|down_9|NC_015966.1_2000316_2001693_-	cd05803, PGM_like4, This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes
GCF_000224745.1_ASM22474v1	NC_015966	Rhodothermus marinus SG0.5JP17-172, complete genome	7	2031620-2031764	7	CRISPRCasFinder	no		csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j	Orphan	TGGAGGTGCTGCTGGCCGAGACAGAAAAACGACTGGATCATCGAAT	46	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA,NA|69aa|down_0|NC_015966.1_2032082_2032289_-	NA|376aa|up_9|NC_015966.1_2020102_2021230_+	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT	NA|250aa|up_8|NC_015966.1_2021319_2022069_+	pfam04029, 2-ph_phosp, 2-phosphosulpholactate phosphatase	NA|824aa|up_7|NC_015966.1_2022122_2024594_+	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|156aa|up_6|NC_015966.1_2024610_2025078_-	pfam13588, HSDR_N_2, Type I restriction enzyme R protein N-terminus (HSDR_N)	NA|305aa|up_5|NC_015966.1_2025082_2025997_-	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional	NA|264aa|up_4|NC_015966.1_2026035_2026827_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|693aa|up_3|NC_015966.1_2026953_2029032_+	TIGR02094, Glycogen_phosphorylase, alpha-glucan phosphorylases	NA|128aa|up_2|NC_015966.1_2029101_2029485_-	pfam01355, HIPIP, High potential iron-sulfur protein	NA|98aa|up_1|NC_015966.1_2029577_2029871_-	COG1254, AcyP, Acylphosphatases [Energy production and conversion]	NA|460aa|up_0|NC_015966.1_2029867_2031247_-	cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)	NA|69aa|down_0|NC_015966.1_2032082_2032289_-	NA	NA|477aa|down_1|NC_015966.1_2032338_2033769_-	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion]	NA|197aa|down_2|NC_015966.1_2033781_2034372_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|284aa|down_3|NC_015966.1_2034445_2035297_-	cd07336, M48B_HtpX_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase	NA|107aa|down_4|NC_015966.1_2035411_2035732_-	sd00006, TPR, Tetratricopeptide repeat	NA|271aa|down_5|NC_015966.1_2035746_2036559_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|201aa|down_6|NC_015966.1_2036562_2037165_-	pfam04011, LemA, LemA family	NA|557aa|down_7|NC_015966.1_2037347_2039018_+	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|147aa|down_8|NC_015966.1_2039187_2039628_+	cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)	NA|233aa|down_9|NC_015966.1_2039718_2040417_-	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU
GCF_000224745.1_ASM22474v1	NC_015966	Rhodothermus marinus SG0.5JP17-172, complete genome	8	2235489-2235580	8	CRISPRCasFinder	no		csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j	Orphan	TCGGCATCCACCACACGCCCCCGGATCGTAC	31	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA|183aa|up_5|NC_015966.1_2228509_2229058_-,NA|149aa|up_3|NC_015966.1_2230486_2230933_-,NA|442aa|up_2|NC_015966.1_2231018_2232344_-,NA	NA|1151aa|up_9|NC_015966.1_2222207_2225660_-	cd03678, MM_CoA_mutase_1, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, unknown subfamily 1; composed of uncharacterized bacterial proteins containing a C-terminal MCM domain	NA|299aa|up_8|NC_015966.1_2226109_2227006_-	PRK08321, PRK08321, 1,4-dihydroxy-2-naphthoyl-CoA synthase	NA|209aa|up_7|NC_015966.1_2227080_2227707_-	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism]	NA|210aa|up_6|NC_015966.1_2227780_2228410_-	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|183aa|up_5|NC_015966.1_2228509_2229058_-	NA	NA|454aa|up_4|NC_015966.1_2229066_2230428_-	PRK14902, PRK14902, 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA|149aa|up_3|NC_015966.1_2230486_2230933_-	NA	NA|442aa|up_2|NC_015966.1_2231018_2232344_-	NA	NA|384aa|up_1|NC_015966.1_2232363_2233515_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|448aa|up_0|NC_015966.1_2233370_2234714_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|519aa|down_0|NC_015966.1_2235764_2237321_-	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|327aa|down_1|NC_015966.1_2237938_2238919_-	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase	NA|313aa|down_2|NC_015966.1_2239047_2239986_+	cd01339, LDH-like_MDH, L-lactate dehydrogenase-like malate dehydrogenase proteins	NA|312aa|down_3|NC_015966.1_2240111_2241047_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|983aa|down_4|NC_015966.1_2241052_2244001_-	pfam15902, Sortilin-Vps10, Sortilin, neurotensin receptor 3,	NA|155aa|down_5|NC_015966.1_2244079_2244544_+	COG3339, COG3339, Uncharacterized conserved protein [Function unknown]	NA|130aa|down_6|NC_015966.1_2244540_2244930_+	PRK14222, PRK14222, fluoride efflux transporter CrcB	NA|115aa|down_7|NC_015966.1_2244926_2245271_+	pfam02641, DUF190, Uncharacterized ACR, COG1993	NA|545aa|down_8|NC_015966.1_2245236_2246871_+	cd08015, M28_like, M28 Zn-peptidase-like; uncharacterized subfamily	NA|374aa|down_9|NC_015966.1_2247118_2248240_-	pfam00924, MS_channel, Mechanosensitive ion channel
GCF_000224745.1_ASM22474v1	NC_015966	Rhodothermus marinus SG0.5JP17-172, complete genome	9	2600014-2600099	9	CRISPRCasFinder	no		csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j	Orphan	GAACGTTCCGGCGCCGAGGTCCG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,Cas14u_CAS-V,cas3,DinG,cas3HD,WYL,cas6,cas8b1,cas7,cas5,cas4,cas10,csm3gr7,csx10gr5,csm2gr11,csx19,csx1,cas1,cas2,csm4gr5,csm5gr7,cas14j,c2c9_V-U4,csx20	NA|157aa|up_7|NC_015966.1_2593501_2593972_-,NA|168aa|up_4|NC_015966.1_2594999_2595503_-,NA|536aa|up_0|NC_015966.1_2598083_2599691_-,NA	NA|118aa|up_9|NC_015966.1_2592705_2593059_+	COG0579, COG0579, Predicted dehydrogenase [General function prediction only]	NA|126aa|up_8|NC_015966.1_2593055_2593433_-	COG2363, COG2363, Uncharacterized small membrane protein [Function unknown]	NA|157aa|up_7|NC_015966.1_2593501_2593972_-	NA	NA|153aa|up_6|NC_015966.1_2594014_2594473_-	pfam02410, RsfS, Ribosomal silencing factor during starvation	NA|157aa|up_5|NC_015966.1_2594494_2594965_-	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|168aa|up_4|NC_015966.1_2594999_2595503_-	NA	NA|340aa|up_3|NC_015966.1_2595660_2596680_+	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	NA|122aa|up_2|NC_015966.1_2596703_2597069_+	pfam01817, CM_2, Chorismate mutase type II	NA|348aa|up_1|NC_015966.1_2597065_2598109_+	pfam02618, YceG, YceG-like family	NA|536aa|up_0|NC_015966.1_2598083_2599691_-	NA	NA|497aa|down_0|NC_015966.1_2601438_2602929_+	PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional	NA|815aa|down_1|NC_015966.1_2603049_2605494_+	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain	NA|295aa|down_2|NC_015966.1_2605556_2606441_-	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|218aa|down_3|NC_015966.1_2606522_2607176_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|343aa|down_4|NC_015966.1_2607252_2608281_-	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)	NA|215aa|down_5|NC_015966.1_2608299_2608944_-	PRK06552, PRK06552, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional	NA|403aa|down_6|NC_015966.1_2608950_2610159_-	PRK15072, PRK15072, D-galactonate dehydratase family protein	NA|434aa|down_7|NC_015966.1_2610185_2611487_-	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]	NA|171aa|down_8|NC_015966.1_2611499_2612012_-	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism]	NA|326aa|down_9|NC_015966.1_2612013_2612991_-	cd13671, PBP2_TRAP_SBP_like_3, Uncharacterized substrate-binding protein of the Tripartite ATP-independent  Periplasmic transporter family; the type 2 periplasmic-binding protein fold
